RNA–Protein interactions for RNA: ENST00000591239.1

DNMT1-223, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-223ENST00000591239 PCDHA8Q9Y5H6 950 aa10.55□□□□□ -0.72
DNMT1-223ENST00000591239 GRIN2DO15399 1336 aa10.55□□□□□ -0.72
DNMT1-223ENST00000591239 SPATA31C2B4DYI2 1134 aa10.54□□□□□ -0.72
DNMT1-223ENST00000591239 ICAM3P32942 547 aa10.54□□□□□ -0.72
DNMT1-223ENST00000591239 BMP8BP34820 402 aa10.54□□□□□ -0.72
DNMT1-223ENST00000591239 ADCY7P51828 1080 aa10.54□□□□□ -0.72
DNMT1-223ENST00000591239 PSMC6P62333 389 aa10.54□□□□□ -0.72
DNMT1-223ENST00000591239 MDM2Q00987 491 aaPredicted RBP10.54□□□□□ -0.72
DNMT1-223ENST00000591239 LAMC2Q13753 1193 aa10.54□□□□□ -0.72
DNMT1-223ENST00000591239 CELF3Q5SZQ8 465 aaKnown RBP10.54□□□□□ -0.72
DNMT1-223ENST00000591239 MYSM1Q5VVJ2 828 aa10.54□□□□□ -0.72
DNMT1-223ENST00000591239 DHX37Q8IY37 1157 aaKnown RBP10.54□□□□□ -0.72
DNMT1-223ENST00000591239 PPTC7Q8NI37 304 aa10.54□□□□□ -0.72
DNMT1-223ENST00000591239 MTG1Q9BT17 334 aaPredicted RBP10.54□□□□□ -0.72
DNMT1-223ENST00000591239 SLC26A6Q9BXS9 759 aa10.54□□□□□ -0.72
DNMT1-223ENST00000591239 SEZ6LQ9BYH1 1024 aa10.54□□□□□ -0.72
DNMT1-223ENST00000591239 GLT8D2Q9H1C3 349 aa10.54□□□□□ -0.72
DNMT1-223ENST00000591239 EHMT1Q9H9B1 1298 aa10.54□□□□□ -0.72
DNMT1-223ENST00000591239 TMEM39AQ9NV64 488 aa10.54□□□□□ -0.72
DNMT1-223ENST00000591239 TRIOBPQ9H2D6 2365 aa10.53□□□□□ -0.72
DNMT1-223ENST00000591239 CPLX1O14810 134 aa10.53□□□□□ -0.72
DNMT1-223ENST00000591239 KIAA0355O15063 1070 aa10.53□□□□□ -0.72
DNMT1-223ENST00000591239 TLR3O15455 904 aaKnown RBP10.53□□□□□ -0.72
DNMT1-223ENST00000591239 FIBPO43427 364 aa10.53□□□□□ -0.72
DNMT1-223ENST00000591239 GGPS1O95749 300 aa10.53□□□□□ -0.72
DNMT1-223ENST00000591239 FOSP01100 380 aaPredicted RBP10.53□□□□□ -0.72
DNMT1-223ENST00000591239 CD4P01730 458 aa10.53□□□□□ -0.72
DNMT1-223ENST00000591239 MMP3P08254 477 aa10.53□□□□□ -0.72
DNMT1-223ENST00000591239 UBA1P22314 1058 aaKnown RBP10.53□□□□□ -0.72
DNMT1-223ENST00000591239 ITGB8P26012 769 aa10.53□□□□□ -0.72
DNMT1-223ENST00000591239 CLK2P49760 499 aaKnown RBP10.53□□□□□ -0.72
DNMT1-223ENST00000591239 NEK4P51957 841 aa10.53□□□□□ -0.72
DNMT1-223ENST00000591239 AK2P54819 239 aa10.53□□□□□ -0.72
DNMT1-223ENST00000591239 SSRP1Q08945 709 aaKnown RBP10.53□□□□□ -0.72
DNMT1-223ENST00000591239 SEMA3FQ13275 785 aa10.53□□□□□ -0.72
DNMT1-223ENST00000591239 ANKRD1Q15327 319 aa10.53□□□□□ -0.72
DNMT1-223ENST00000591239 DGKDQ16760 1214 aa10.53□□□□□ -0.72
DNMT1-223ENST00000591239 CPLX2Q6PUV4 134 aaKnown RBP10.53□□□□□ -0.72
DNMT1-223ENST00000591239 FAM126BQ8IXS8 530 aa10.53□□□□□ -0.72
DNMT1-223ENST00000591239 TRIM22Q8IYM9 498 aa10.53□□□□□ -0.72
DNMT1-223ENST00000591239 CCDC12Q8WUD4 166 aaPredicted RBP10.53□□□□□ -0.72
DNMT1-223ENST00000591239 SPATA33Q96N06 139 aa10.53□□□□□ -0.72
DNMT1-223ENST00000591239 ZMYND12Q9H0C1 365 aa10.53□□□□□ -0.72
DNMT1-223ENST00000591239 SLKQ9H2G2 1235 aaPredicted RBP10.53□□□□□ -0.72
DNMT1-223ENST00000591239 TPCN1Q9ULQ1 816 aa10.53□□□□□ -0.72
DNMT1-223ENST00000591239 A0A1W2PPC1 479 aa10.52□□□□□ -0.73
DNMT1-223ENST00000591239 ESYT2A0FGR8 921 aa10.52□□□□□ -0.73
DNMT1-223ENST00000591239 SORBS3O60504 671 aa10.52□□□□□ -0.73
DNMT1-223ENST00000591239 RAG1P15918 1043 aa10.52□□□□□ -0.73
DNMT1-223ENST00000591239 ITGB5P18084 799 aa10.52□□□□□ -0.73
DNMT1-223ENST00000591239 SCRN1Q12765 414 aa10.52□□□□□ -0.73
DNMT1-223ENST00000591239 AP3B2Q13367 1082 aa10.52□□□□□ -0.73
DNMT1-223ENST00000591239 NEDD9Q14511 834 aa10.52□□□□□ -0.73
DNMT1-223ENST00000591239 NBPF20Q3BBV1 942 aa10.52□□□□□ -0.73
DNMT1-223ENST00000591239 HSDL1Q3SXM5 330 aa10.52□□□□□ -0.73
DNMT1-223ENST00000591239 CYFIP1Q7L576 1253 aa10.52□□□□□ -0.73
DNMT1-223ENST00000591239 NLRX1Q86UT6 975 aa10.52□□□□□ -0.73
DNMT1-223ENST00000591239 BADQ92934 168 aa10.52□□□□□ -0.73
DNMT1-223ENST00000591239 PGBD1Q96JS3 809 aa10.52□□□□□ -0.73
DNMT1-223ENST00000591239 SENP7Q9BQF6 1050 aa10.52□□□□□ -0.73
DNMT1-223ENST00000591239 UBE2OQ9C0C9 1292 aaKnown RBP10.52□□□□□ -0.73
DNMT1-223ENST00000591239 TRPV6Q9H1D0 765 aa10.52□□□□□ -0.73
DNMT1-223ENST00000591239 BCAS3Q9H6U6 928 aa10.52□□□□□ -0.73
DNMT1-223ENST00000591239 MLXIPQ9HAP2 919 aa10.52□□□□□ -0.73
DNMT1-223ENST00000591239 C6orf50Q9HD87 102 aa10.52□□□□□ -0.73
DNMT1-223ENST00000591239 TMEM260Q9NX78 707 aa10.52□□□□□ -0.73
DNMT1-223ENST00000591239 TBX21Q9UL17 535 aa10.52□□□□□ -0.73
DNMT1-223ENST00000591239 MYH7BA7E2Y1 1941 aa10.52□□□□□ -0.73
DNMT1-223ENST00000591239 ADAMTS3O15072 1205 aa10.51□□□□□ -0.73
DNMT1-223ENST00000591239 B4GALT4O60513 344 aa10.51□□□□□ -0.73
DNMT1-223ENST00000591239 PFKFB2O60825 505 aa10.51□□□□□ -0.73
DNMT1-223ENST00000591239 PPFIA4O75335 1185 aa10.51□□□□□ -0.73
DNMT1-223ENST00000591239 TIMP1P01033 207 aa10.51□□□□□ -0.73
DNMT1-223ENST00000591239 HOXD8P13378 290 aaPredicted RBP10.51□□□□□ -0.73
DNMT1-223ENST00000591239 GNA11P29992 359 aa10.51□□□□□ -0.73
DNMT1-223ENST00000591239 SREBF1P36956 1147 aa10.51□□□□□ -0.73
DNMT1-223ENST00000591239 CHMP4BP1P59074 171 aa10.51□□□□□ -0.73
DNMT1-223ENST00000591239 FAM47CQ5HY64 1035 aa10.51□□□□□ -0.73
DNMT1-223ENST00000591239 JAKMIP3Q5VZ66 844 aa10.51□□□□□ -0.73
DNMT1-223ENST00000591239 MCTP2Q6DN12 878 aa10.51□□□□□ -0.73
DNMT1-223ENST00000591239 NFRKBQ6P4R8 1299 aa10.51□□□□□ -0.73
DNMT1-223ENST00000591239 REXO1Q8N1G1 1221 aaKnown RBP10.51□□□□□ -0.73
DNMT1-223ENST00000591239 CCDC148Q8NFR7 591 aa10.51□□□□□ -0.73
DNMT1-223ENST00000591239 BICD2Q8TD16 824 aa10.51□□□□□ -0.73
DNMT1-223ENST00000591239 PPP1R13LQ8WUF5 828 aa10.51□□□□□ -0.73
DNMT1-223ENST00000591239 KAT2BQ92831 832 aa10.51□□□□□ -0.73
DNMT1-223ENST00000591239 GPRASP2Q96D09 838 aa10.51□□□□□ -0.73
DNMT1-223ENST00000591239 CDHR1Q96JP9 859 aa10.51□□□□□ -0.73
DNMT1-223ENST00000591239 ANO3Q9BYT9 981 aa10.51□□□□□ -0.73
DNMT1-223ENST00000591239 SH3GLB2Q9NR46 395 aa10.51□□□□□ -0.73
DNMT1-223ENST00000591239 VPS54Q9P1Q0 977 aa10.51□□□□□ -0.73
DNMT1-223ENST00000591239 UBIAD1Q9Y5Z9 338 aa10.51□□□□□ -0.73
DNMT1-223ENST00000591239 SCN10AQ9Y5Y9 1956 aa10.51□□□□□ -0.73
DNMT1-223ENST00000591239 LTBP2Q14767 1821 aa10.5□□□□□ -0.73
DNMT1-223ENST00000591239 NOP56O00567 594 aaKnown RBP10.5□□□□□ -0.73
DNMT1-223ENST00000591239 MAFGO15525 162 aa10.5□□□□□ -0.73
DNMT1-223ENST00000591239 ATP9AO75110 1047 aa10.5□□□□□ -0.73
DNMT1-223ENST00000591239 CDKL5O76039 1030 aa10.5□□□□□ -0.73
DNMT1-223ENST00000591239 DEXIO95424 95 aa10.5□□□□□ -0.73
DNMT1-223ENST00000591239 SUPT20HL2P0C7V6 817 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms