RNA–Protein interactions for RNA: ENST00000584400.5

SMARCD2-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 1,017 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-210ENST00000584400 UBA1P22314 1058 aaKnown RBP31.13■■■□□ 2.57
SMARCD2-210ENST00000584400 AP3B2Q13367 1082 aa31.13■■■□□ 2.57
SMARCD2-210ENST00000584400 MYSM1Q5VVJ2 828 aa31.13■■■□□ 2.57
SMARCD2-210ENST00000584400 MCTP2Q6DN12 878 aa31.13■■■□□ 2.57
SMARCD2-210ENST00000584400 TDHQ8IZJ6 230 aa31.13■■■□□ 2.57
SMARCD2-210ENST00000584400 BADQ92934 168 aa31.13■■■□□ 2.57
SMARCD2-210ENST00000584400 PHKBQ93100 1093 aa31.13■■■□□ 2.57
SMARCD2-210ENST00000584400 IL17RAQ96F46 866 aa31.13■■■□□ 2.57
SMARCD2-210ENST00000584400 ZFP91Q96JP5 570 aaPredicted RBP31.13■■■□□ 2.57
SMARCD2-210ENST00000584400 SLC26A6Q9BXS9 759 aa31.13■■■□□ 2.57
SMARCD2-210ENST00000584400 C6orf50Q9HD87 102 aa31.13■■■□□ 2.57
SMARCD2-210ENST00000584400 GRIN2DO15399 1336 aa31.13■■■□□ 2.57
SMARCD2-210ENST00000584400 ESYT2A0FGR8 921 aa31.12■■■□□ 2.57
SMARCD2-210ENST00000584400 SPATA31C2B4DYI2 1134 aa31.12■■■□□ 2.57
SMARCD2-210ENST00000584400 PPFIA4O75335 1185 aa31.12■■■□□ 2.57
SMARCD2-210ENST00000584400 SUPT20HL2P0C7V6 817 aa31.12■■■□□ 2.57
SMARCD2-210ENST00000584400 GNA11P29992 359 aa31.12■■■□□ 2.57
SMARCD2-210ENST00000584400 PTPN11Q06124 597 aaPredicted RBP31.12■■■□□ 2.57
SMARCD2-210ENST00000584400 NFRKBQ6P4R8 1299 aa31.12■■■□□ 2.57
SMARCD2-210ENST00000584400 GIMAP8Q8ND71 665 aaPredicted RBP31.12■■■□□ 2.57
SMARCD2-210ENST00000584400 GPRASP2Q96D09 838 aa31.12■■■□□ 2.57
SMARCD2-210ENST00000584400 SPATA33Q96N06 139 aa31.12■■■□□ 2.57
SMARCD2-210ENST00000584400 KATNAL1Q9BW62 490 aa31.12■■■□□ 2.57
SMARCD2-210ENST00000584400 NCOA5Q9HCD5 579 aaKnown RBP31.12■■■□□ 2.57
SMARCD2-210ENST00000584400 TBX21Q9UL17 535 aa31.12■■■□□ 2.57
SMARCD2-210ENST00000584400 TIMP1P01033 207 aa31.11■■■□□ 2.57
SMARCD2-210ENST00000584400 CD4P01730 458 aa31.11■■■□□ 2.57
SMARCD2-210ENST00000584400 CCDC148Q8NFR7 591 aa31.11■■■□□ 2.57
SMARCD2-210ENST00000584400 MAFGO15525 162 aa31.1■■■□□ 2.57
SMARCD2-210ENST00000584400 SSRP1Q08945 709 aaKnown RBP31.1■■■□□ 2.57
SMARCD2-210ENST00000584400 SENP7Q9BQF6 1050 aa31.1■■■□□ 2.57
SMARCD2-210ENST00000584400 ZMYND12Q9H0C1 365 aa31.1■■■□□ 2.57
SMARCD2-210ENST00000584400 CDKL5O76039 1030 aa31.09■■■□□ 2.57
SMARCD2-210ENST00000584400 SP2Q02086 613 aa31.09■■■□□ 2.57
SMARCD2-210ENST00000584400 PKN1Q16512 942 aa31.09■■■□□ 2.57
SMARCD2-210ENST00000584400 NBPF20Q3BBV1 942 aa31.09■■■□□ 2.57
SMARCD2-210ENST00000584400 FAM47CQ5HY64 1035 aa31.09■■■□□ 2.57
SMARCD2-210ENST00000584400 METTL7BQ6UX53 244 aa31.09■■■□□ 2.57
SMARCD2-210ENST00000584400 BICD2Q8TD16 824 aa31.09■■■□□ 2.57
SMARCD2-210ENST00000584400 SLKQ9H2G2 1235 aaPredicted RBP31.09■■■□□ 2.57
SMARCD2-210ENST00000584400 NOP56O00567 594 aaKnown RBP31.08■■■□□ 2.57
SMARCD2-210ENST00000584400 STK3Q13188 491 aa31.08■■■□□ 2.57
SMARCD2-210ENST00000584400 LARP6Q9BRS8 491 aaKnown RBP31.08■■■□□ 2.57
SMARCD2-210ENST00000584400 ANO3Q9BYT9 981 aa31.08■■■□□ 2.57
SMARCD2-210ENST00000584400 KIAA1217Q5T5P2 1943 aa31.08■■■□□ 2.57
SMARCD2-210ENST00000584400 B4GALT4O60513 344 aa31.07■■■□□ 2.56
SMARCD2-210ENST00000584400 SEC24BO95487 1268 aa31.07■■■□□ 2.56
SMARCD2-210ENST00000584400 MTMR1Q13613 665 aa31.07■■■□□ 2.56
SMARCD2-210ENST00000584400 SH3GLB2Q9NR46 395 aa31.07■■■□□ 2.56
SMARCD2-210ENST00000584400 UBIAD1Q9Y5Z9 338 aa31.07■■■□□ 2.56
SMARCD2-210ENST00000584400 CEP290O15078 2479 aa31.07■■■□□ 2.56
SMARCD2-210ENST00000584400 DEXIO95424 95 aa31.06■■■□□ 2.56
SMARCD2-210ENST00000584400 HOXD8P13378 290 aaPredicted RBP31.06■■■□□ 2.56
SMARCD2-210ENST00000584400 CLK2P49760 499 aaKnown RBP31.06■■■□□ 2.56
SMARCD2-210ENST00000584400 FPGSQ05932 587 aa31.06■■■□□ 2.56
SMARCD2-210ENST00000584400 HSDL1Q3SXM5 330 aa31.06■■■□□ 2.56
SMARCD2-210ENST00000584400 MFSD5Q6N075 450 aa31.06■■■□□ 2.56
SMARCD2-210ENST00000584400 TMEM199Q8N511 208 aa31.06■■■□□ 2.56
SMARCD2-210ENST00000584400 TRPV6Q9H1D0 765 aa31.06■■■□□ 2.56
SMARCD2-210ENST00000584400 JADE2Q9NQC1 790 aa31.06■■■□□ 2.56
SMARCD2-210ENST00000584400 ITGB8P26012 769 aa31.05■■■□□ 2.56
SMARCD2-210ENST00000584400 FXR1P51114 621 aaKnown RBP eCLIP31.05■■■□□ 2.56
SMARCD2-210ENST00000584400 CHMP4BP1P59074 171 aa31.05■■■□□ 2.56
SMARCD2-210ENST00000584400 CYFIP1Q7L576 1253 aa31.05■■■□□ 2.56
SMARCD2-210ENST00000584400 REXO1Q8N1G1 1221 aaKnown RBP31.05■■■□□ 2.56
SMARCD2-210ENST00000584400 HIPK3Q9H422 1215 aa31.05■■■□□ 2.56
SMARCD2-210ENST00000584400 SORBS3O60504 671 aa31.04■■■□□ 2.56
SMARCD2-210ENST00000584400 F2P00734 622 aa31.04■■■□□ 2.56
SMARCD2-210ENST00000584400 ITGB5P18084 799 aa31.04■■■□□ 2.56
SMARCD2-210ENST00000584400 SREBF1P36956 1147 aa31.04■■■□□ 2.56
SMARCD2-210ENST00000584400 AK2P54819 239 aa31.04■■■□□ 2.56
SMARCD2-210ENST00000584400 SEMA3FQ13275 785 aa31.04■■■□□ 2.56
SMARCD2-210ENST00000584400 SESTD1Q86VW0 696 aa31.04■■■□□ 2.56
SMARCD2-210ENST00000584400 FAM177A1Q8N128 213 aaPredicted RBP31.04■■■□□ 2.56
SMARCD2-210ENST00000584400 TPCN1Q9ULQ1 816 aa31.04■■■□□ 2.56
SMARCD2-210ENST00000584400 NOD1Q9Y239 953 aa31.04■■■□□ 2.56
SMARCD2-210ENST00000584400 PFKFB2O60825 505 aa31.03■■■□□ 2.56
SMARCD2-210ENST00000584400 NEK4P51957 841 aa31.03■■■□□ 2.56
SMARCD2-210ENST00000584400 LRIT3Q3SXY7 679 aa31.03■■■□□ 2.56
SMARCD2-210ENST00000584400 C8orf34Q49A92 452 aa31.03■■■□□ 2.56
SMARCD2-210ENST00000584400 JAKMIP3Q5VZ66 844 aa31.03■■■□□ 2.56
SMARCD2-210ENST00000584400 C7orf31Q8N865 590 aa31.03■■■□□ 2.56
SMARCD2-210ENST00000584400 KAT2BQ92831 832 aa31.03■■■□□ 2.56
SMARCD2-210ENST00000584400 MXRA8Q9BRK3 442 aa31.03■■■□□ 2.56
SMARCD2-210ENST00000584400 PPP1R12CQ9BZL4 782 aa31.03■■■□□ 2.56
SMARCD2-210ENST00000584400 TMEM260Q9NX78 707 aa31.03■■■□□ 2.56
SMARCD2-210ENST00000584400 PCDH10Q9P2E7 1040 aa31.03■■■□□ 2.56
SMARCD2-210ENST00000584400 PPFIA3O75145 1194 aa31.02■■■□□ 2.56
SMARCD2-210ENST00000584400 ZNF76P36508 570 aa31.02■■■□□ 2.56
SMARCD2-210ENST00000584400 PSEN2P49810 448 aa31.02■■■□□ 2.56
SMARCD2-210ENST00000584400 PPIGQ13427 754 aaKnown RBP eCLIP31.02■■■□□ 2.563e-7■■■■□ 20.7
SMARCD2-210ENST00000584400 MFSD10Q14728 455 aa31.02■■■□□ 2.56
SMARCD2-210ENST00000584400 PGBD1Q96JS3 809 aa31.02■■■□□ 2.56
SMARCD2-210ENST00000584400 TRMT13Q9NUP7 481 aaKnown RBP31.02■■■□□ 2.56
SMARCD2-210ENST00000584400 ZNF286BP0CG31 522 aa31.01■■■□□ 2.55
SMARCD2-210ENST00000584400 NLRP5P59047 1200 aa31.01■■■□□ 2.55
SMARCD2-210ENST00000584400 SCRN1Q12765 414 aa31.01■■■□□ 2.55
SMARCD2-210ENST00000584400 CEP55Q53EZ4 464 aa31.01■■■□□ 2.55
SMARCD2-210ENST00000584400 VPS54Q9P1Q0 977 aa31.01■■■□□ 2.55
SMARCD2-210ENST00000584400 ARHGAP4P98171 946 aa31■■■□□ 2.55
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms