RNA–Protein interactions for RNA: ENST00000586253.1

SMAD4-204, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 784 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-204ENST00000586253 CCT2P78371 535 aaKnown RBP9.24□□□□□ -0.93
SMAD4-204ENST00000586253 SCRN1Q12765 414 aa9.24□□□□□ -0.93
SMAD4-204ENST00000586253 BAATQ14032 418 aaPredicted RBP9.24□□□□□ -0.93
SMAD4-204ENST00000586253 BRICD5Q6PL45 260 aa9.24□□□□□ -0.93
SMAD4-204ENST00000586253 CCDC82Q8N4S0 544 aa9.24□□□□□ -0.93
SMAD4-204ENST00000586253 DNERQ8NFT8 737 aa9.24□□□□□ -0.93
SMAD4-204ENST00000586253 FGD4Q96M96 766 aa9.24□□□□□ -0.93
SMAD4-204ENST00000586253 TINF2Q9BSI4 451 aa9.24□□□□□ -0.93
SMAD4-204ENST00000586253 SLKQ9H2G2 1235 aaPredicted RBP9.24□□□□□ -0.93
SMAD4-204ENST00000586253 FLRT1Q9NZU1 646 aa9.24□□□□□ -0.93
SMAD4-204ENST00000586253 BIN2Q9UBW5 565 aaPredicted RBP9.24□□□□□ -0.93
SMAD4-204ENST00000586253 ADD3Q9UEY8 706 aaKnown RBP9.24□□□□□ -0.93
SMAD4-204ENST00000586253 DACH1Q9UI36 760 aa9.24□□□□□ -0.93
SMAD4-204ENST00000586253 RPTORQ8N122 1335 aa9.24□□□□□ -0.93
SMAD4-204ENST00000586253 ASB14A6NK59 587 aa9.23□□□□□ -0.93
SMAD4-204ENST00000586253 B4DLN1 442 aa9.23□□□□□ -0.93
SMAD4-204ENST00000586253 PIK3CDO00329 1044 aa9.23□□□□□ -0.93
SMAD4-204ENST00000586253 CPLX1O14810 134 aa9.23□□□□□ -0.93
SMAD4-204ENST00000586253 MRPL12P52815 198 aaKnown RBP9.23□□□□□ -0.93
SMAD4-204ENST00000586253 AKAP17AQ02040 695 aaKnown RBP9.23□□□□□ -0.93
SMAD4-204ENST00000586253 CNTN2Q02246 1040 aa9.23□□□□□ -0.93
SMAD4-204ENST00000586253 CACNB2Q08289 660 aaPredicted RBP9.23□□□□□ -0.93
SMAD4-204ENST00000586253 ME3Q16798 604 aa9.23□□□□□ -0.93
SMAD4-204ENST00000586253 PFKFB3Q16875 520 aaPredicted RBP9.23□□□□□ -0.93
SMAD4-204ENST00000586253 SLC30A10Q6XR72 485 aa9.23□□□□□ -0.93
SMAD4-204ENST00000586253 HEATR3Q7Z4Q2 680 aa9.23□□□□□ -0.93
SMAD4-204ENST00000586253 TRIM22Q8IYM9 498 aa9.23□□□□□ -0.93
SMAD4-204ENST00000586253 FAM177A1Q8N128 213 aaPredicted RBP9.23□□□□□ -0.93
SMAD4-204ENST00000586253 MORC4Q8TE76 937 aa9.23□□□□□ -0.93
SMAD4-204ENST00000586253 PIBF1Q8WXW3 757 aa9.23□□□□□ -0.93
SMAD4-204ENST00000586253 GTF3C6Q969F1 213 aa9.23□□□□□ -0.93
SMAD4-204ENST00000586253 MPHOSPH6Q99547 160 aaKnown RBP9.23□□□□□ -0.93
SMAD4-204ENST00000586253 GLT8D2Q9H1C3 349 aa9.23□□□□□ -0.93
SMAD4-204ENST00000586253 NCOA5Q9HCD5 579 aaKnown RBP9.23□□□□□ -0.93
SMAD4-204ENST00000586253 HMX1Q9NP08 348 aaPredicted RBP9.23□□□□□ -0.93
SMAD4-204ENST00000586253 PAK6Q9NQU5 681 aaPredicted RBP9.23□□□□□ -0.93
SMAD4-204ENST00000586253 PRDM9Q9NQV7 894 aa9.23□□□□□ -0.93
SMAD4-204ENST00000586253 LIMCH1Q9UPQ0 1083 aa9.23□□□□□ -0.93
SMAD4-204ENST00000586253 FCF1Q9Y324 198 aaKnown RBP9.23□□□□□ -0.93
SMAD4-204ENST00000586253 STK36Q9NRP7 1315 aa9.23□□□□□ -0.93
SMAD4-204ENST00000586253 BRCA2P51587 3418 aa9.22□□□□□ -0.93
SMAD4-204ENST00000586253 KIAA0100Q14667 2235 aaKnown RBP9.22□□□□□ -0.93
SMAD4-204ENST00000586253 hCG_1642624A0A1W2PR95 340 aa9.22□□□□□ -0.93
SMAD4-204ENST00000586253 DDX11L8A8MPP1 907 aa9.22□□□□□ -0.93
SMAD4-204ENST00000586253 GCOM1H8Y6P7 765 aaPredicted RBP9.22□□□□□ -0.93
SMAD4-204ENST00000586253 STXBP3O00186 592 aa9.22□□□□□ -0.93
SMAD4-204ENST00000586253 MSCO60682 206 aa9.22□□□□□ -0.93
SMAD4-204ENST00000586253 CFBP00751 764 aa9.22□□□□□ -0.93
SMAD4-204ENST00000586253 POLR2MP0CAP2 368 aa9.22□□□□□ -0.93
SMAD4-204ENST00000586253 CYBAP13498 195 aa9.22□□□□□ -0.93
SMAD4-204ENST00000586253 CCL5P13501 91 aa9.22□□□□□ -0.93
SMAD4-204ENST00000586253 SCG2P13521 617 aa9.22□□□□□ -0.93
SMAD4-204ENST00000586253 CALML3P27482 149 aa9.22□□□□□ -0.93
SMAD4-204ENST00000586253 CYP2C19P33261 490 aa9.22□□□□□ -0.93
SMAD4-204ENST00000586253 MCM2P49736 904 aa9.22□□□□□ -0.93
SMAD4-204ENST00000586253 ALDH5A1P51649 535 aaPredicted RBP9.22□□□□□ -0.93
SMAD4-204ENST00000586253 SSRP1Q08945 709 aaKnown RBP9.22□□□□□ -0.93
SMAD4-204ENST00000586253 TRIM32Q13049 653 aa9.22□□□□□ -0.93
SMAD4-204ENST00000586253 STK3Q13188 491 aa9.22□□□□□ -0.93
SMAD4-204ENST00000586253 MTFR1Q15390 333 aa9.22□□□□□ -0.93
SMAD4-204ENST00000586253 PKN1Q16512 942 aa9.22□□□□□ -0.93
SMAD4-204ENST00000586253 WWC2Q6AWC2 1192 aa9.22□□□□□ -0.93
SMAD4-204ENST00000586253 ARMCX2Q7L311 632 aa9.22□□□□□ -0.93
SMAD4-204ENST00000586253 SYTL5Q8TDW5 730 aaPredicted RBP9.22□□□□□ -0.93
SMAD4-204ENST00000586253 NSUN6Q8TEA1 469 aaKnown RBP9.22□□□□□ -0.93
SMAD4-204ENST00000586253 CCDC12Q8WUD4 166 aaPredicted RBP9.22□□□□□ -0.93
SMAD4-204ENST00000586253 PHKBQ93100 1093 aa9.22□□□□□ -0.93
SMAD4-204ENST00000586253 ZSCAN31Q96LW9 406 aaPredicted RBP9.22□□□□□ -0.93
SMAD4-204ENST00000586253 REPIN1Q9BWE0 567 aaKnown RBP9.22□□□□□ -0.93
SMAD4-204ENST00000586253 RNF208Q9H0X6 261 aa9.22□□□□□ -0.93
SMAD4-204ENST00000586253 UNC93B1Q9H1C4 597 aa9.22□□□□□ -0.93
SMAD4-204ENST00000586253 ABHD16BQ9H3Z7 469 aa9.22□□□□□ -0.93
SMAD4-204ENST00000586253 SH2B1Q9NRF2 756 aaPredicted RBP9.22□□□□□ -0.93
SMAD4-204ENST00000586253 BARHL2Q9NY43 387 aa9.22□□□□□ -0.93
SMAD4-204ENST00000586253 CNPY2Q9Y2B0 182 aa9.22□□□□□ -0.93
SMAD4-204ENST00000586253 MCM3APO60318 1980 aa9.22□□□□□ -0.93
SMAD4-204ENST00000586253 ASTN1O14525 1302 aa9.22□□□□□ -0.93
SMAD4-204ENST00000586253 ESYT2A0FGR8 921 aa9.21□□□□□ -0.94
SMAD4-204ENST00000586253 SEPT4O43236 478 aa9.21□□□□□ -0.94
SMAD4-204ENST00000586253 DEXIO95424 95 aa9.21□□□□□ -0.94
SMAD4-204ENST00000586253 SNAI1O95863 264 aaPredicted RBP9.21□□□□□ -0.94
SMAD4-204ENST00000586253 GJB1P08034 283 aa9.21□□□□□ -0.94
SMAD4-204ENST00000586253 EDNRBP24530 442 aa9.21□□□□□ -0.94
SMAD4-204ENST00000586253 CLCN1P35523 988 aa9.21□□□□□ -0.94
SMAD4-204ENST00000586253 NAPAP54920 295 aa9.21□□□□□ -0.94
SMAD4-204ENST00000586253 FOXC1Q12948 553 aa9.21□□□□□ -0.94
SMAD4-204ENST00000586253 RDH13Q8NBN7 331 aa9.21□□□□□ -0.94
SMAD4-204ENST00000586253 CCDC148Q8NFR7 591 aa9.21□□□□□ -0.94
SMAD4-204ENST00000586253 TBC1D5Q92609 795 aa9.21□□□□□ -0.94
SMAD4-204ENST00000586253 GPKOWQ92917 476 aaPredicted RBP eCLIP9.21□□□□□ -0.94
SMAD4-204ENST00000586253 CUL5Q93034 780 aa9.21□□□□□ -0.94
SMAD4-204ENST00000586253 PCMTD1Q96MG8 357 aaPredicted RBP9.21□□□□□ -0.94
SMAD4-204ENST00000586253 IWS1Q96ST2 819 aa9.21□□□□□ -0.94
SMAD4-204ENST00000586253 SLC26A6Q9BXS9 759 aa9.21□□□□□ -0.94
SMAD4-204ENST00000586253 ZMYND12Q9H0C1 365 aa9.21□□□□□ -0.94
SMAD4-204ENST00000586253 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.21□□□□□ -0.94
SMAD4-204ENST00000586253 PSTPIP2Q9H939 334 aa9.21□□□□□ -0.94
SMAD4-204ENST00000586253 SH3GLB2Q9NR46 395 aa9.21□□□□□ -0.94
SMAD4-204ENST00000586253 COL20A1Q9P218 1284 aa9.21□□□□□ -0.94
SMAD4-204ENST00000586253 LRRC37A2A6NM11 1700 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms