RNA–Protein interactions for RNA: ENST00000588344.2

CIRBP-218, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 370 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-218ENST00000588344 PGBD1Q96JS3 809 aa10.3□□□□□ -0.76
CIRBP-218ENST00000588344 TSEN34Q9BSV6 310 aaKnown RBP10.3□□□□□ -0.76
CIRBP-218ENST00000588344 CRISPLD2Q9H0B8 497 aa10.3□□□□□ -0.76
CIRBP-218ENST00000588344 MLXIPQ9HAP2 919 aa10.3□□□□□ -0.76
CIRBP-218ENST00000588344 XPNPEP3Q9NQH7 507 aa10.3□□□□□ -0.76
CIRBP-218ENST00000588344 PDGFCQ9NRA1 345 aa10.3□□□□□ -0.76
CIRBP-218ENST00000588344 TBC1D22BQ9NU19 505 aa10.3□□□□□ -0.76
CIRBP-218ENST00000588344 OGDHLQ9ULD0 1010 aa10.3□□□□□ -0.76
CIRBP-218ENST00000588344 GNEQ9Y223 722 aaKnown RBP10.3□□□□□ -0.76
CIRBP-218ENST00000588344 HTTP42858 3142 aa10.3□□□□□ -0.76
CIRBP-218ENST00000588344 BAZ2BQ9UIF8 2168 aaKnown RBP10.29□□□□□ -0.76
CIRBP-218ENST00000588344 TBX3O15119 743 aa10.29□□□□□ -0.76
CIRBP-218ENST00000588344 DYNC1LI2O43237 492 aaPredicted RBP10.29□□□□□ -0.76
CIRBP-218ENST00000588344 STX6O43752 255 aa10.29□□□□□ -0.76
CIRBP-218ENST00000588344 BAG4O95429 457 aaKnown RBP10.29□□□□□ -0.76
CIRBP-218ENST00000588344 SMPD1P17405 629 aa10.29□□□□□ -0.76
CIRBP-218ENST00000588344 FOSBP53539 338 aa10.29□□□□□ -0.76
CIRBP-218ENST00000588344 LY6KQ17RY6 165 aa10.29□□□□□ -0.76
CIRBP-218ENST00000588344 INF2Q27J81 1249 aa10.29□□□□□ -0.76
CIRBP-218ENST00000588344 LETM2Q2VYF4 491 aa10.29□□□□□ -0.76
CIRBP-218ENST00000588344 PRR16Q569H4 304 aa10.29□□□□□ -0.76
CIRBP-218ENST00000588344 RILPL1Q5EBL4 403 aa10.29□□□□□ -0.76
CIRBP-218ENST00000588344 CELF3Q5SZQ8 465 aaKnown RBP10.29□□□□□ -0.76
CIRBP-218ENST00000588344 METTL7BQ6UX53 244 aa10.29□□□□□ -0.76
CIRBP-218ENST00000588344 PLA2G4DQ86XP0 818 aa10.29□□□□□ -0.76
CIRBP-218ENST00000588344 PCSK9Q8NBP7 692 aaKnown RBP10.29□□□□□ -0.76
CIRBP-218ENST00000588344 OR6J1Q8NGC5 347 aa10.29□□□□□ -0.76
CIRBP-218ENST00000588344 FAM20AQ96MK3 541 aa10.29□□□□□ -0.76
CIRBP-218ENST00000588344 MBOAT7Q96N66 472 aa10.29□□□□□ -0.76
CIRBP-218ENST00000588344 SDF4Q9BRK5 362 aa10.29□□□□□ -0.76
CIRBP-218ENST00000588344 UPF3AQ9H1J1 476 aaKnown RBP10.29□□□□□ -0.76
CIRBP-218ENST00000588344 KCNH7Q9NS40 1196 aa10.29□□□□□ -0.76
CIRBP-218ENST00000588344 FOXD4L1Q9NU39 408 aa10.29□□□□□ -0.76
CIRBP-218ENST00000588344 DDX25Q9UHL0 483 aaKnown RBP10.29□□□□□ -0.76
CIRBP-218ENST00000588344 TCEAL9Q9UHQ7 104 aa10.29□□□□□ -0.76
CIRBP-218ENST00000588344 NFASCO94856 1347 aa10.29□□□□□ -0.76
CIRBP-218ENST00000588344 MGAMO43451 1857 aa10.28□□□□□ -0.76
CIRBP-218ENST00000588344 IGLV3-22A0A075B6J6 115 aa10.28□□□□□ -0.76
CIRBP-218ENST00000588344 VPS37CA5D8V6 355 aaPredicted RBP10.28□□□□□ -0.76
CIRBP-218ENST00000588344 MOXD2PA6NHM9 499 aa10.28□□□□□ -0.76
CIRBP-218ENST00000588344 A6NJR5 290 aa10.28□□□□□ -0.76
CIRBP-218ENST00000588344 KBTBD13C9JR72 458 aa10.28□□□□□ -0.76
CIRBP-218ENST00000588344 FAM86B1E9PN63 330 aa10.28□□□□□ -0.76
CIRBP-218ENST00000588344 IPO5O00410 1097 aaKnown RBP10.28□□□□□ -0.76
CIRBP-218ENST00000588344 DNM1LO00429 736 aa10.28□□□□□ -0.76
CIRBP-218ENST00000588344 ADAMTS3O15072 1205 aa10.28□□□□□ -0.76
CIRBP-218ENST00000588344 MARCH6O60337 910 aa10.28□□□□□ -0.76
CIRBP-218ENST00000588344 CCNT1O60563 726 aaKnown RBP10.28□□□□□ -0.76
CIRBP-218ENST00000588344 PPFIA4O75335 1185 aa10.28□□□□□ -0.76
CIRBP-218ENST00000588344 MYCP01106 439 aaPredicted RBP10.28□□□□□ -0.76
CIRBP-218ENST00000588344 FAM86B2P0C5J1 330 aa10.28□□□□□ -0.76
CIRBP-218ENST00000588344 CST5P28325 142 aaPredicted RBP10.28□□□□□ -0.76
CIRBP-218ENST00000588344 MYSM1Q5VVJ2 828 aa10.28□□□□□ -0.76
CIRBP-218ENST00000588344 TLK2Q86UE8 772 aa10.28□□□□□ -0.76
CIRBP-218ENST00000588344 SLFN12Q8IYM2 578 aa10.28□□□□□ -0.76
CIRBP-218ENST00000588344 PPTC7Q8NI37 304 aa10.28□□□□□ -0.76
CIRBP-218ENST00000588344 RIT2Q99578 217 aa10.28□□□□□ -0.76
CIRBP-218ENST00000588344 ZNF577Q9BSK1 485 aa10.28□□□□□ -0.76
CIRBP-218ENST00000588344 SEZ6LQ9BYH1 1024 aa10.28□□□□□ -0.76
CIRBP-218ENST00000588344 AGO4Q9HCK5 861 aaKnown RBP10.28□□□□□ -0.76
CIRBP-218ENST00000588344 PLXNB2O15031 1838 aa10.28□□□□□ -0.76
CIRBP-218ENST00000588344 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.27□□□□□ -0.77
CIRBP-218ENST00000588344 CCDC85CA6NKD9 419 aa10.27□□□□□ -0.77
CIRBP-218ENST00000588344 LAD1O00515 517 aa10.27□□□□□ -0.77
CIRBP-218ENST00000588344 NOP56O00567 594 aaKnown RBP10.27□□□□□ -0.77
CIRBP-218ENST00000588344 ADAMTS4O75173 837 aa10.27□□□□□ -0.77
CIRBP-218ENST00000588344 CABYRO75952 493 aa10.27□□□□□ -0.77
CIRBP-218ENST00000588344 ARIH2O95376 493 aa10.27□□□□□ -0.77
CIRBP-218ENST00000588344 GGPS1O95749 300 aa10.27□□□□□ -0.77
CIRBP-218ENST00000588344 BMP15O95972 392 aa10.27□□□□□ -0.77
CIRBP-218ENST00000588344 C6orf222P0C671 652 aaPredicted RBP10.27□□□□□ -0.77
CIRBP-218ENST00000588344 ARP10275 920 aa10.27□□□□□ -0.77
CIRBP-218ENST00000588344 KCNA2P16389 499 aa10.27□□□□□ -0.77
CIRBP-218ENST00000588344 LRRC41Q15345 812 aa10.27□□□□□ -0.77
CIRBP-218ENST00000588344 FSCN1Q16658 493 aaKnown RBP10.27□□□□□ -0.77
CIRBP-218ENST00000588344 GNASQ5JWF2 1037 aa10.27□□□□□ -0.77
CIRBP-218ENST00000588344 KLHDC9Q8NEP7 349 aa10.27□□□□□ -0.77
CIRBP-218ENST00000588344 CYP2W1Q8TAV3 490 aa10.27□□□□□ -0.77
CIRBP-218ENST00000588344 SEPT1Q8WYJ6 367 aa10.27□□□□□ -0.77
CIRBP-218ENST00000588344 TNPO1Q92973 898 aaKnown RBP10.27□□□□□ -0.77
CIRBP-218ENST00000588344 POLR3EQ9NVU0 708 aa10.27□□□□□ -0.77
CIRBP-218ENST00000588344 CEP131Q9UPN4 1083 aa10.27□□□□□ -0.77
CIRBP-218ENST00000588344 MTMR6Q9Y217 621 aa10.27□□□□□ -0.77
CIRBP-218ENST00000588344 DDX49Q9Y6V7 483 aaKnown RBP10.27□□□□□ -0.77
CIRBP-218ENST00000588344 EDIL3O43854 480 aa10.26□□□□□ -0.77
CIRBP-218ENST00000588344 NEMFO60524 1076 aa10.26□□□□□ -0.77
CIRBP-218ENST00000588344 ATP9AO75110 1047 aa10.26□□□□□ -0.77
CIRBP-218ENST00000588344 PGK1P00558 417 aa10.26□□□□□ -0.77
CIRBP-218ENST00000588344 ZSCAN22P10073 491 aaPredicted RBP10.26□□□□□ -0.77
CIRBP-218ENST00000588344 UBA1P22314 1058 aaKnown RBP10.26□□□□□ -0.77
CIRBP-218ENST00000588344 KRT76Q01546 638 aa10.26□□□□□ -0.77
CIRBP-218ENST00000588344 SP2Q02086 613 aa10.26□□□□□ -0.77
CIRBP-218ENST00000588344 ARHGAP1Q07960 439 aa10.26□□□□□ -0.77
CIRBP-218ENST00000588344 SEMA3FQ13275 785 aa10.26□□□□□ -0.77
CIRBP-218ENST00000588344 DGKDQ16760 1214 aa10.26□□□□□ -0.77
CIRBP-218ENST00000588344 EARS2Q5JPH6 523 aaKnown RBP10.26□□□□□ -0.77
CIRBP-218ENST00000588344 TTC38Q5R3I4 469 aa10.26□□□□□ -0.77
CIRBP-218ENST00000588344 ATL3Q6DD88 541 aa10.26□□□□□ -0.77
CIRBP-218ENST00000588344 ZNF746Q6NUN9 644 aaPredicted RBP10.26□□□□□ -0.77
CIRBP-218ENST00000588344 CYFIP1Q7L576 1253 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms