RNA–Protein interactions for RNA: ENST00000591622.1

CIRBP-233, Transcript of cold inducible RNA binding protein, humanhuman

TSL 4

Gene CIRBP, Length 548 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-233ENST00000591622 MYSM1Q5VVJ2 828 aa18.82■□□□□ 0.6
CIRBP-233ENST00000591622 IL17RAQ96F46 866 aa18.82■□□□□ 0.6
CIRBP-233ENST00000591622 RNF26Q9BY78 433 aaPredicted RBP18.82■□□□□ 0.6
CIRBP-233ENST00000591622 GLT8D2Q9H1C3 349 aa18.82■□□□□ 0.6
CIRBP-233ENST00000591622 ALDH8A1Q9H2A2 487 aaPredicted RBP18.82■□□□□ 0.6
CIRBP-233ENST00000591622 FIBPO43427 364 aa18.81■□□□□ 0.6
CIRBP-233ENST00000591622 GGPS1O95749 300 aa18.81■□□□□ 0.6
CIRBP-233ENST00000591622 AKAP17AQ02040 695 aaKnown RBP18.81■□□□□ 0.6
CIRBP-233ENST00000591622 DGKDQ16760 1214 aa18.81■□□□□ 0.6
CIRBP-233ENST00000591622 TDHQ8IZJ6 230 aa18.81■□□□□ 0.6
CIRBP-233ENST00000591622 PPTC7Q8NI37 304 aa18.81■□□□□ 0.6
CIRBP-233ENST00000591622 TIMP1P01033 207 aa18.8■□□□□ 0.6
CIRBP-233ENST00000591622 FOSP01100 380 aaPredicted RBP18.8■□□□□ 0.6
CIRBP-233ENST00000591622 FXR1P51114 621 aaKnown RBP eCLIP18.8■□□□□ 0.6
CIRBP-233ENST00000591622 NBPF20Q3BBV1 942 aa18.8■□□□□ 0.6
CIRBP-233ENST00000591622 NLRX1Q86UT6 975 aa18.8■□□□□ 0.6
CIRBP-233ENST00000591622 CCDC12Q8WUD4 166 aaPredicted RBP18.8■□□□□ 0.6
CIRBP-233ENST00000591622 SPATA33Q96N06 139 aa18.8■□□□□ 0.6
CIRBP-233ENST00000591622 SLC26A6Q9BXS9 759 aa18.8■□□□□ 0.6
CIRBP-233ENST00000591622 TRPV6Q9H1D0 765 aa18.8■□□□□ 0.6
CIRBP-233ENST00000591622 EHMT1Q9H9B1 1298 aa18.8■□□□□ 0.6
CIRBP-233ENST00000591622 MLXIPQ9HAP2 919 aa18.8■□□□□ 0.6
CIRBP-233ENST00000591622 KIAA1217Q5T5P2 1943 aa18.8■□□□□ 0.6
CIRBP-233ENST00000591622 SORBS3O60504 671 aa18.79■□□□□ 0.6
CIRBP-233ENST00000591622 B4GALT4O60513 344 aa18.79■□□□□ 0.6
CIRBP-233ENST00000591622 PPFIA3O75145 1194 aa18.79■□□□□ 0.6
CIRBP-233ENST00000591622 PPFIA4O75335 1185 aa18.79■□□□□ 0.6
CIRBP-233ENST00000591622 HOXD8P13378 290 aaPredicted RBP18.79■□□□□ 0.6
CIRBP-233ENST00000591622 STK3Q13188 491 aa18.79■□□□□ 0.6
CIRBP-233ENST00000591622 SEMA3FQ13275 785 aa18.79■□□□□ 0.6
CIRBP-233ENST00000591622 NEDD9Q14511 834 aa18.79■□□□□ 0.6
CIRBP-233ENST00000591622 HSDL1Q3SXM5 330 aa18.79■□□□□ 0.6
CIRBP-233ENST00000591622 NFRKBQ6P4R8 1299 aa18.79■□□□□ 0.6
CIRBP-233ENST00000591622 ZMYND12Q9H0C1 365 aa18.79■□□□□ 0.6
CIRBP-233ENST00000591622 BCAS3Q9H6U6 928 aa18.79■□□□□ 0.6
CIRBP-233ENST00000591622 ESYT2A0FGR8 921 aa18.78■□□□□ 0.6
CIRBP-233ENST00000591622 CPLX1O14810 134 aa18.78■□□□□ 0.6
CIRBP-233ENST00000591622 ITGB5P18084 799 aa18.78■□□□□ 0.6
CIRBP-233ENST00000591622 CLK2P49760 499 aaKnown RBP18.78■□□□□ 0.6
CIRBP-233ENST00000591622 PTPN11Q06124 597 aaPredicted RBP18.78■□□□□ 0.6
CIRBP-233ENST00000591622 AP3B2Q13367 1082 aa18.78■□□□□ 0.6
CIRBP-233ENST00000591622 FAM47CQ5HY64 1035 aa18.78■□□□□ 0.6
CIRBP-233ENST00000591622 TRIM22Q8IYM9 498 aa18.78■□□□□ 0.6
CIRBP-233ENST00000591622 KAT2BQ92831 832 aa18.78■□□□□ 0.6
CIRBP-233ENST00000591622 GPRASP2Q96D09 838 aa18.78■□□□□ 0.6
CIRBP-233ENST00000591622 CDHR1Q96JP9 859 aa18.78■□□□□ 0.6
CIRBP-233ENST00000591622 SENP7Q9BQF6 1050 aa18.78■□□□□ 0.6
CIRBP-233ENST00000591622 C6orf50Q9HD87 102 aa18.78■□□□□ 0.6
CIRBP-233ENST00000591622 TMEM260Q9NX78 707 aa18.78■□□□□ 0.6
CIRBP-233ENST00000591622 UBIAD1Q9Y5Z9 338 aa18.78■□□□□ 0.6
CIRBP-233ENST00000591622 LTBP2Q14767 1821 aa18.78■□□□□ 0.6
CIRBP-233ENST00000591622 SUPT20HL2P0C7V6 817 aa18.77■□□□□ 0.6
CIRBP-233ENST00000591622 AK2P54819 239 aa18.77■□□□□ 0.6
CIRBP-233ENST00000591622 CHMP4BP1P59074 171 aa18.77■□□□□ 0.6
CIRBP-233ENST00000591622 SSRP1Q08945 709 aaKnown RBP18.77■□□□□ 0.6
CIRBP-233ENST00000591622 ANKRD1Q15327 319 aa18.77■□□□□ 0.6
CIRBP-233ENST00000591622 C8orf34Q49A92 452 aa18.77■□□□□ 0.6
CIRBP-233ENST00000591622 MFSD5Q6N075 450 aa18.77■□□□□ 0.6
CIRBP-233ENST00000591622 CPLX2Q6PUV4 134 aaKnown RBP18.77■□□□□ 0.6
CIRBP-233ENST00000591622 METTL7BQ6UX53 244 aa18.77■□□□□ 0.6
CIRBP-233ENST00000591622 CYFIP1Q7L576 1253 aa18.77■□□□□ 0.6
CIRBP-233ENST00000591622 PGBD1Q96JS3 809 aa18.77■□□□□ 0.6
CIRBP-233ENST00000591622 ANO3Q9BYT9 981 aa18.77■□□□□ 0.6
CIRBP-233ENST00000591622 TRMT13Q9NUP7 481 aaKnown RBP18.77■□□□□ 0.6
CIRBP-233ENST00000591622 TPCN1Q9ULQ1 816 aa18.77■□□□□ 0.6
CIRBP-233ENST00000591622 MAFGO15525 162 aa18.76■□□□□ 0.59
CIRBP-233ENST00000591622 F2P00734 622 aa18.76■□□□□ 0.59
CIRBP-233ENST00000591622 GNA11P29992 359 aa18.76■□□□□ 0.59
CIRBP-233ENST00000591622 FPGSQ05932 587 aa18.76■□□□□ 0.59
CIRBP-233ENST00000591622 MTMR1Q13613 665 aa18.76■□□□□ 0.59
CIRBP-233ENST00000591622 MCTP2Q6DN12 878 aa18.76■□□□□ 0.59
CIRBP-233ENST00000591622 GIMAP8Q8ND71 665 aaPredicted RBP18.76■□□□□ 0.59
CIRBP-233ENST00000591622 PPP1R13LQ8WUF5 828 aa18.76■□□□□ 0.59
CIRBP-233ENST00000591622 PPP1R12CQ9BZL4 782 aa18.76■□□□□ 0.59
CIRBP-233ENST00000591622 HIPK3Q9H422 1215 aa18.76■□□□□ 0.59
CIRBP-233ENST00000591622 JADE2Q9NQC1 790 aa18.76■□□□□ 0.59
CIRBP-233ENST00000591622 NOP56O00567 594 aaKnown RBP18.75■□□□□ 0.59
CIRBP-233ENST00000591622 PFKFB2O60825 505 aa18.75■□□□□ 0.59
CIRBP-233ENST00000591622 ATP9AO75110 1047 aa18.75■□□□□ 0.59
CIRBP-233ENST00000591622 ZNF286BP0CG31 522 aa18.75■□□□□ 0.59
CIRBP-233ENST00000591622 SREBF1P36956 1147 aa18.75■□□□□ 0.59
CIRBP-233ENST00000591622 LRIT3Q3SXY7 679 aa18.75■□□□□ 0.59
CIRBP-233ENST00000591622 JAKMIP3Q5VZ66 844 aa18.75■□□□□ 0.59
CIRBP-233ENST00000591622 SESTD1Q86VW0 696 aa18.75■□□□□ 0.59
CIRBP-233ENST00000591622 REXO1Q8N1G1 1221 aaKnown RBP18.75■□□□□ 0.59
CIRBP-233ENST00000591622 CCDC148Q8NFR7 591 aa18.75■□□□□ 0.59
CIRBP-233ENST00000591622 MXRA8Q9BRK3 442 aa18.75■□□□□ 0.59
CIRBP-233ENST00000591622 KATNAL1Q9BW62 490 aa18.75■□□□□ 0.59
CIRBP-233ENST00000591622 SLKQ9H2G2 1235 aaPredicted RBP18.75■□□□□ 0.59
CIRBP-233ENST00000591622 SH3GLB2Q9NR46 395 aa18.75■□□□□ 0.59
CIRBP-233ENST00000591622 VPS54Q9P1Q0 977 aa18.75■□□□□ 0.59
CIRBP-233ENST00000591622 HAS3O00219 553 aa18.74■□□□□ 0.59
CIRBP-233ENST00000591622 ADAMTS3O15072 1205 aa18.74■□□□□ 0.59
CIRBP-233ENST00000591622 DEXIO95424 95 aa18.74■□□□□ 0.59
CIRBP-233ENST00000591622 KCNA2P16389 499 aa18.74■□□□□ 0.59
CIRBP-233ENST00000591622 CYP2C18P33260 490 aa18.74■□□□□ 0.59
CIRBP-233ENST00000591622 PSEN2P49810 448 aa18.74■□□□□ 0.59
CIRBP-233ENST00000591622 NEK4P51957 841 aa18.74■□□□□ 0.59
CIRBP-233ENST00000591622 EPHB4P54760 987 aa18.74■□□□□ 0.59
CIRBP-233ENST00000591622 SCRN1Q12765 414 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms