RNA–Protein interactions for RNA: ENST00000589941.1

SMAD4-209, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-209ENST00000589941 GATA4P43694 442 aa9.83□□□□□ -0.84
SMAD4-209ENST00000589941 CRKP46108 304 aa9.83□□□□□ -0.84
SMAD4-209ENST00000589941 KCNJ4P48050 445 aa9.83□□□□□ -0.84
SMAD4-209ENST00000589941 FKBP1AP62942 108 aaKnown RBP9.83□□□□□ -0.84
SMAD4-209ENST00000589941 NRG1Q02297 640 aaPredicted RBP9.83□□□□□ -0.84
SMAD4-209ENST00000589941 FAAP100Q0VG06 881 aa9.83□□□□□ -0.84
SMAD4-209ENST00000589941 MAP3K21Q5TCX8 1036 aa9.83□□□□□ -0.84
SMAD4-209ENST00000589941 ERICH6BQ5W0A0 696 aa9.83□□□□□ -0.84
SMAD4-209ENST00000589941 AGGF1Q8N302 714 aaeCLIP9.83□□□□□ -0.84
SMAD4-209ENST00000589941 ANKRD13CQ8N6S4 541 aa9.83□□□□□ -0.84
SMAD4-209ENST00000589941 ATXN2LQ8WWM7 1075 aaKnown RBP9.83□□□□□ -0.84
SMAD4-209ENST00000589941 WFDC12Q8WWY7 111 aa9.83□□□□□ -0.84
SMAD4-209ENST00000589941 C1QTNF1Q9BXJ1 281 aa9.83□□□□□ -0.84
SMAD4-209ENST00000589941 MRPL18Q9H0U6 180 aaKnown RBP9.83□□□□□ -0.84
SMAD4-209ENST00000589941 CWC25Q9NXE8 425 aaPredicted RBP9.83□□□□□ -0.84
SMAD4-209ENST00000589941 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.83□□□□□ -0.84
SMAD4-209ENST00000589941 F8W735 103 aaPredicted RBP9.82□□□□□ -0.84
SMAD4-209ENST00000589941 TNNI2P48788 182 aa9.82□□□□□ -0.84
SMAD4-209ENST00000589941 MRE11P49959 708 aa9.82□□□□□ -0.84
SMAD4-209ENST00000589941 MFSD14BQ5SR56 506 aa9.82□□□□□ -0.84
SMAD4-209ENST00000589941 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.82□□□□□ -0.84
SMAD4-209ENST00000589941 CCDC191Q8NCU4 936 aa9.82□□□□□ -0.84
SMAD4-209ENST00000589941 DUSP9Q99956 384 aaKnown RBP9.82□□□□□ -0.84
SMAD4-209ENST00000589941 A0A0G2JMZ2 1700 aa9.82□□□□□ -0.84
SMAD4-209ENST00000589941 A0A0G2JLL6 359 aaPredicted RBP9.81□□□□□ -0.84
SMAD4-209ENST00000589941 PRPF40AO75400 957 aaKnown RBP9.81□□□□□ -0.84
SMAD4-209ENST00000589941 CCND3P30281 292 aaPredicted RBP9.81□□□□□ -0.84
SMAD4-209ENST00000589941 ARL4DP49703 201 aa9.81□□□□□ -0.84
SMAD4-209ENST00000589941 EPHB4P54760 987 aa9.81□□□□□ -0.84
SMAD4-209ENST00000589941 GSTM4Q03013 218 aa9.81□□□□□ -0.84
SMAD4-209ENST00000589941 DTHD1Q6ZMT9 781 aa9.81□□□□□ -0.84
SMAD4-209ENST00000589941 GADL1Q6ZQY3 521 aa9.81□□□□□ -0.84
SMAD4-209ENST00000589941 KIAA1211Q6ZU35 1233 aa9.81□□□□□ -0.84
SMAD4-209ENST00000589941 C15orf52Q6ZUT6 534 aaKnown RBP9.81□□□□□ -0.84
SMAD4-209ENST00000589941 ACAD11Q709F0 780 aa9.81□□□□□ -0.84
SMAD4-209ENST00000589941 PRRT2Q7Z6L0 340 aaPredicted RBP9.81□□□□□ -0.84
SMAD4-209ENST00000589941 TMEM130Q8N3G9 435 aa9.81□□□□□ -0.84
SMAD4-209ENST00000589941 COA7Q96BR5 231 aa9.81□□□□□ -0.84
SMAD4-209ENST00000589941 ZNF341Q9BYN7 854 aa9.81□□□□□ -0.84
SMAD4-209ENST00000589941 ANKRD2Q9GZV1 360 aa9.81□□□□□ -0.84
SMAD4-209ENST00000589941 SOX17Q9H6I2 414 aaPredicted RBP9.81□□□□□ -0.84
SMAD4-209ENST00000589941 DBF4Q9UBU7 674 aaPredicted RBP9.81□□□□□ -0.84
SMAD4-209ENST00000589941 GJD2Q9UKL4 321 aa9.81□□□□□ -0.84
SMAD4-209ENST00000589941 ATRNL1Q5VV63 1379 aa9.8□□□□□ -0.84
SMAD4-209ENST00000589941 PEX10O60683 326 aa9.8□□□□□ -0.84
SMAD4-209ENST00000589941 B3GALT4O96024 378 aa9.8□□□□□ -0.84
SMAD4-209ENST00000589941 IGHA1P01876 353 aa9.8□□□□□ -0.84
SMAD4-209ENST00000589941 IGKV5-2P06315 115 aa9.8□□□□□ -0.84
SMAD4-209ENST00000589941 HSP90B1P14625 803 aaKnown RBP9.8□□□□□ -0.84
SMAD4-209ENST00000589941 IGHMBP2P38935 993 aaKnown RBP9.8□□□□□ -0.84
SMAD4-209ENST00000589941 RTP1P59025 263 aa9.8□□□□□ -0.84
SMAD4-209ENST00000589941 CCDC85BQ15834 202 aaPredicted RBP9.8□□□□□ -0.84
SMAD4-209ENST00000589941 DUOXA2Q1HG44 320 aa9.8□□□□□ -0.84
SMAD4-209ENST00000589941 TREML2Q5T2D2 321 aa9.8□□□□□ -0.84
SMAD4-209ENST00000589941 ZNF804AQ7Z570 1209 aa9.8□□□□□ -0.84
SMAD4-209ENST00000589941 CCDC84Q86UT8 332 aaPredicted RBP9.8□□□□□ -0.84
SMAD4-209ENST00000589941 C3orf58Q8NDZ4 430 aa9.8□□□□□ -0.84
SMAD4-209ENST00000589941 SMCR8Q8TEV9 937 aaPredicted RBP9.8□□□□□ -0.84
SMAD4-209ENST00000589941 BADQ92934 168 aa9.8□□□□□ -0.84
SMAD4-209ENST00000589941 NRSN2Q9GZP1 204 aa9.8□□□□□ -0.84
SMAD4-209ENST00000589941 HYPKQ9NX55 129 aa9.8□□□□□ -0.84
SMAD4-209ENST00000589941 ZNF112Q9UJU3 913 aa9.8□□□□□ -0.84
SMAD4-209ENST00000589941 DAGLAQ9Y4D2 1042 aa9.8□□□□□ -0.84
SMAD4-209ENST00000589941 KCNQ1P51787 676 aa9.79□□□□□ -0.84
SMAD4-209ENST00000589941 MFAP1P55081 439 aaKnown RBP9.79□□□□□ -0.84
SMAD4-209ENST00000589941 MRPS5P82675 430 aaKnown RBP9.79□□□□□ -0.84
SMAD4-209ENST00000589941 TFF2Q03403 129 aa9.79□□□□□ -0.84
SMAD4-209ENST00000589941 NOL9Q5SY16 702 aaKnown RBP9.79□□□□□ -0.84
SMAD4-209ENST00000589941 MEGF10Q96KG7 1140 aa9.79□□□□□ -0.84
SMAD4-209ENST00000589941 C12orf49Q9H741 205 aa9.79□□□□□ -0.84
SMAD4-209ENST00000589941 AKTIPQ9H8T0 292 aa9.79□□□□□ -0.84
SMAD4-209ENST00000589941 PPP4R2Q9NY27 417 aa9.79□□□□□ -0.84
SMAD4-209ENST00000589941 COL4A4P53420 1690 aaPredicted RBP9.79□□□□□ -0.84
SMAD4-209ENST00000589941 MYH2Q9UKX2 1941 aa9.78□□□□□ -0.84
SMAD4-209ENST00000589941 SIPA1L1O43166 1804 aa9.78□□□□□ -0.84
SMAD4-209ENST00000589941 DLGAP3O95886 979 aa9.78□□□□□ -0.84
SMAD4-209ENST00000589941 CYP2B6P20813 491 aa9.78□□□□□ -0.84
SMAD4-209ENST00000589941 GNA15P30679 374 aa9.78□□□□□ -0.84
SMAD4-209ENST00000589941 CACNB2Q08289 660 aaPredicted RBP9.78□□□□□ -0.84
SMAD4-209ENST00000589941 DOC2BQ14184 412 aa9.78□□□□□ -0.84
SMAD4-209ENST00000589941 PDE3AQ14432 1141 aa9.78□□□□□ -0.84
SMAD4-209ENST00000589941 CCL14Q16627 93 aa9.78□□□□□ -0.84
SMAD4-209ENST00000589941 FAM110CQ1W6H9 321 aa9.78□□□□□ -0.84
SMAD4-209ENST00000589941 CWF19L2Q2TBE0 894 aaKnown RBP9.78□□□□□ -0.84
SMAD4-209ENST00000589941 RPS26P11Q5JNZ5 115 aaPredicted RBP9.78□□□□□ -0.84
SMAD4-209ENST00000589941 TMEM31Q5JXX7 168 aa9.78□□□□□ -0.84
SMAD4-209ENST00000589941 DCAF15Q66K64 600 aa9.78□□□□□ -0.84
SMAD4-209ENST00000589941 UBE3BQ7Z3V4 1068 aa9.78□□□□□ -0.84
SMAD4-209ENST00000589941 TRIM56Q9BRZ2 755 aaKnown RBP9.78□□□□□ -0.84
SMAD4-209ENST00000589941 METTL22Q9BUU2 404 aaPredicted RBP9.78□□□□□ -0.84
SMAD4-209ENST00000589941 SENP6Q9GZR1 1112 aaPredicted RBP9.78□□□□□ -0.84
SMAD4-209ENST00000589941 PRDM12Q9H4Q4 367 aa9.78□□□□□ -0.84
SMAD4-209ENST00000589941 PRDM5Q9NQX1 630 aaPredicted RBP9.78□□□□□ -0.84
SMAD4-209ENST00000589941 TPSG1Q9NRR2 321 aa9.78□□□□□ -0.84
SMAD4-209ENST00000589941 BABAM1Q9NWV8 329 aa9.78□□□□□ -0.84
SMAD4-209ENST00000589941 AKAP2Q9Y2D5 859 aa9.78□□□□□ -0.84
SMAD4-209ENST00000589941 ATP11BQ9Y2G3 1177 aa9.78□□□□□ -0.84
SMAD4-209ENST00000589941 MAPK8IP3Q9UPT6 1336 aa9.78□□□□□ -0.84
SMAD4-209ENST00000589941 CHL1O00533 1208 aa9.77□□□□□ -0.85
SMAD4-209ENST00000589941 ECEL1O95672 775 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms