RNA–Protein interactions for RNA: ENST00000589349.5

DNMT1-219, Transcript of DNA methyltransferase 1, humanhuman

TSL 4

Gene DNMT1, Length 603 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-219ENST00000589349 TRIM17Q9Y577 477 aa10□□□□□ -0.81
DNMT1-219ENST00000589349 A0A096LPE4 126 aa9.99□□□□□ -0.81
DNMT1-219ENST00000589349 A0A1W2PPZ6 126 aa9.99□□□□□ -0.81
DNMT1-219ENST00000589349 SOX10P56693 466 aa9.99□□□□□ -0.81
DNMT1-219ENST00000589349 ATP2B2Q01814 1243 aa9.99□□□□□ -0.81
DNMT1-219ENST00000589349 SUZ12Q15022 739 aaKnown RBP9.99□□□□□ -0.81
DNMT1-219ENST00000589349 CLASRPQ8N2M8 674 aaKnown RBP9.99□□□□□ -0.81
DNMT1-219ENST00000589349 FBF1Q8TES7 1133 aa9.99□□□□□ -0.81
DNMT1-219ENST00000589349 SLC7A3Q8WY07 619 aa9.99□□□□□ -0.81
DNMT1-219ENST00000589349 ERO1AQ96HE7 468 aa9.99□□□□□ -0.81
DNMT1-219ENST00000589349 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.99□□□□□ -0.81
DNMT1-219ENST00000589349 AATFQ9NY61 560 aaKnown RBP eCLIP9.99□□□□□ -0.81
DNMT1-219ENST00000589349 MYH13Q9UKX3 1938 aa9.99□□□□□ -0.81
DNMT1-219ENST00000589349 METTL12A8MUP2 240 aa9.98□□□□□ -0.81
DNMT1-219ENST00000589349 ENTPD3O75355 529 aa9.98□□□□□ -0.81
DNMT1-219ENST00000589349 CYP7A1P22680 504 aa9.98□□□□□ -0.81
DNMT1-219ENST00000589349 C19orf57Q0VDD7 668 aa9.98□□□□□ -0.81
DNMT1-219ENST00000589349 KIF22Q14807 665 aa9.98□□□□□ -0.81
DNMT1-219ENST00000589349 ARHGEF6Q15052 776 aa9.98□□□□□ -0.81
DNMT1-219ENST00000589349 PKN2Q16513 984 aaKnown RBP9.98□□□□□ -0.81
DNMT1-219ENST00000589349 SLC4A8Q2Y0W8 1093 aa9.98□□□□□ -0.81
DNMT1-219ENST00000589349 GADL1Q6ZQY3 521 aa9.98□□□□□ -0.81
DNMT1-219ENST00000589349 CRACR2BQ8N4Y2 399 aaPredicted RBP9.98□□□□□ -0.81
DNMT1-219ENST00000589349 CD99L2Q8TCZ2 262 aa9.98□□□□□ -0.81
DNMT1-219ENST00000589349 SH3RF3Q8TEJ3 882 aaPredicted RBP9.98□□□□□ -0.81
DNMT1-219ENST00000589349 BRI3BPQ8WY22 251 aa9.98□□□□□ -0.81
DNMT1-219ENST00000589349 NSUN4Q96CB9 384 aaKnown RBP9.98□□□□□ -0.81
DNMT1-219ENST00000589349 DNAJC2Q99543 621 aaKnown RBP9.98□□□□□ -0.81
DNMT1-219ENST00000589349 GPR108Q9NPR9 543 aa9.98□□□□□ -0.81
DNMT1-219ENST00000589349 PPP4R2Q9NY27 417 aa9.98□□□□□ -0.81
DNMT1-219ENST00000589349 SNCAIPQ9Y6H5 919 aa9.98□□□□□ -0.81
DNMT1-219ENST00000589349 ECM29Q5VYK3 1845 aa9.98□□□□□ -0.81
DNMT1-219ENST00000589349 GPR75-ASB3A0A0A6YYF3 556 aa9.97□□□□□ -0.81
DNMT1-219ENST00000589349 DDTLA6NHG4 134 aaPredicted RBP9.97□□□□□ -0.81
DNMT1-219ENST00000589349 GRIA4P48058 902 aa9.97□□□□□ -0.81
DNMT1-219ENST00000589349 SP3Q02447 781 aa9.97□□□□□ -0.81
DNMT1-219ENST00000589349 PPATQ06203 517 aa9.97□□□□□ -0.81
DNMT1-219ENST00000589349 PPIL2Q13356 520 aa9.97□□□□□ -0.81
DNMT1-219ENST00000589349 FOXD4L6Q3SYB3 417 aaPredicted RBP9.97□□□□□ -0.81
DNMT1-219ENST00000589349 ALG1LQ6GMV1 187 aa9.97□□□□□ -0.81
DNMT1-219ENST00000589349 FOXD4L3Q6VB84 417 aaPredicted RBP9.97□□□□□ -0.81
DNMT1-219ENST00000589349 MAPKAPK5Q8IW41 473 aa9.97□□□□□ -0.81
DNMT1-219ENST00000589349 RPAP2Q8IXW5 612 aaPredicted RBP9.97□□□□□ -0.81
DNMT1-219ENST00000589349 FAM43AQ8N2R8 423 aa9.97□□□□□ -0.81
DNMT1-219ENST00000589349 TMEM130Q8N3G9 435 aa9.97□□□□□ -0.81
DNMT1-219ENST00000589349 EPS8L3Q8TE67 593 aaKnown RBP9.97□□□□□ -0.81
DNMT1-219ENST00000589349 TGFBRAP1Q8WUH2 860 aa9.97□□□□□ -0.81
DNMT1-219ENST00000589349 EAF2Q96CJ1 260 aaPredicted RBP9.97□□□□□ -0.81
DNMT1-219ENST00000589349 PTPN18Q99952 460 aa9.97□□□□□ -0.81
DNMT1-219ENST00000589349 GZF1Q9H116 711 aaPredicted RBP9.97□□□□□ -0.81
DNMT1-219ENST00000589349 CLEC4MQ9H2X3 399 aaPredicted RBP9.97□□□□□ -0.81
DNMT1-219ENST00000589349 SOX17Q9H6I2 414 aaPredicted RBP9.97□□□□□ -0.81
DNMT1-219ENST00000589349 DDX4Q9NQI0 724 aaKnown RBP9.97□□□□□ -0.81
DNMT1-219ENST00000589349 SAP30BPQ9UHR5 308 aaKnown RBP9.97□□□□□ -0.81
DNMT1-219ENST00000589349 DBNLQ9UJU6 430 aaKnown RBP9.97□□□□□ -0.81
DNMT1-219ENST00000589349 NOP58Q9Y2X3 529 aaKnown RBP9.97□□□□□ -0.81
DNMT1-219ENST00000589349 ZHX2Q9Y6X8 837 aa9.97□□□□□ -0.81
DNMT1-219ENST00000589349 GAKO14976 1311 aa9.97□□□□□ -0.81
DNMT1-219ENST00000589349 PDS5AQ29RF7 1337 aaKnown RBP9.97□□□□□ -0.81
DNMT1-219ENST00000589349 ARAP2Q8WZ64 1704 aa9.96□□□□□ -0.81
DNMT1-219ENST00000589349 TRIM75PA6NK02 468 aa9.96□□□□□ -0.82
DNMT1-219ENST00000589349 MAP3K12Q12852 859 aa9.96□□□□□ -0.82
DNMT1-219ENST00000589349 C20orf194Q5TEA3 1177 aa9.96□□□□□ -0.82
DNMT1-219ENST00000589349 MAGEB6Q8N7X4 407 aa9.96□□□□□ -0.82
DNMT1-219ENST00000589349 MIGA1Q8NAN2 632 aa9.96□□□□□ -0.82
DNMT1-219ENST00000589349 WFDC12Q8WWY7 111 aa9.96□□□□□ -0.82
DNMT1-219ENST00000589349 KIF1BPQ96EK5 621 aa9.96□□□□□ -0.82
DNMT1-219ENST00000589349 KLHDC7BQ96G42 594 aa9.96□□□□□ -0.82
DNMT1-219ENST00000589349 IDI2Q9BXS1 227 aa9.96□□□□□ -0.82
DNMT1-219ENST00000589349 AKTIPQ9H8T0 292 aa9.96□□□□□ -0.82
DNMT1-219ENST00000589349 PIH1D3Q9NQM4 214 aaKnown RBP9.96□□□□□ -0.82
DNMT1-219ENST00000589349 BTBD19C9JJ37 291 aa9.95□□□□□ -0.82
DNMT1-219ENST00000589349 PDHXO00330 501 aa9.95□□□□□ -0.82
DNMT1-219ENST00000589349 TM4SF5O14894 197 aa9.95□□□□□ -0.82
DNMT1-219ENST00000589349 ESRRAP11474 423 aaPredicted RBP9.95□□□□□ -0.82
DNMT1-219ENST00000589349 ITPKAP23677 461 aa9.95□□□□□ -0.82
DNMT1-219ENST00000589349 DYNLL1P63167 89 aaKnown RBP9.95□□□□□ -0.82
DNMT1-219ENST00000589349 PCDH1Q08174 1060 aa9.95□□□□□ -0.82
DNMT1-219ENST00000589349 GRM2Q14416 872 aa9.95□□□□□ -0.82
DNMT1-219ENST00000589349 COL19A1Q14993 1142 aa9.95□□□□□ -0.82
DNMT1-219ENST00000589349 SPRED3Q2MJR0 410 aa9.95□□□□□ -0.82
DNMT1-219ENST00000589349 FBXO46Q6PJ61 603 aaPredicted RBP9.95□□□□□ -0.82
DNMT1-219ENST00000589349 SCYL3Q8IZE3 742 aa9.95□□□□□ -0.82
DNMT1-219ENST00000589349 CPA4Q9UI42 421 aa9.95□□□□□ -0.82
DNMT1-219ENST00000589349 MYH2Q9UKX2 1941 aa9.94□□□□□ -0.82
DNMT1-219ENST00000589349 RPAP1Q9BWH6 1393 aaPredicted RBP9.94□□□□□ -0.82
DNMT1-219ENST00000589349 F8W735 103 aaPredicted RBP9.94□□□□□ -0.82
DNMT1-219ENST00000589349 GOLIM4O00461 696 aa9.94□□□□□ -0.82
DNMT1-219ENST00000589349 SOX1O00570 391 aaPredicted RBP9.94□□□□□ -0.82
DNMT1-219ENST00000589349 CTNND1O60716 968 aaKnown RBP9.94□□□□□ -0.82
DNMT1-219ENST00000589349 RAB11FIP3O75154 756 aa9.94□□□□□ -0.82
DNMT1-219ENST00000589349 HLA-DOAP06340 250 aa9.94□□□□□ -0.82
DNMT1-219ENST00000589349 RHBDL3P58872 404 aa9.94□□□□□ -0.82
DNMT1-219ENST00000589349 FGD1P98174 961 aa9.94□□□□□ -0.82
DNMT1-219ENST00000589349 TTF1Q15361 905 aaPredicted RBP9.94□□□□□ -0.82
DNMT1-219ENST00000589349 DUOXA2Q1HG44 320 aa9.94□□□□□ -0.82
DNMT1-219ENST00000589349 ACAD11Q709F0 780 aa9.94□□□□□ -0.82
DNMT1-219ENST00000589349 OTOP1Q7RTM1 612 aa9.94□□□□□ -0.82
DNMT1-219ENST00000589349 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.94□□□□□ -0.82
DNMT1-219ENST00000589349 CCDC84Q86UT8 332 aaPredicted RBP9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms