RNA–Protein interactions for RNA: ENST00000590830.5

MBD3-208, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 1 (best)

Gene MBD3, Length 1,035 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-208ENST00000590830 NBPF20Q3BBV1 942 aa25.66■■□□□ 1.7
MBD3-208ENST00000590830 XRRA1Q6P2D8 792 aa25.66■■□□□ 1.7
MBD3-208ENST00000590830 KAT2BQ92831 832 aa25.66■■□□□ 1.7
MBD3-208ENST00000590830 hCG_1984214I3L0E3 225 aa25.65■■□□□ 1.7
MBD3-208ENST00000590830 GGPS1O95749 300 aa25.65■■□□□ 1.7
MBD3-208ENST00000590830 ZNF713Q8N859 430 aaPredicted RBP25.65■■□□□ 1.7
MBD3-208ENST00000590830 ALDH8A1Q9H2A2 487 aaPredicted RBP25.65■■□□□ 1.7
MBD3-208ENST00000590830 B4GALT4O60513 344 aa25.64■■□□□ 1.7
MBD3-208ENST00000590830 RAG1P15918 1043 aa25.64■■□□□ 1.7
MBD3-208ENST00000590830 ADCY7P51828 1080 aa25.64■■□□□ 1.7
MBD3-208ENST00000590830 HSDL1Q3SXM5 330 aa25.64■■□□□ 1.7
MBD3-208ENST00000590830 PPTC7Q8NI37 304 aa25.64■■□□□ 1.7
MBD3-208ENST00000590830 PGBD1Q96JS3 809 aa25.64■■□□□ 1.7
MBD3-208ENST00000590830 SEZ6LQ9BYH1 1024 aa25.64■■□□□ 1.7
MBD3-208ENST00000590830 TMEM260Q9NX78 707 aa25.64■■□□□ 1.7
MBD3-208ENST00000590830 LTBP2Q14767 1821 aa25.63■■□□□ 1.69
MBD3-208ENST00000590830 LAMA3Q16787 3333 aa25.63■■□□□ 1.69
MBD3-208ENST00000590830 SPDYE3A6NKU9 549 aa25.63■■□□□ 1.69
MBD3-208ENST00000590830 TIMP1P01033 207 aa25.63■■□□□ 1.69
MBD3-208ENST00000590830 ITGB5P18084 799 aa25.63■■□□□ 1.69
MBD3-208ENST00000590830 CLK2P49760 499 aaKnown RBP25.63■■□□□ 1.69
MBD3-208ENST00000590830 EPHB4P54760 987 aa25.63■■□□□ 1.69
MBD3-208ENST00000590830 STK3Q13188 491 aa25.63■■□□□ 1.69
MBD3-208ENST00000590830 GNPTABQ3T906 1256 aa25.63■■□□□ 1.69
MBD3-208ENST00000590830 C8orf34Q49A92 452 aa25.63■■□□□ 1.69
MBD3-208ENST00000590830 SLC26A6Q9BXS9 759 aa25.63■■□□□ 1.69
MBD3-208ENST00000590830 RNF26Q9BY78 433 aaPredicted RBP25.63■■□□□ 1.69
MBD3-208ENST00000590830 TELO2Q9Y4R8 837 aa25.63■■□□□ 1.69
MBD3-208ENST00000590830 TLR3O15455 904 aaKnown RBP25.62■■□□□ 1.69
MBD3-208ENST00000590830 FIBPO43427 364 aa25.62■■□□□ 1.69
MBD3-208ENST00000590830 HOXD8P13378 290 aaPredicted RBP25.62■■□□□ 1.69
MBD3-208ENST00000590830 DGKDQ16760 1214 aa25.62■■□□□ 1.69
MBD3-208ENST00000590830 TDHQ8IZJ6 230 aa25.62■■□□□ 1.69
MBD3-208ENST00000590830 SPATA33Q96N06 139 aa25.62■■□□□ 1.69
MBD3-208ENST00000590830 TRMT13Q9NUP7 481 aaKnown RBP25.62■■□□□ 1.69
MBD3-208ENST00000590830 TPCN1Q9ULQ1 816 aa25.62■■□□□ 1.69
MBD3-208ENST00000590830 UBIAD1Q9Y5Z9 338 aa25.62■■□□□ 1.69
MBD3-208ENST00000590830 SOX1O00570 391 aaPredicted RBP25.61■■□□□ 1.69
MBD3-208ENST00000590830 TEX2Q8IWB9 1127 aa25.61■■□□□ 1.69
MBD3-208ENST00000590830 ZMYND12Q9H0C1 365 aa25.61■■□□□ 1.69
MBD3-208ENST00000590830 MLXIPQ9HAP2 919 aa25.61■■□□□ 1.69
MBD3-208ENST00000590830 ATP9AO75110 1047 aa25.6■■□□□ 1.69
MBD3-208ENST00000590830 PPFIA4O75335 1185 aa25.6■■□□□ 1.69
MBD3-208ENST00000590830 NFRKBQ6P4R8 1299 aa25.6■■□□□ 1.69
MBD3-208ENST00000590830 CYFIP1Q7L576 1253 aa25.6■■□□□ 1.69
MBD3-208ENST00000590830 SCN10AQ9Y5Y9 1956 aa25.6■■□□□ 1.69
MBD3-208ENST00000590830 ESYT2A0FGR8 921 aa25.59■■□□□ 1.69
MBD3-208ENST00000590830 EIF5BO60841 1220 aaKnown RBP25.59■■□□□ 1.69
MBD3-208ENST00000590830 FOSP01100 380 aaPredicted RBP25.59■■□□□ 1.69
MBD3-208ENST00000590830 ZNF286BP0CG31 522 aa25.59■■□□□ 1.69
MBD3-208ENST00000590830 CYP2C18P33260 490 aa25.59■■□□□ 1.69
MBD3-208ENST00000590830 AK2P54819 239 aa25.59■■□□□ 1.69
MBD3-208ENST00000590830 CHMP4BP1P59074 171 aa25.59■■□□□ 1.69
MBD3-208ENST00000590830 AKAP17AQ02040 695 aaKnown RBP25.59■■□□□ 1.69
MBD3-208ENST00000590830 SHHQ15465 462 aa25.59■■□□□ 1.69
MBD3-208ENST00000590830 FAM47CQ5HY64 1035 aa25.59■■□□□ 1.69
MBD3-208ENST00000590830 C9orf50Q5SZB4 431 aa25.59■■□□□ 1.69
MBD3-208ENST00000590830 JAKMIP3Q5VZ66 844 aa25.59■■□□□ 1.69
MBD3-208ENST00000590830 NLRX1Q86UT6 975 aa25.59■■□□□ 1.69
MBD3-208ENST00000590830 CYP2W1Q8TAV3 490 aa25.59■■□□□ 1.69
MBD3-208ENST00000590830 GPRASP2Q96D09 838 aa25.59■■□□□ 1.69
MBD3-208ENST00000590830 SENP7Q9BQF6 1050 aa25.59■■□□□ 1.69
MBD3-208ENST00000590830 ANO3Q9BYT9 981 aa25.59■■□□□ 1.69
MBD3-208ENST00000590830 PPP1R12CQ9BZL4 782 aa25.59■■□□□ 1.69
MBD3-208ENST00000590830 UMODL1Q5DID0 1318 aa25.59■■□□□ 1.69
MBD3-208ENST00000590830 HAS3O00219 553 aa25.58■■□□□ 1.69
MBD3-208ENST00000590830 SCRN1Q12765 414 aa25.58■■□□□ 1.69
MBD3-208ENST00000590830 NEDD9Q14511 834 aa25.58■■□□□ 1.69
MBD3-208ENST00000590830 MFSD5Q6N075 450 aa25.58■■□□□ 1.69
MBD3-208ENST00000590830 METTL7BQ6UX53 244 aa25.58■■□□□ 1.69
MBD3-208ENST00000590830 NOC4LQ9BVI4 516 aaKnown RBP25.58■■□□□ 1.69
MBD3-208ENST00000590830 GLT8D2Q9H1C3 349 aa25.58■■□□□ 1.69
MBD3-208ENST00000590830 JADE2Q9NQC1 790 aa25.58■■□□□ 1.69
MBD3-208ENST00000590830 VPS54Q9P1Q0 977 aa25.58■■□□□ 1.69
MBD3-208ENST00000590830 SZT2Q5T011 3432 aa25.58■■□□□ 1.69
MBD3-208ENST00000590830 PFKFB2O60825 505 aa25.57■■□□□ 1.68
MBD3-208ENST00000590830 DTNBO60941 627 aa25.57■■□□□ 1.68
MBD3-208ENST00000590830 F2P00734 622 aa25.57■■□□□ 1.68
MBD3-208ENST00000590830 CYP2C9P11712 490 aa25.57■■□□□ 1.68
MBD3-208ENST00000590830 KCNA2P16389 499 aa25.57■■□□□ 1.68
MBD3-208ENST00000590830 PSEN2P49810 448 aa25.57■■□□□ 1.68
MBD3-208ENST00000590830 PTPN11Q06124 597 aaPredicted RBP25.57■■□□□ 1.68
MBD3-208ENST00000590830 SSRP1Q08945 709 aaKnown RBP25.57■■□□□ 1.68
MBD3-208ENST00000590830 CTAGE1Q96RT6 745 aa25.57■■□□□ 1.68
MBD3-208ENST00000590830 C16orf70Q9BSU1 422 aa25.57■■□□□ 1.68
MBD3-208ENST00000590830 SREBF1P36956 1147 aa25.56■■□□□ 1.68
MBD3-208ENST00000590830 FPGSQ05932 587 aa25.56■■□□□ 1.68
MBD3-208ENST00000590830 AP3B2Q13367 1082 aa25.56■■□□□ 1.68
MBD3-208ENST00000590830 LRIT3Q3SXY7 679 aa25.56■■□□□ 1.68
MBD3-208ENST00000590830 C16orf59Q7L2K0 433 aa25.56■■□□□ 1.68
MBD3-208ENST00000590830 LRCH3Q96II8 777 aa25.56■■□□□ 1.68
MBD3-208ENST00000590830 GPR20Q99678 358 aa25.56■■□□□ 1.68
MBD3-208ENST00000590830 MXRA8Q9BRK3 442 aa25.56■■□□□ 1.68
MBD3-208ENST00000590830 HIPK3Q9H422 1215 aa25.56■■□□□ 1.68
MBD3-208ENST00000590830 EHMT1Q9H9B1 1298 aa25.56■■□□□ 1.68
MBD3-208ENST00000590830 C6orf50Q9HD87 102 aa25.56■■□□□ 1.68
MBD3-208ENST00000590830 MYH7BA7E2Y1 1941 aa25.55■■□□□ 1.68
MBD3-208ENST00000590830 CPLX1O14810 134 aa25.55■■□□□ 1.68
MBD3-208ENST00000590830 CSF2RAP15509 400 aa25.55■■□□□ 1.68
MBD3-208ENST00000590830 MFSD10Q14728 455 aa25.55■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms