RNA–Protein interactions for RNA: ENST00000585726.5

RETREG3-202, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 522 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-202ENST00000585726 MTMR1Q13613 665 aa24.46■■□□□ 1.51
RETREG3-202ENST00000585726 DHX37Q8IY37 1157 aaKnown RBP24.46■■□□□ 1.51
RETREG3-202ENST00000585726 CYP2W1Q8TAV3 490 aa24.46■■□□□ 1.51
RETREG3-202ENST00000585726 MXRA8Q9BRK3 442 aa24.46■■□□□ 1.51
RETREG3-202ENST00000585726 BRMS1Q9HCU9 246 aa24.46■■□□□ 1.51
RETREG3-202ENST00000585726 JADE2Q9NQC1 790 aa24.46■■□□□ 1.51
RETREG3-202ENST00000585726 M0R2N6 131 aa24.45■■□□□ 1.5
RETREG3-202ENST00000585726 GGPS1O95749 300 aa24.45■■□□□ 1.5
RETREG3-202ENST00000585726 ASGR1P07306 291 aa24.45■■□□□ 1.5
RETREG3-202ENST00000585726 TGFB3P10600 412 aa24.45■■□□□ 1.5
RETREG3-202ENST00000585726 UBA1P22314 1058 aaKnown RBP24.45■■□□□ 1.5
RETREG3-202ENST00000585726 CST5P28325 142 aaPredicted RBP24.45■■□□□ 1.5
RETREG3-202ENST00000585726 ICAM3P32942 547 aa24.45■■□□□ 1.5
RETREG3-202ENST00000585726 ACLYP53396 1101 aa24.45■■□□□ 1.5
RETREG3-202ENST00000585726 ATN1P54259 1190 aaPredicted RBP24.45■■□□□ 1.5
RETREG3-202ENST00000585726 ARHGAP1Q07960 439 aa24.45■■□□□ 1.5
RETREG3-202ENST00000585726 PCSK9Q8NBP7 692 aaKnown RBP24.45■■□□□ 1.5
RETREG3-202ENST00000585726 TBCKQ8TEA7 893 aa24.45■■□□□ 1.5
RETREG3-202ENST00000585726 GPRASP2Q96D09 838 aa24.45■■□□□ 1.5
RETREG3-202ENST00000585726 KIAA1217Q5T5P2 1943 aa24.45■■□□□ 1.5
RETREG3-202ENST00000585726 CCDC194A0A1B0GVG4 234 aa24.44■■□□□ 1.5
RETREG3-202ENST00000585726 ZEB2O60315 1214 aa24.44■■□□□ 1.5
RETREG3-202ENST00000585726 MMP1P03956 469 aa24.44■■□□□ 1.5
RETREG3-202ENST00000585726 MYL3P08590 195 aa24.44■■□□□ 1.5
RETREG3-202ENST00000585726 COL6A1P12109 1028 aa24.44■■□□□ 1.5
RETREG3-202ENST00000585726 CPT1AP50416 773 aa24.44■■□□□ 1.5
RETREG3-202ENST00000585726 MLLT1Q03111 559 aaPredicted RBP24.44■■□□□ 1.5
RETREG3-202ENST00000585726 CEP55Q53EZ4 464 aa24.44■■□□□ 1.5
RETREG3-202ENST00000585726 CCSAPQ6IQ19 270 aaPredicted RBP24.44■■□□□ 1.5
RETREG3-202ENST00000585726 KRT25Q7Z3Z0 450 aa24.44■■□□□ 1.5
RETREG3-202ENST00000585726 AFG1LQ8WV93 481 aa24.44■■□□□ 1.5
RETREG3-202ENST00000585726 VTI1AQ96AJ9 217 aa24.44■■□□□ 1.5
RETREG3-202ENST00000585726 TSEN34Q9BSV6 310 aaKnown RBP24.44■■□□□ 1.5
RETREG3-202ENST00000585726 BCAS3Q9H6U6 928 aa24.44■■□□□ 1.5
RETREG3-202ENST00000585726 MLXIPQ9HAP2 919 aa24.44■■□□□ 1.5
RETREG3-202ENST00000585726 PHF24Q9UPV7 400 aa24.44■■□□□ 1.5
RETREG3-202ENST00000585726 SMC3Q9UQE7 1217 aa24.44■■□□□ 1.5
RETREG3-202ENST00000585726 ZSCAN21Q9Y5A6 473 aaPredicted RBP24.44■■□□□ 1.5
RETREG3-202ENST00000585726 A0A1W2PQ45 241 aaPredicted RBP24.43■■□□□ 1.5
RETREG3-202ENST00000585726 A0A1W2PQY0 241 aa24.43■■□□□ 1.5
RETREG3-202ENST00000585726 CYP3A4P08684 503 aa24.43■■□□□ 1.5
RETREG3-202ENST00000585726 GJB2P29033 226 aa24.43■■□□□ 1.5
RETREG3-202ENST00000585726 NKX3-2P78367 333 aa24.43■■□□□ 1.5
RETREG3-202ENST00000585726 NR5A1Q13285 461 aa24.43■■□□□ 1.5
RETREG3-202ENST00000585726 LAMC2Q13753 1193 aa24.43■■□□□ 1.5
RETREG3-202ENST00000585726 NONOQ15233 471 aaKnown RBP eCLIP24.43■■□□□ 1.5
RETREG3-202ENST00000585726 BRDTQ58F21 947 aaPredicted RBP24.43■■□□□ 1.5
RETREG3-202ENST00000585726 CELF3Q5SZQ8 465 aaKnown RBP24.43■■□□□ 1.5
RETREG3-202ENST00000585726 PIK3AP1Q6ZUJ8 805 aa24.43■■□□□ 1.5
RETREG3-202ENST00000585726 CRYGNQ8WXF5 182 aa24.43■■□□□ 1.5
RETREG3-202ENST00000585726 CDHR1Q96JP9 859 aa24.43■■□□□ 1.5
RETREG3-202ENST00000585726 UIMC1Q96RL1 719 aa24.43■■□□□ 1.5
RETREG3-202ENST00000585726 MOXD2PA6NHM9 499 aa24.42■■□□□ 1.5
RETREG3-202ENST00000585726 BTBD18B2RXH4 712 aa24.42■■□□□ 1.5
RETREG3-202ENST00000585726 FAM86B1E9PN63 330 aa24.42■■□□□ 1.5
RETREG3-202ENST00000585726 K7ELQ4 463 aaPredicted RBP24.42■■□□□ 1.5
RETREG3-202ENST00000585726 ATP9AO75110 1047 aa24.42■■□□□ 1.5
RETREG3-202ENST00000585726 FAM86B2P0C5J1 330 aa24.42■■□□□ 1.5
RETREG3-202ENST00000585726 ARP10275 920 aa24.42■■□□□ 1.5
RETREG3-202ENST00000585726 NEDD9Q14511 834 aa24.42■■□□□ 1.5
RETREG3-202ENST00000585726 INF2Q27J81 1249 aa24.42■■□□□ 1.5
RETREG3-202ENST00000585726 CXCL17Q6UXB2 119 aa24.42■■□□□ 1.5
RETREG3-202ENST00000585726 CYFIP1Q7L576 1253 aa24.42■■□□□ 1.5
RETREG3-202ENST00000585726 PLA2G4DQ86XP0 818 aa24.42■■□□□ 1.5
RETREG3-202ENST00000585726 DIS3L2Q8IYB7 885 aaKnown RBP24.42■■□□□ 1.5
RETREG3-202ENST00000585726 SPATA33Q96N06 139 aa24.42■■□□□ 1.5
RETREG3-202ENST00000585726 KCNH7Q9NS40 1196 aa24.42■■□□□ 1.5
RETREG3-202ENST00000585726 SP4Q02446 784 aa24.41■■□□□ 1.5
RETREG3-202ENST00000585726 SAFBQ15424 915 aaKnown RBP eCLIP24.41■■□□□ 1.5
RETREG3-202ENST00000585726 MYSM1Q5VVJ2 828 aa24.41■■□□□ 1.5
RETREG3-202ENST00000585726 DPF3Q92784 378 aa24.41■■□□□ 1.5
RETREG3-202ENST00000585726 HTATIP2Q9BUP3 242 aa24.41■■□□□ 1.5
RETREG3-202ENST00000585726 STARD7Q9NQZ5 370 aa24.41■■□□□ 1.5
RETREG3-202ENST00000585726 FOXD4L1Q9NU39 408 aa24.41■■□□□ 1.5
RETREG3-202ENST00000585726 KIF3AQ9Y496 699 aa24.41■■□□□ 1.5
RETREG3-202ENST00000585726 MEIS1O00470 390 aa24.4■■□□□ 1.5
RETREG3-202ENST00000585726 MAFGO15525 162 aa24.4■■□□□ 1.5
RETREG3-202ENST00000585726 MMP3P08254 477 aa24.4■■□□□ 1.5
RETREG3-202ENST00000585726 CUL4AQ13619 759 aa24.4■■□□□ 1.5
RETREG3-202ENST00000585726 PRR16Q569H4 304 aa24.4■■□□□ 1.5
RETREG3-202ENST00000585726 EARS2Q5JPH6 523 aaKnown RBP24.4■■□□□ 1.5
RETREG3-202ENST00000585726 HSCBQ8IWL3 235 aa24.4■■□□□ 1.5
RETREG3-202ENST00000585726 SNX21Q969T3 373 aa24.4■■□□□ 1.5
RETREG3-202ENST00000585726 GLT1D1Q96MS3 346 aa24.4■■□□□ 1.5
RETREG3-202ENST00000585726 FAM205CA6NFA0 338 aa24.39■■□□□ 1.49
RETREG3-202ENST00000585726 A6NJR5 290 aa24.39■■□□□ 1.49
RETREG3-202ENST00000585726 EDIL3O43854 480 aa24.39■■□□□ 1.49
RETREG3-202ENST00000585726 KCNA2P16389 499 aa24.39■■□□□ 1.49
RETREG3-202ENST00000585726 USP11P51784 963 aa24.39■■□□□ 1.49
RETREG3-202ENST00000585726 LRRC26Q2I0M4 334 aa24.39■■□□□ 1.49
RETREG3-202ENST00000585726 HSDL1Q3SXM5 330 aa24.39■■□□□ 1.49
RETREG3-202ENST00000585726 SLC39A5Q6ZMH5 540 aa24.39■■□□□ 1.49
RETREG3-202ENST00000585726 FBXO18Q8NFZ0 1043 aa24.39■■□□□ 1.49
RETREG3-202ENST00000585726 EMID1Q96A84 441 aaPredicted RBP24.39■■□□□ 1.49
RETREG3-202ENST00000585726 AGO4Q9HCK5 861 aaKnown RBP24.39■■□□□ 1.49
RETREG3-202ENST00000585726 POLR3EQ9NVU0 708 aa24.39■■□□□ 1.49
RETREG3-202ENST00000585726 IGLV3-22A0A075B6J6 115 aa24.38■■□□□ 1.49
RETREG3-202ENST00000585726 NOP56O00567 594 aaKnown RBP24.38■■□□□ 1.49
RETREG3-202ENST00000585726 CHMP4BP1P59074 171 aa24.38■■□□□ 1.49
RETREG3-202ENST00000585726 GNL2Q13823 731 aaKnown RBP24.38■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 101.3 ms