RNA–Protein interactions for RNA: ENST00000590959.5

SPHK1-207, Transcript of sphingosine kinase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPHK1, Length 1,851 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1-207ENST00000590959 RRAGBQ5VZM2 374 aa21.83■■□□□ 1.09
SPHK1-207ENST00000590959 PDXDC2PQ6P474 469 aa21.83■■□□□ 1.09
SPHK1-207ENST00000590959 POTEEQ6S8J3 1075 aa21.83■■□□□ 1.09
SPHK1-207ENST00000590959 FASTKD5Q7L8L6 764 aaKnown RBP21.83■■□□□ 1.09
SPHK1-207ENST00000590959 SAMD3Q8N6K7 520 aa21.83■■□□□ 1.09
SPHK1-207ENST00000590959 KCNMB3Q9NPA1 279 aa21.83■■□□□ 1.09
SPHK1-207ENST00000590959 MAP3K20Q9NYL2 800 aaKnown RBP21.83■■□□□ 1.09
SPHK1-207ENST00000590959 PCDHA12Q9UN75 941 aa21.83■■□□□ 1.09
SPHK1-207ENST00000590959 BECN2A8MW95 431 aa21.83■■□□□ 1.08
SPHK1-207ENST00000590959 NFIBO00712 420 aa21.83■■□□□ 1.08
SPHK1-207ENST00000590959 TBX3O15119 743 aa21.83■■□□□ 1.08
SPHK1-207ENST00000590959 AOC2O75106 756 aa21.83■■□□□ 1.08
SPHK1-207ENST00000590959 SMC2O95347 1197 aa21.83■■□□□ 1.08
SPHK1-207ENST00000590959 PRR29P0C7W0 189 aa21.83■■□□□ 1.08
SPHK1-207ENST00000590959 AFMP43652 599 aa21.83■■□□□ 1.08
SPHK1-207ENST00000590959 DPCR1Q3MIW9 517 aa21.83■■□□□ 1.08
SPHK1-207ENST00000590959 PRR16Q569H4 304 aa21.83■■□□□ 1.08
SPHK1-207ENST00000590959 SLFN12Q8IYM2 578 aa21.83■■□□□ 1.08
SPHK1-207ENST00000590959 ZNF76P36508 570 aa21.82■■□□□ 1.08
SPHK1-207ENST00000590959 SARSP49591 514 aaKnown RBP21.82■■□□□ 1.08
SPHK1-207ENST00000590959 CAPNS2Q96L46 248 aa21.82■■□□□ 1.08
SPHK1-207ENST00000590959 HOMER2Q9NSB8 354 aa21.82■■□□□ 1.08
SPHK1-207ENST00000590959 FAM86B1E9PN63 330 aa21.81■■□□□ 1.08
SPHK1-207ENST00000590959 PEX10O60683 326 aa21.81■■□□□ 1.08
SPHK1-207ENST00000590959 FAM86B2P0C5J1 330 aa21.81■■□□□ 1.08
SPHK1-207ENST00000590959 TNNT1P13805 278 aa21.81■■□□□ 1.08
SPHK1-207ENST00000590959 HOXA7P31268 230 aaPredicted RBP21.81■■□□□ 1.08
SPHK1-207ENST00000590959 REPS2Q8NFH8 660 aa21.81■■□□□ 1.08
SPHK1-207ENST00000590959 SPATA20Q8TB22 786 aa21.81■■□□□ 1.08
SPHK1-207ENST00000590959 CALML4Q96GE6 196 aa21.81■■□□□ 1.08
SPHK1-207ENST00000590959 TRERF1Q96PN7 1200 aa21.81■■□□□ 1.08
SPHK1-207ENST00000590959 BPIFA3Q9BQP9 254 aa21.81■■□□□ 1.08
SPHK1-207ENST00000590959 CUEDC2Q9H467 287 aa21.81■■□□□ 1.08
SPHK1-207ENST00000590959 IMPACTQ9P2X3 320 aa21.81■■□□□ 1.08
SPHK1-207ENST00000590959 RABGAP1Q9Y3P9 1069 aa21.81■■□□□ 1.08
SPHK1-207ENST00000590959 TESPA1A2RU30 521 aaPredicted RBP21.81■■□□□ 1.08
SPHK1-207ENST00000590959 IGF2BP3O00425 579 aaKnown RBP eCLIP21.81■■□□□ 1.083e-6■□□□□ 11.2
SPHK1-207ENST00000590959 TUBB4AP04350 444 aa21.81■■□□□ 1.08
SPHK1-207ENST00000590959 C1QTNF8P60827 252 aa21.81■■□□□ 1.08
SPHK1-207ENST00000590959 LRRC8AQ8IWT6 810 aa21.81■■□□□ 1.08
SPHK1-207ENST00000590959 TRIML1Q8N9V2 468 aa21.81■■□□□ 1.08
SPHK1-207ENST00000590959 ASCC2Q9H1I8 757 aaPredicted RBP21.81■■□□□ 1.08
SPHK1-207ENST00000590959 POTEMA6NI47 508 aa21.8■■□□□ 1.08
SPHK1-207ENST00000590959 ATP2A1O14983 1001 aa21.8■■□□□ 1.08
SPHK1-207ENST00000590959 NAALADL2Q58DX5 795 aa21.8■■□□□ 1.08
SPHK1-207ENST00000590959 MUM1L1Q5H9M0 696 aa21.8■■□□□ 1.08
SPHK1-207ENST00000590959 KRT79Q5XKE5 535 aa21.8■■□□□ 1.08
SPHK1-207ENST00000590959 ISM2Q6H9L7 571 aa21.8■■□□□ 1.08
SPHK1-207ENST00000590959 ETNPPLQ8TBG4 499 aa21.8■■□□□ 1.08
SPHK1-207ENST00000590959 LENG9Q96B70 501 aa21.8■■□□□ 1.08
SPHK1-207ENST00000590959 FAM20AQ96MK3 541 aa21.8■■□□□ 1.08
SPHK1-207ENST00000590959 MMTAG2Q9BU76 263 aaKnown RBP21.8■■□□□ 1.08
SPHK1-207ENST00000590959 GTPBP4Q9BZE4 634 aaKnown RBP21.8■■□□□ 1.08
SPHK1-207ENST00000590959 SPDYE16A6NNV3 312 aaPredicted RBP21.79■■□□□ 1.08
SPHK1-207ENST00000590959 PDHXO00330 501 aa21.79■■□□□ 1.08
SPHK1-207ENST00000590959 CYP2C8P10632 490 aa21.79■■□□□ 1.08
SPHK1-207ENST00000590959 SNRNP48Q6IEG0 339 aaKnown RBP21.79■■□□□ 1.08
SPHK1-207ENST00000590959 CCDC112Q8NEF3 446 aa21.79■■□□□ 1.08
SPHK1-207ENST00000590959 MAGEF1Q9HAY2 307 aa21.79■■□□□ 1.08
SPHK1-207ENST00000590959 CGNQ9P2M7 1197 aaKnown RBP21.79■■□□□ 1.08
SPHK1-207ENST00000590959 MAN1B1Q9UKM7 699 aa21.79■■□□□ 1.08
SPHK1-207ENST00000590959 ZNF214Q9UL59 606 aaPredicted RBP21.79■■□□□ 1.08
SPHK1-207ENST00000590959 MANSC4A6NHS7 340 aaPredicted RBP21.79■■□□□ 1.08
SPHK1-207ENST00000590959 PLCG1P19174 1290 aa21.79■■□□□ 1.08
SPHK1-207ENST00000590959 TPM4P67936 248 aa21.79■■□□□ 1.08
SPHK1-207ENST00000590959 DPYDQ12882 1025 aa21.79■■□□□ 1.08
SPHK1-207ENST00000590959 TPD52L1Q16890 204 aaPredicted RBP21.79■■□□□ 1.08
SPHK1-207ENST00000590959 GSDMAQ96QA5 445 aa21.79■■□□□ 1.08
SPHK1-207ENST00000590959 PLIN2Q99541 437 aa21.79■■□□□ 1.08
SPHK1-207ENST00000590959 RNF146Q9NTX7 359 aa21.79■■□□□ 1.08
SPHK1-207ENST00000590959 GTPBP6O43824 516 aaPredicted RBP21.78■■□□□ 1.08
SPHK1-207ENST00000590959 VEGFBP49765 207 aa21.78■■□□□ 1.08
SPHK1-207ENST00000590959 TMEM132BQ14DG7 1078 aa21.78■■□□□ 1.08
SPHK1-207ENST00000590959 SNX29Q8TEQ0 813 aa21.78■■□□□ 1.08
SPHK1-207ENST00000590959 CACTINQ8WUQ7 758 aaKnown RBP21.78■■□□□ 1.08
SPHK1-207ENST00000590959 GJA10Q969M2 543 aa21.78■■□□□ 1.08
SPHK1-207ENST00000590959 CDK5RAP3Q96JB5 506 aa21.78■■□□□ 1.08
SPHK1-207ENST00000590959 MTRQ99707 1265 aa21.78■■□□□ 1.08
SPHK1-207ENST00000590959 TEX13BQ9BXU2 312 aa21.78■■□□□ 1.08
SPHK1-207ENST00000590959 RIPK3Q9Y572 518 aa21.78■■□□□ 1.08
SPHK1-207ENST00000590959 COL11A1P12107 1806 aaPredicted RBP21.78■■□□□ 1.08
SPHK1-207ENST00000590959 IGLV3-22A0A075B6J6 115 aa21.77■■□□□ 1.08
SPHK1-207ENST00000590959 MYL1P05976 194 aa21.77■■□□□ 1.08
SPHK1-207ENST00000590959 MORC3Q14149 939 aa21.77■■□□□ 1.08
SPHK1-207ENST00000590959 ANKRD23Q86SG2 305 aa21.77■■□□□ 1.08
SPHK1-207ENST00000590959 SYTL5Q8TDW5 730 aaPredicted RBP21.77■■□□□ 1.08
SPHK1-207ENST00000590959 STAMQ92783 540 aa21.77■■□□□ 1.08
SPHK1-207ENST00000590959 COL20A1Q9P218 1284 aa21.77■■□□□ 1.08
SPHK1-207ENST00000590959 RPTORQ8N122 1335 aa21.77■■□□□ 1.08
SPHK1-207ENST00000590959 NRDCO43847 1150 aa21.77■■□□□ 1.08
SPHK1-207ENST00000590959 KCNJ6P48051 423 aa21.77■■□□□ 1.08
SPHK1-207ENST00000590959 RPS6P62753 249 aaKnown RBP21.77■■□□□ 1.08
SPHK1-207ENST00000590959 UBXN2AP68543 259 aa21.77■■□□□ 1.08
SPHK1-207ENST00000590959 IRX3P78415 501 aaPredicted RBP21.77■■□□□ 1.08
SPHK1-207ENST00000590959 TKFCQ3LXA3 575 aa21.77■■□□□ 1.08
SPHK1-207ENST00000590959 CEP55Q53EZ4 464 aa21.77■■□□□ 1.08
SPHK1-207ENST00000590959 RNF207Q6ZRF8 634 aa21.77■■□□□ 1.08
SPHK1-207ENST00000590959 IFNL1Q8IU54 200 aa21.77■■□□□ 1.08
SPHK1-207ENST00000590959 DHX40Q8IX18 779 aaKnown RBP21.77■■□□□ 1.08
SPHK1-207ENST00000590959 CYP2W1Q8TAV3 490 aa21.77■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms