RNA–Protein interactions for RNA: ENST00000591515.6

LSM7-206, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM7, Length 710 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-206ENST00000591515 TMEM63BQ5T3F8 832 aa26.69■■□□□ 1.86
LSM7-206ENST00000591515 TMTC3Q6ZXV5 915 aa26.69■■□□□ 1.86
LSM7-206ENST00000591515 RAB11FIP4Q86YS3 637 aa26.69■■□□□ 1.86
LSM7-206ENST00000591515 KHSRPQ92945 711 aaKnown RBP eCLIP26.69■■□□□ 1.86
LSM7-206ENST00000591515 MAF1Q9H063 256 aa26.69■■□□□ 1.86
LSM7-206ENST00000591515 PDGFCQ9NRA1 345 aa26.69■■□□□ 1.86
LSM7-206ENST00000591515 COG5Q9UP83 839 aa26.69■■□□□ 1.86
LSM7-206ENST00000591515 SCN10AQ9Y5Y9 1956 aa26.69■■□□□ 1.86
LSM7-206ENST00000591515 ASB14A6NK59 587 aa26.68■■□□□ 1.86
LSM7-206ENST00000591515 ZEB2O60315 1214 aa26.68■■□□□ 1.86
LSM7-206ENST00000591515 ARHGEF15O94989 841 aa26.68■■□□□ 1.86
LSM7-206ENST00000591515 RABEP1Q15276 862 aa26.68■■□□□ 1.86
LSM7-206ENST00000591515 CPLX2Q6PUV4 134 aaKnown RBP26.68■■□□□ 1.86
LSM7-206ENST00000591515 HOMER1Q86YM7 354 aa26.68■■□□□ 1.86
LSM7-206ENST00000591515 MTMR8Q96EF0 704 aa26.68■■□□□ 1.86
LSM7-206ENST00000591515 C11orf16Q9NQ32 467 aa26.68■■□□□ 1.86
LSM7-206ENST00000591515 NID2Q14112 1375 aa26.68■■□□□ 1.86
LSM7-206ENST00000591515 TRIP12Q14669 1992 aaPredicted RBP26.67■■□□□ 1.86
LSM7-206ENST00000591515 PNMA6FA0A0J9YX94 578 aa26.67■■□□□ 1.86
LSM7-206ENST00000591515 PFKMP08237 780 aa26.67■■□□□ 1.86
LSM7-206ENST00000591515 FBXO16Q8IX29 292 aaPredicted RBP26.67■■□□□ 1.86
LSM7-206ENST00000591515 TRMT13Q9NUP7 481 aaKnown RBP26.67■■□□□ 1.86
LSM7-206ENST00000591515 MRPL11Q9Y3B7 192 aaKnown RBP26.67■■□□□ 1.86
LSM7-206ENST00000591515 CYP2C9P11712 490 aa26.66■■□□□ 1.86
LSM7-206ENST00000591515 TAPT1Q6NXT6 567 aa26.66■■□□□ 1.86
LSM7-206ENST00000591515 DEFB128Q7Z7B8 93 aa26.66■■□□□ 1.86
LSM7-206ENST00000591515 PIGSQ96S52 555 aa26.66■■□□□ 1.86
LSM7-206ENST00000591515 PLEKHA8P1O95397 391 aa26.65■■□□□ 1.86
LSM7-206ENST00000591515 PDIA3P30101 505 aaKnown RBP26.65■■□□□ 1.86
LSM7-206ENST00000591515 USH1GQ495M9 461 aa26.65■■□□□ 1.86
LSM7-206ENST00000591515 EEPD1Q7L9B9 569 aa26.65■■□□□ 1.86
LSM7-206ENST00000591515 MCF2L2Q86YR7 1114 aa26.65■■□□□ 1.86
LSM7-206ENST00000591515 SRBD1Q8N5C6 995 aaKnown RBP26.65■■□□□ 1.86
LSM7-206ENST00000591515 ARNTL2Q8WYA1 636 aa26.65■■□□□ 1.86
LSM7-206ENST00000591515 TBC1D32Q96NH3 1257 aa26.65■■□□□ 1.86
LSM7-206ENST00000591515 CPLX1O14810 134 aa26.64■■□□□ 1.86
LSM7-206ENST00000591515 CYTH3O43739 400 aa26.64■■□□□ 1.86
LSM7-206ENST00000591515 ST18O60284 1047 aa26.64■■□□□ 1.86
LSM7-206ENST00000591515 AK2P54819 239 aa26.64■■□□□ 1.86
LSM7-206ENST00000591515 AKAP17AQ02040 695 aaKnown RBP26.64■■□□□ 1.86
LSM7-206ENST00000591515 TAP1Q03518 808 aa26.64■■□□□ 1.86
LSM7-206ENST00000591515 Q9Y3F1 56 aa26.64■■□□□ 1.86
LSM7-206ENST00000591515 PCDHA1Q9Y5I3 950 aa26.64■■□□□ 1.86
LSM7-206ENST00000591515 FAM86C2PA6NEL3 165 aa26.63■■□□□ 1.85
LSM7-206ENST00000591515 GPR37L1O60883 481 aa26.63■■□□□ 1.85
LSM7-206ENST00000591515 IQSEC1Q6DN90 963 aa26.63■■□□□ 1.85
LSM7-206ENST00000591515 HLA-CQ95604 372 aa26.63■■□□□ 1.85
LSM7-206ENST00000591515 SLC9A7Q96T83 725 aa26.63■■□□□ 1.85
LSM7-206ENST00000591515 SLKQ9H2G2 1235 aaPredicted RBP26.63■■□□□ 1.85
LSM7-206ENST00000591515 MYH6P13533 1939 aa26.63■■□□□ 1.85
LSM7-206ENST00000591515 NSMFQ6X4W1 530 aa26.62■■□□□ 1.85
LSM7-206ENST00000591515 CCDC82Q8N4S0 544 aa26.62■■□□□ 1.85
LSM7-206ENST00000591515 SAMD3Q8N6K7 520 aa26.62■■□□□ 1.85
LSM7-206ENST00000591515 RGS22Q8NE09 1264 aa26.62■■□□□ 1.85
LSM7-206ENST00000591515 hCG_1984214I3L0E3 225 aa26.61■■□□□ 1.85
LSM7-206ENST00000591515 CDKL5O76039 1030 aa26.61■■□□□ 1.85
LSM7-206ENST00000591515 SUPT20HL2P0C7V6 817 aa26.61■■□□□ 1.85
LSM7-206ENST00000591515 GRB10Q13322 594 aa26.61■■□□□ 1.85
LSM7-206ENST00000591515 SPRED2Q7Z698 418 aa26.61■■□□□ 1.85
LSM7-206ENST00000591515 ZNF713Q8N859 430 aaPredicted RBP26.61■■□□□ 1.85
LSM7-206ENST00000591515 PIBF1Q8WXW3 757 aa26.61■■□□□ 1.85
LSM7-206ENST00000591515 ACTN1P12814 892 aa26.6■■□□□ 1.85
LSM7-206ENST00000591515 CDC27P30260 824 aa26.6■■□□□ 1.85
LSM7-206ENST00000591515 ADD1P35611 737 aaKnown RBP26.6■■□□□ 1.85
LSM7-206ENST00000591515 CCT2P78371 535 aaKnown RBP26.6■■□□□ 1.85
LSM7-206ENST00000591515 RNF207Q6ZRF8 634 aa26.6■■□□□ 1.85
LSM7-206ENST00000591515 TRIM22Q8IYM9 498 aa26.6■■□□□ 1.85
LSM7-206ENST00000591515 CMTR1Q8N1G2 835 aaKnown RBP26.6■■□□□ 1.85
LSM7-206ENST00000591515 MPHOSPH6Q99547 160 aaKnown RBP26.6■■□□□ 1.85
LSM7-206ENST00000591515 VTA1Q9NP79 307 aa26.6■■□□□ 1.85
LSM7-206ENST00000591515 MAP3K20Q9NYL2 800 aaKnown RBP26.6■■□□□ 1.85
LSM7-206ENST00000591515 CYP39A1Q9NYL5 469 aa26.6■■□□□ 1.85
LSM7-206ENST00000591515 CNTNAP5Q8WYK1 1306 aa26.6■■□□□ 1.85
LSM7-206ENST00000591515 PTPDC1A2A3K4 754 aa26.59■■□□□ 1.85
LSM7-206ENST00000591515 LPXNO60711 386 aa26.59■■□□□ 1.85
LSM7-206ENST00000591515 SLC35G1Q2M3R5 365 aa26.59■■□□□ 1.85
LSM7-206ENST00000591515 MUM1L1Q5H9M0 696 aa26.59■■□□□ 1.85
LSM7-206ENST00000591515 HERC6Q8IVU3 1022 aa26.59■■□□□ 1.85
LSM7-206ENST00000591515 PHOSPHO2Q8TCD6 241 aa26.59■■□□□ 1.85
LSM7-206ENST00000591515 PURBQ96QR8 312 aaKnown RBP26.59■■□□□ 1.85
LSM7-206ENST00000591515 KIF2CQ99661 725 aa26.59■■□□□ 1.85
LSM7-206ENST00000591515 CD320Q9NPF0 282 aa26.59■■□□□ 1.85
LSM7-206ENST00000591515 FAM217BQ9NTX9 383 aaPredicted RBP26.59■■□□□ 1.85
LSM7-206ENST00000591515 ADD3Q9UEY8 706 aaKnown RBP26.59■■□□□ 1.85
LSM7-206ENST00000591515 B4DLN1 442 aa26.58■■□□□ 1.85
LSM7-206ENST00000591515 PFKFB2O60825 505 aa26.58■■□□□ 1.85
LSM7-206ENST00000591515 IFNAR1P17181 557 aa26.58■■□□□ 1.85
LSM7-206ENST00000591515 MRPL12P52815 198 aaKnown RBP26.58■■□□□ 1.85
LSM7-206ENST00000591515 PURAQ00577 322 aaKnown RBP26.58■■□□□ 1.85
LSM7-206ENST00000591515 STK3Q13188 491 aa26.58■■□□□ 1.85
LSM7-206ENST00000591515 DUSP28Q4G0W2 176 aa26.58■■□□□ 1.85
LSM7-206ENST00000591515 MORC4Q8TE76 937 aa26.58■■□□□ 1.85
LSM7-206ENST00000591515 CLEC4DQ8WXI8 215 aa26.58■■□□□ 1.85
LSM7-206ENST00000591515 ZSCAN31Q96LW9 406 aaPredicted RBP26.58■■□□□ 1.85
LSM7-206ENST00000591515 POLR3EQ9NVU0 708 aa26.58■■□□□ 1.85
LSM7-206ENST00000591515 TPCN1Q9ULQ1 816 aa26.58■■□□□ 1.85
LSM7-206ENST00000591515 LIMCH1Q9UPQ0 1083 aa26.58■■□□□ 1.85
LSM7-206ENST00000591515 SIP14410 1827 aa26.58■■□□□ 1.84
LSM7-206ENST00000591515 NFIBO00712 420 aa26.57■■□□□ 1.84
LSM7-206ENST00000591515 RFC2P35250 354 aa26.57■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms