RNA–Protein interactions for RNA: ENST00000589116.1

CCBE1-203, Transcript of collagen and calcium binding EGF domains 1, humanhuman

TSL 1 (best)

Gene CCBE1, Length 1,691 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-203ENST00000589116 SYTL5Q8TDW5 730 aaPredicted RBP13.56□□□□□ -0.24
CCBE1-203ENST00000589116 SNX29Q8TEQ0 813 aa13.56□□□□□ -0.24
CCBE1-203ENST00000589116 NT5C3AQ9H0P0 336 aa13.56□□□□□ -0.24
CCBE1-203ENST00000589116 HOMER2Q9NSB8 354 aa13.56□□□□□ -0.24
CCBE1-203ENST00000589116 RMND1Q9NWS8 449 aa13.56□□□□□ -0.24
CCBE1-203ENST00000589116 AGTPBP1Q9UPW5 1226 aa13.56□□□□□ -0.24
CCBE1-203ENST00000589116 A0A087WWV3 80 aa13.55□□□□□ -0.24
CCBE1-203ENST00000589116 SMTNL1A8MU46 457 aa13.55□□□□□ -0.24
CCBE1-203ENST00000589116 TRAF5O00463 557 aa13.55□□□□□ -0.24
CCBE1-203ENST00000589116 IKBKBO14920 756 aa13.55□□□□□ -0.24
CCBE1-203ENST00000589116 MSH4O15457 936 aa13.55□□□□□ -0.24
CCBE1-203ENST00000589116 BCRP11274 1271 aa13.55□□□□□ -0.24
CCBE1-203ENST00000589116 RPS6P62753 249 aaKnown RBP13.55□□□□□ -0.24
CCBE1-203ENST00000589116 AMPD3Q01432 767 aa13.55□□□□□ -0.24
CCBE1-203ENST00000589116 PABPC4Q13310 644 aaKnown RBP eCLIP13.55□□□□□ -0.24
CCBE1-203ENST00000589116 GRB10Q13322 594 aa13.55□□□□□ -0.24
CCBE1-203ENST00000589116 TMEM119Q4V9L6 283 aa13.55□□□□□ -0.24
CCBE1-203ENST00000589116 PCNX4Q63HM2 1172 aa13.55□□□□□ -0.24
CCBE1-203ENST00000589116 PLA2G4DQ86XP0 818 aa13.55□□□□□ -0.24
CCBE1-203ENST00000589116 DHX40Q8IX18 779 aaKnown RBP13.55□□□□□ -0.24
CCBE1-203ENST00000589116 ERMNQ8TAM6 284 aa13.55□□□□□ -0.24
CCBE1-203ENST00000589116 OPTNQ96CV9 577 aa13.55□□□□□ -0.24
CCBE1-203ENST00000589116 MTRQ99707 1265 aa13.55□□□□□ -0.24
CCBE1-203ENST00000589116 ACAD9Q9H845 621 aa13.55□□□□□ -0.24
CCBE1-203ENST00000589116 COL20A1Q9P218 1284 aa13.55□□□□□ -0.24
CCBE1-203ENST00000589116 MEIS1O00470 390 aa13.54□□□□□ -0.24
CCBE1-203ENST00000589116 STAT3P40763 770 aa13.54□□□□□ -0.24
CCBE1-203ENST00000589116 IRX3P78415 501 aaPredicted RBP13.54□□□□□ -0.24
CCBE1-203ENST00000589116 SPIRE1Q08AE8 756 aa13.54□□□□□ -0.24
CCBE1-203ENST00000589116 XRRA1Q6P2D8 792 aa13.54□□□□□ -0.24
CCBE1-203ENST00000589116 AOPEPQ8N6M6 819 aa13.54□□□□□ -0.24
CCBE1-203ENST00000589116 CHST13Q8NET6 341 aa13.54□□□□□ -0.24
CCBE1-203ENST00000589116 LRRC27Q9C0I9 530 aa13.54□□□□□ -0.24
CCBE1-203ENST00000589116 TRPM7Q96QT4 1865 aa13.54□□□□□ -0.24
CCBE1-203ENST00000589116 BMP6P22004 513 aa13.53□□□□□ -0.24
CCBE1-203ENST00000589116 TPM4P67936 248 aa13.53□□□□□ -0.24
CCBE1-203ENST00000589116 CUL4BQ13620 913 aa13.53□□□□□ -0.24
CCBE1-203ENST00000589116 KCNB1Q14721 858 aa13.53□□□□□ -0.24
CCBE1-203ENST00000589116 NSMFQ6X4W1 530 aa13.53□□□□□ -0.24
CCBE1-203ENST00000589116 SLC30A10Q6XR72 485 aa13.53□□□□□ -0.24
CCBE1-203ENST00000589116 KCTD17Q8N5Z5 321 aa13.53□□□□□ -0.24
CCBE1-203ENST00000589116 LARP4BQ92615 738 aaKnown RBP13.53□□□□□ -0.24
CCBE1-203ENST00000589116 SLC5A5Q92911 643 aa13.53□□□□□ -0.24
CCBE1-203ENST00000589116 PNMA5Q96PV4 448 aa13.53□□□□□ -0.24
CCBE1-203ENST00000589116 MXRA8Q9BRK3 442 aa13.53□□□□□ -0.24
CCBE1-203ENST00000589116 GTPBP4Q9BZE4 634 aaKnown RBP13.53□□□□□ -0.24
CCBE1-203ENST00000589116 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.53□□□□□ -0.24
CCBE1-203ENST00000589116 FBXO40Q9UH90 709 aa13.53□□□□□ -0.24
CCBE1-203ENST00000589116 RIPK3Q9Y572 518 aa13.53□□□□□ -0.24
CCBE1-203ENST00000589116 RPN1P04843 607 aaKnown RBP13.53□□□□□ -0.24
CCBE1-203ENST00000589116 CCT6AP40227 531 aaKnown RBP13.53□□□□□ -0.24
CCBE1-203ENST00000589116 SNAPC2Q13487 334 aa13.53□□□□□ -0.24
CCBE1-203ENST00000589116 ISM2Q6H9L7 571 aa13.53□□□□□ -0.24
CCBE1-203ENST00000589116 SV2BQ7L1I2 683 aa13.53□□□□□ -0.24
CCBE1-203ENST00000589116 CYP2W1Q8TAV3 490 aa13.53□□□□□ -0.24
CCBE1-203ENST00000589116 STAMQ92783 540 aa13.53□□□□□ -0.24
CCBE1-203ENST00000589116 SLC10A4Q96EP9 437 aa13.53□□□□□ -0.24
CCBE1-203ENST00000589116 C7orf25Q9BPX7 421 aa13.53□□□□□ -0.24
CCBE1-203ENST00000589116 WDR11Q9BZH6 1224 aa13.53□□□□□ -0.24
CCBE1-203ENST00000589116 VAV3Q9UKW4 847 aa13.53□□□□□ -0.24
CCBE1-203ENST00000589116 PSMD10O75832 226 aa13.52□□□□□ -0.25
CCBE1-203ENST00000589116 CELF2O95319 508 aaKnown RBP13.52□□□□□ -0.25
CCBE1-203ENST00000589116 ADCY5O95622 1261 aa13.52□□□□□ -0.25
CCBE1-203ENST00000589116 OSBPP22059 807 aa13.52□□□□□ -0.25
CCBE1-203ENST00000589116 ERCC5P28715 1186 aaPredicted RBP13.52□□□□□ -0.25
CCBE1-203ENST00000589116 COPB2P35606 906 aa13.52□□□□□ -0.25
CCBE1-203ENST00000589116 UBXN2AP68543 259 aa13.52□□□□□ -0.25
CCBE1-203ENST00000589116 MYL5Q02045 173 aa13.52□□□□□ -0.25
CCBE1-203ENST00000589116 PPP2R5CQ13362 524 aa13.52□□□□□ -0.25
CCBE1-203ENST00000589116 MOGSQ13724 837 aa13.52□□□□□ -0.25
CCBE1-203ENST00000589116 BAATQ14032 418 aaPredicted RBP13.52□□□□□ -0.25
CCBE1-203ENST00000589116 PLS1Q14651 629 aa13.52□□□□□ -0.25
CCBE1-203ENST00000589116 PGM5Q15124 567 aa13.52□□□□□ -0.25
CCBE1-203ENST00000589116 LRCH2Q5VUJ6 765 aa13.52□□□□□ -0.25
CCBE1-203ENST00000589116 CNNM4Q6P4Q7 775 aa13.52□□□□□ -0.25
CCBE1-203ENST00000589116 SARM1Q6SZW1 724 aa13.52□□□□□ -0.25
CCBE1-203ENST00000589116 SAPCD2Q86UD0 394 aa13.52□□□□□ -0.25
CCBE1-203ENST00000589116 RIOX2Q8IUF8 465 aa13.52□□□□□ -0.25
CCBE1-203ENST00000589116 LRRC15Q8TF66 581 aa13.52□□□□□ -0.25
CCBE1-203ENST00000589116 RAD54LQ92698 747 aa13.52□□□□□ -0.25
CCBE1-203ENST00000589116 GJA10Q969M2 543 aa13.52□□□□□ -0.25
CCBE1-203ENST00000589116 CCDC47Q96A33 483 aaKnown RBP13.52□□□□□ -0.25
CCBE1-203ENST00000589116 TAAR1Q96RJ0 339 aa13.52□□□□□ -0.25
CCBE1-203ENST00000589116 RMDN3Q96TC7 470 aa13.52□□□□□ -0.25
CCBE1-203ENST00000589116 PLIN2Q99541 437 aa13.52□□□□□ -0.25
CCBE1-203ENST00000589116 RIT2Q99578 217 aa13.52□□□□□ -0.25
CCBE1-203ENST00000589116 TRIM9Q9C026 710 aa13.52□□□□□ -0.25
CCBE1-203ENST00000589116 ASCC2Q9H1I8 757 aaPredicted RBP13.52□□□□□ -0.25
CCBE1-203ENST00000589116 BLZF1Q9H2G9 400 aa13.52□□□□□ -0.25
CCBE1-203ENST00000589116 ZNF408Q9H9D4 720 aa13.52□□□□□ -0.25
CCBE1-203ENST00000589116 GBA2Q9HCG7 927 aaPredicted RBP13.52□□□□□ -0.25
CCBE1-203ENST00000589116 PXMP2Q9NR77 195 aa13.52□□□□□ -0.25
CCBE1-203ENST00000589116 BLOC1S4Q9NUP1 217 aa13.52□□□□□ -0.25
CCBE1-203ENST00000589116 UBIAD1Q9Y5Z9 338 aa13.52□□□□□ -0.25
CCBE1-203ENST00000589116 RPA1P27694 616 aa13.51□□□□□ -0.25
CCBE1-203ENST00000589116 CASP1P29466 404 aa13.51□□□□□ -0.25
CCBE1-203ENST00000589116 HERVK_113P62684 666 aa13.51□□□□□ -0.25
CCBE1-203ENST00000589116 ZNF658Q5TYW1 1059 aaPredicted RBP13.51□□□□□ -0.25
CCBE1-203ENST00000589116 ARHGEF16Q5VV41 709 aa13.51□□□□□ -0.25
CCBE1-203ENST00000589116 NCAPH2Q6IBW4 605 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms