RNA–Protein interactions for RNA: ENST00000591877.1

VMP1-213, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 791 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-213ENST00000591877 PDE2AO00408 941 aaPredicted RBP9.3□□□□□ -0.92
VMP1-213ENST00000591877 FBXO24O75426 580 aa9.3□□□□□ -0.92
VMP1-213ENST00000591877 BCAR3O75815 825 aa9.3□□□□□ -0.92
VMP1-213ENST00000591877 SSBP05455 408 aaKnown RBP eCLIP9.3□□□□□ -0.92
VMP1-213ENST00000591877 UBTFL1P0CB47 393 aaPredicted RBP9.3□□□□□ -0.92
VMP1-213ENST00000591877 GARTP22102 1010 aa9.3□□□□□ -0.92
VMP1-213ENST00000591877 MFSD14BQ5SR56 506 aa9.3□□□□□ -0.92
VMP1-213ENST00000591877 INTS3Q68E01 1043 aaKnown RBP9.3□□□□□ -0.92
VMP1-213ENST00000591877 APOBEC3FQ8IUX4 373 aaKnown RBP9.3□□□□□ -0.92
VMP1-213ENST00000591877 ARHGAP45Q92619 1136 aa9.3□□□□□ -0.92
VMP1-213ENST00000591877 NSUN5Q96P11 429 aaKnown RBP9.3□□□□□ -0.92
VMP1-213ENST00000591877 PBX4Q9BYU1 374 aa9.3□□□□□ -0.92
VMP1-213ENST00000591877 DEFB129Q9H1M3 183 aa9.3□□□□□ -0.92
VMP1-213ENST00000591877 ZSWIM4Q9H7M6 989 aa9.3□□□□□ -0.92
VMP1-213ENST00000591877 LRRFIP2Q9Y608 721 aaKnown RBP9.3□□□□□ -0.92
VMP1-213ENST00000591877 OTOFQ9HC10 1997 aa9.3□□□□□ -0.92
VMP1-213ENST00000591877 ENC1O14682 589 aa9.29□□□□□ -0.92
VMP1-213ENST00000591877 CA12O43570 354 aa9.29□□□□□ -0.92
VMP1-213ENST00000591877 DEAF1O75398 565 aaPredicted RBP9.29□□□□□ -0.92
VMP1-213ENST00000591877 CELA3AP09093 270 aa9.29□□□□□ -0.92
VMP1-213ENST00000591877 ACPPP15309 386 aa9.29□□□□□ -0.92
VMP1-213ENST00000591877 NASPP49321 788 aaPredicted RBP9.29□□□□□ -0.92
VMP1-213ENST00000591877 GP2P55259 537 aaKnown RBP9.29□□□□□ -0.92
VMP1-213ENST00000591877 PRKG1Q13976 671 aa9.29□□□□□ -0.92
VMP1-213ENST00000591877 FBXL19Q6PCT2 694 aa9.29□□□□□ -0.92
VMP1-213ENST00000591877 DZIP1LQ8IYY4 767 aaKnown RBP9.29□□□□□ -0.92
VMP1-213ENST00000591877 MKL1Q969V6 931 aa9.29□□□□□ -0.92
VMP1-213ENST00000591877 LRRC3Q9BY71 257 aa9.29□□□□□ -0.92
VMP1-213ENST00000591877 RBSNQ9H1K0 784 aa9.29□□□□□ -0.92
VMP1-213ENST00000591877 AKTIPQ9H8T0 292 aa9.29□□□□□ -0.92
VMP1-213ENST00000591877 RNF186Q9NXI6 227 aa9.29□□□□□ -0.92
VMP1-213ENST00000591877 PA2G4Q9UQ80 394 aaKnown RBP9.29□□□□□ -0.92
VMP1-213ENST00000591877 EFR3BQ9Y2G0 817 aa9.29□□□□□ -0.92
VMP1-213ENST00000591877 SAMM50Q9Y512 469 aa9.29□□□□□ -0.92
VMP1-213ENST00000591877 KIF16BQ96L93 1317 aa9.29□□□□□ -0.92
VMP1-213ENST00000591877 CIAO1O76071 339 aa9.28□□□□□ -0.92
VMP1-213ENST00000591877 PF4P02776 101 aa9.28□□□□□ -0.92
VMP1-213ENST00000591877 TRIM27P14373 513 aa9.28□□□□□ -0.92
VMP1-213ENST00000591877 NF2P35240 595 aa9.28□□□□□ -0.92
VMP1-213ENST00000591877 CRKP46108 304 aa9.28□□□□□ -0.92
VMP1-213ENST00000591877 HNRNPUQ00839 825 aaKnown RBP eCLIP9.28□□□□□ -0.92
VMP1-213ENST00000591877 CHAF1AQ13111 956 aaPredicted RBP9.28□□□□□ -0.92
VMP1-213ENST00000591877 SERINC3Q13530 473 aa9.28□□□□□ -0.92
VMP1-213ENST00000591877 CAMK2GQ13555 558 aaPredicted RBP9.28□□□□□ -0.92
VMP1-213ENST00000591877 PUM3Q15397 648 aaKnown RBP9.28□□□□□ -0.92
VMP1-213ENST00000591877 CAVIN4Q5BKX8 364 aa9.28□□□□□ -0.92
VMP1-213ENST00000591877 SNAP47Q5SQN1 464 aa9.28□□□□□ -0.92
VMP1-213ENST00000591877 PERM1Q5SV97 790 aa9.28□□□□□ -0.92
VMP1-213ENST00000591877 NBPF12Q5TAG4 269 aaPredicted RBP9.28□□□□□ -0.92
VMP1-213ENST00000591877 TTBK2Q6IQ55 1244 aa9.28□□□□□ -0.92
VMP1-213ENST00000591877 SIL1Q9H173 461 aa9.28□□□□□ -0.92
VMP1-213ENST00000591877 TDRD3Q9H7E2 651 aaKnown RBP9.28□□□□□ -0.92
VMP1-213ENST00000591877 ZNF70Q9UC06 446 aaPredicted RBP9.28□□□□□ -0.92
VMP1-213ENST00000591877 TRPA1O75762 1119 aa9.27□□□□□ -0.93
VMP1-213ENST00000591877 IFIT1P09914 478 aaKnown RBP9.27□□□□□ -0.93
VMP1-213ENST00000591877 RBM5P52756 815 aaKnown RBP eCLIP9.27□□□□□ -0.93
VMP1-213ENST00000591877 PPP2R3AQ06190 1150 aa9.27□□□□□ -0.93
VMP1-213ENST00000591877 RASA3Q14644 834 aa9.27□□□□□ -0.93
VMP1-213ENST00000591877 MAP3K11Q16584 847 aa9.27□□□□□ -0.93
VMP1-213ENST00000591877 SPRED3Q2MJR0 410 aa9.27□□□□□ -0.93
VMP1-213ENST00000591877 ATF7IPQ6VMQ6 1270 aa9.27□□□□□ -0.93
VMP1-213ENST00000591877 SLITRK4Q8IW52 837 aa9.27□□□□□ -0.93
VMP1-213ENST00000591877 TRIM42Q8IWZ5 723 aa9.27□□□□□ -0.93
VMP1-213ENST00000591877 LPIN2Q92539 896 aa9.27□□□□□ -0.93
VMP1-213ENST00000591877 VEZTQ9HBM0 779 aa9.27□□□□□ -0.93
VMP1-213ENST00000591877 GINM1Q9NU53 330 aa9.27□□□□□ -0.93
VMP1-213ENST00000591877 TMEM39AQ9NV64 488 aa9.27□□□□□ -0.93
VMP1-213ENST00000591877 SAGE1Q9NXZ1 904 aa9.27□□□□□ -0.93
VMP1-213ENST00000591877 ANGEL1Q9UNK9 670 aaKnown RBP9.27□□□□□ -0.93
VMP1-213ENST00000591877 PPP2R3BQ9Y5P8 575 aa9.27□□□□□ -0.93
VMP1-213ENST00000591877 ZBTB42B2RXF5 422 aa9.26□□□□□ -0.93
VMP1-213ENST00000591877 MYO1BO43795 1136 aa9.26□□□□□ -0.93
VMP1-213ENST00000591877 USP2O75604 605 aaPredicted RBP9.26□□□□□ -0.93
VMP1-213ENST00000591877 SMNDC1O75940 238 aaKnown RBP eCLIP9.26□□□□□ -0.93
VMP1-213ENST00000591877 TGFB1P01137 390 aa9.26□□□□□ -0.93
VMP1-213ENST00000591877 GHRHP01286 108 aa9.26□□□□□ -0.93
VMP1-213ENST00000591877 SLC5A1P13866 664 aa9.26□□□□□ -0.93
VMP1-213ENST00000591877 TM4SF4P48230 202 aa9.26□□□□□ -0.93
VMP1-213ENST00000591877 MLLT1Q03111 559 aaPredicted RBP9.26□□□□□ -0.93
VMP1-213ENST00000591877 APOBRQ0VD83 1088 aa9.26□□□□□ -0.93
VMP1-213ENST00000591877 MTX1Q13505 466 aa9.26□□□□□ -0.93
VMP1-213ENST00000591877 ATP2B3Q16720 1220 aa9.26□□□□□ -0.93
VMP1-213ENST00000591877 PCNX4Q63HM2 1172 aa9.26□□□□□ -0.93
VMP1-213ENST00000591877 SCARA3Q6AZY7 606 aa9.26□□□□□ -0.93
VMP1-213ENST00000591877 ZNF746Q6NUN9 644 aaPredicted RBP9.26□□□□□ -0.93
VMP1-213ENST00000591877 ELMSAN1Q6PJG2 1045 aa9.26□□□□□ -0.93
VMP1-213ENST00000591877 ARMC9Q7Z3E5 817 aa9.26□□□□□ -0.93
VMP1-213ENST00000591877 TBC1D22AQ8WUA7 517 aa9.26□□□□□ -0.93
VMP1-213ENST00000591877 BSNDQ8WZ55 320 aa9.26□□□□□ -0.93
VMP1-213ENST00000591877 FRAT1Q92837 279 aaPredicted RBP9.26□□□□□ -0.93
VMP1-213ENST00000591877 ABHD8Q96I13 439 aa9.26□□□□□ -0.93
VMP1-213ENST00000591877 CLMNQ96JQ2 1002 aa9.26□□□□□ -0.93
VMP1-213ENST00000591877 TEPSINQ96N21 525 aa9.26□□□□□ -0.93
VMP1-213ENST00000591877 CLEC4MQ9H2X3 399 aaPredicted RBP9.26□□□□□ -0.93
VMP1-213ENST00000591877 PIF1Q9H611 641 aa9.26□□□□□ -0.93
VMP1-213ENST00000591877 FRRS1LQ9P0K9 344 aa9.26□□□□□ -0.93
VMP1-213ENST00000591877 TLR6Q9Y2C9 796 aa9.26□□□□□ -0.93
VMP1-213ENST00000591877 MYH2Q9UKX2 1941 aa9.25□□□□□ -0.93
VMP1-213ENST00000591877 METTL12A8MUP2 240 aa9.25□□□□□ -0.93
VMP1-213ENST00000591877 DLL1O00548 723 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms