RNA–Protein interactions for RNA: ENST00000588534.1

ZNF554-202, Transcript of zinc finger protein 554, humanhuman

TSL 2

Gene ZNF554, Length 4,029 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF554-202ENST00000588534 SPA17Q15506 151 aa8.3□□□□□ -1.08
ZNF554-202ENST00000588534 ODF2Q5BJF6 829 aa8.3□□□□□ -1.08
ZNF554-202ENST00000588534 ODR4Q5SWX8 454 aa8.3□□□□□ -1.08
ZNF554-202ENST00000588534 ISM2Q6H9L7 571 aa8.3□□□□□ -1.08
ZNF554-202ENST00000588534 TCP11Q8WWU5 503 aa8.3□□□□□ -1.08
ZNF554-202ENST00000588534 TBC1D5Q92609 795 aa8.3□□□□□ -1.08
ZNF554-202ENST00000588534 METTL14Q9HCE5 456 aaKnown RBP8.3□□□□□ -1.08
ZNF554-202ENST00000588534 PANK4Q9NVE7 773 aa8.3□□□□□ -1.08
ZNF554-202ENST00000588534 PVALEFA0A1B0GWK0 134 aa8.3□□□□□ -1.08
ZNF554-202ENST00000588534 SPDYE5A6NIY4 337 aa8.3□□□□□ -1.08
ZNF554-202ENST00000588534 EIF3JO75822 258 aaKnown RBP8.3□□□□□ -1.08
ZNF554-202ENST00000588534 VGLL4Q14135 290 aa8.3□□□□□ -1.08
ZNF554-202ENST00000588534 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.3□□□□□ -1.08
ZNF554-202ENST00000588534 FAM178BQ8IXR5 827 aa8.3□□□□□ -1.08
ZNF554-202ENST00000588534 SMAP1Q8IYB5 467 aaPredicted RBP8.3□□□□□ -1.08
ZNF554-202ENST00000588534 CSGALNACT2Q8N6G5 542 aa8.3□□□□□ -1.08
ZNF554-202ENST00000588534 PGBD1Q96JS3 809 aa8.3□□□□□ -1.08
ZNF554-202ENST00000588534 RANBP17Q9H2T7 1088 aaKnown RBP8.3□□□□□ -1.08
ZNF554-202ENST00000588534 SEL1LQ9UBV2 794 aa8.3□□□□□ -1.08
ZNF554-202ENST00000588534 GOLGA6L9A6NEM1 432 aa8.3□□□□□ -1.08
ZNF554-202ENST00000588534 CLCN1P35523 988 aa8.3□□□□□ -1.08
ZNF554-202ENST00000588534 KARSQ15046 597 aaKnown RBP8.3□□□□□ -1.08
ZNF554-202ENST00000588534 PDXDC2PQ6P474 469 aa8.3□□□□□ -1.08
ZNF554-202ENST00000588534 NIPA1Q7RTP0 329 aa8.3□□□□□ -1.08
ZNF554-202ENST00000588534 ELOA2Q8IYF1 753 aaPredicted RBP8.3□□□□□ -1.08
ZNF554-202ENST00000588534 TRMT44Q8IYL2 757 aaKnown RBP8.3□□□□□ -1.08
ZNF554-202ENST00000588534 SPC24Q8NBT2 197 aa8.3□□□□□ -1.08
ZNF554-202ENST00000588534 NUDT12Q9BQG2 462 aa8.3□□□□□ -1.08
ZNF554-202ENST00000588534 NUP58Q9BVL2 599 aa8.3□□□□□ -1.08
ZNF554-202ENST00000588534 TMEM206Q9H813 350 aa8.3□□□□□ -1.08
ZNF554-202ENST00000588534 SHANK3Q9BYB0 1731 aa8.3□□□□□ -1.08
ZNF554-202ENST00000588534 SYNRGQ9UMZ2 1314 aa8.29□□□□□ -1.08
ZNF554-202ENST00000588534 PHACTR2O75167 634 aa8.29□□□□□ -1.08
ZNF554-202ENST00000588534 SNHG28P0DPA3 235 aa8.29□□□□□ -1.08
ZNF554-202ENST00000588534 ZBTB48P10074 688 aaPredicted RBP8.29□□□□□ -1.08
ZNF554-202ENST00000588534 CNGA1P29973 690 aa8.29□□□□□ -1.08
ZNF554-202ENST00000588534 SREBF1P36956 1147 aa8.29□□□□□ -1.08
ZNF554-202ENST00000588534 QARSP47897 775 aaKnown RBP8.29□□□□□ -1.08
ZNF554-202ENST00000588534 FCGRTP55899 365 aa8.29□□□□□ -1.08
ZNF554-202ENST00000588534 PSMC5P62195 406 aa8.29□□□□□ -1.08
ZNF554-202ENST00000588534 CDC42EP1Q00587 391 aa8.29□□□□□ -1.08
ZNF554-202ENST00000588534 CATSPERGQ6ZRH7 1159 aa8.29□□□□□ -1.08
ZNF554-202ENST00000588534 DYMQ7RTS9 669 aa8.29□□□□□ -1.08
ZNF554-202ENST00000588534 CCDC84Q86UT8 332 aaPredicted RBP8.29□□□□□ -1.08
ZNF554-202ENST00000588534 ZNF384Q8TF68 577 aa8.29□□□□□ -1.08
ZNF554-202ENST00000588534 MXRA8Q9BRK3 442 aa8.29□□□□□ -1.08
ZNF554-202ENST00000588534 KCND2Q9NZV8 630 aa8.29□□□□□ -1.08
ZNF554-202ENST00000588534 PCDHA10Q9Y5I2 948 aa8.29□□□□□ -1.08
ZNF554-202ENST00000588534 NID2Q14112 1375 aa8.29□□□□□ -1.08
ZNF554-202ENST00000588534 LOC102724159A0A0B4J2E5 919 aa8.29□□□□□ -1.08
ZNF554-202ENST00000588534 VWA5AO00534 786 aa8.29□□□□□ -1.08
ZNF554-202ENST00000588534 GCNT3O95395 438 aa8.29□□□□□ -1.08
ZNF554-202ENST00000588534 HERVK_113P62684 666 aa8.29□□□□□ -1.08
ZNF554-202ENST00000588534 UBXN2AP68543 259 aa8.29□□□□□ -1.08
ZNF554-202ENST00000588534 PWP2Q15269 919 aaKnown RBP8.29□□□□□ -1.08
ZNF554-202ENST00000588534 SCFD2Q8WU76 684 aa8.29□□□□□ -1.08
ZNF554-202ENST00000588534 FNBP1Q96RU3 617 aa8.29□□□□□ -1.08
ZNF554-202ENST00000588534 TMEM260Q9NX78 707 aa8.29□□□□□ -1.08
ZNF554-202ENST00000588534 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.29□□□□□ -1.08
ZNF554-202ENST00000588534 IGKV6D-41A0A0C4DH26 115 aa8.29□□□□□ -1.08
ZNF554-202ENST00000588534 ADCY5O95622 1261 aa8.29□□□□□ -1.08
ZNF554-202ENST00000588534 PLA2G4BP0C869 781 aa8.29□□□□□ -1.08
ZNF554-202ENST00000588534 FXR2P51116 673 aaKnown RBP eCLIP8.29□□□□□ -1.08
ZNF554-202ENST00000588534 CEP170P1Q96L14 293 aa8.29□□□□□ -1.08
ZNF554-202ENST00000588534 C12orf42Q96LP6 360 aa8.29□□□□□ -1.08
ZNF554-202ENST00000588534 SLC38A10Q9HBR0 1119 aa8.29□□□□□ -1.08
ZNF554-202ENST00000588534 N4BP1O75113 896 aaKnown RBP8.28□□□□□ -1.08
ZNF554-202ENST00000588534 RGS2P41220 211 aa8.28□□□□□ -1.08
ZNF554-202ENST00000588534 VWA3BQ502W6 1294 aa8.28□□□□□ -1.08
ZNF554-202ENST00000588534 FAM102BQ5T8I3 360 aa8.28□□□□□ -1.08
ZNF554-202ENST00000588534 UTP14CQ5TAP6 766 aaKnown RBP8.28□□□□□ -1.08
ZNF554-202ENST00000588534 RGMBQ6NW40 437 aa8.28□□□□□ -1.08
ZNF554-202ENST00000588534 PLEKHH3Q7Z736 793 aa8.28□□□□□ -1.08
ZNF554-202ENST00000588534 NBPF11Q86T75 865 aa8.28□□□□□ -1.08
ZNF554-202ENST00000588534 SHCBP1Q8NEM2 672 aa8.28□□□□□ -1.08
ZNF554-202ENST00000588534 SPAG5Q96R06 1193 aa8.28□□□□□ -1.08
ZNF554-202ENST00000588534 SPATC1LQ9H0A9 340 aa8.28□□□□□ -1.08
ZNF554-202ENST00000588534 GJB4Q9NTQ9 266 aa8.28□□□□□ -1.08
ZNF554-202ENST00000588534 FAM217BQ9NTX9 383 aaPredicted RBP8.28□□□□□ -1.08
ZNF554-202ENST00000588534 TMEM63CQ9P1W3 806 aa8.28□□□□□ -1.08
ZNF554-202ENST00000588534 ZDHHC9Q9Y397 364 aa8.28□□□□□ -1.08
ZNF554-202ENST00000588534 MYH3P11055 1940 aa8.28□□□□□ -1.08
ZNF554-202ENST00000588534 USO1O60763 962 aaKnown RBP8.28□□□□□ -1.08
ZNF554-202ENST00000588534 DTNBO60941 627 aa8.28□□□□□ -1.08
ZNF554-202ENST00000588534 PLCG1P19174 1290 aa8.28□□□□□ -1.08
ZNF554-202ENST00000588534 RPS6P62753 249 aaKnown RBP8.28□□□□□ -1.08
ZNF554-202ENST00000588534 CYP4A11Q02928 519 aa8.28□□□□□ -1.08
ZNF554-202ENST00000588534 NOGQ13253 232 aa8.28□□□□□ -1.08
ZNF554-202ENST00000588534 PKN1Q16512 942 aa8.28□□□□□ -1.08
ZNF554-202ENST00000588534 ZNF658Q5TYW1 1059 aaPredicted RBP8.28□□□□□ -1.08
ZNF554-202ENST00000588534 METTL16Q86W50 562 aaKnown RBP8.28□□□□□ -1.08
ZNF554-202ENST00000588534 AGBL1Q96MI9 1066 aa8.28□□□□□ -1.08
ZNF554-202ENST00000588534 ADPGKQ9BRR6 497 aa8.28□□□□□ -1.08
ZNF554-202ENST00000588534 PARVGQ9HBI0 331 aa8.28□□□□□ -1.08
ZNF554-202ENST00000588534 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.28□□□□□ -1.08
ZNF554-202ENST00000588534 SEPT9Q9UHD8 586 aaPredicted RBP8.28□□□□□ -1.08
ZNF554-202ENST00000588534 PCDHA5Q9Y5H7 936 aa8.28□□□□□ -1.08
ZNF554-202ENST00000588534 IRS2Q9Y4H2 1338 aa8.28□□□□□ -1.08
ZNF554-202ENST00000588534 KIF28PB7ZC32 967 aa8.28□□□□□ -1.08
ZNF554-202ENST00000588534 PIK3CDO00329 1044 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms