RNA–Protein interactions for RNA: ENST00000583988.1

PPP4R1-227, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-227ENST00000583988 TMX1Q9H3N1 280 aa5.86□□□□□ -1.47
PPP4R1-227ENST00000583988 GPR27Q9NS67 375 aa5.86□□□□□ -1.47
PPP4R1-227ENST00000583988 PRRG2O14669 202 aa5.85□□□□□ -1.47
PPP4R1-227ENST00000583988 PLA2G1BP04054 148 aaKnown RBP5.85□□□□□ -1.47
PPP4R1-227ENST00000583988 LCP1P13796 627 aa5.85□□□□□ -1.47
PPP4R1-227ENST00000583988 HSD3B2P26439 372 aa5.85□□□□□ -1.47
PPP4R1-227ENST00000583988 GTF2A2P52657 109 aa5.85□□□□□ -1.47
PPP4R1-227ENST00000583988 SUMO1P63165 101 aaKnown RBP5.85□□□□□ -1.47
PPP4R1-227ENST00000583988 HOMER1Q86YM7 354 aa5.85□□□□□ -1.47
PPP4R1-227ENST00000583988 TEX2Q8IWB9 1127 aa5.85□□□□□ -1.47
PPP4R1-227ENST00000583988 TP53I13Q8NBR0 393 aaPredicted RBP5.85□□□□□ -1.47
PPP4R1-227ENST00000583988 PLEKHO2Q8TD55 490 aa5.85□□□□□ -1.47
PPP4R1-227ENST00000583988 FNIP1Q8TF40 1166 aa5.85□□□□□ -1.47
PPP4R1-227ENST00000583988 TSPAN17Q96FV3 270 aa5.85□□□□□ -1.47
PPP4R1-227ENST00000583988 EXOC2Q96KP1 924 aa5.85□□□□□ -1.47
PPP4R1-227ENST00000583988 NCANO14594 1321 aa5.84□□□□□ -1.47
PPP4R1-227ENST00000583988 A0A1B0GTL3 188 aa5.84□□□□□ -1.47
PPP4R1-227ENST00000583988 CLSTN1O94985 981 aa5.84□□□□□ -1.47
PPP4R1-227ENST00000583988 BUD31P41223 144 aaPredicted RBP5.84□□□□□ -1.47
PPP4R1-227ENST00000583988 RPL11P62913 178 aaKnown RBP5.84□□□□□ -1.47
PPP4R1-227ENST00000583988 SLC9A5Q14940 896 aa5.84□□□□□ -1.47
PPP4R1-227ENST00000583988 SDE2Q6IQ49 451 aa5.84□□□□□ -1.47
PPP4R1-227ENST00000583988 STYK1Q6J9G0 422 aa5.84□□□□□ -1.47
PPP4R1-227ENST00000583988 USP53Q70EK8 1073 aa5.84□□□□□ -1.47
PPP4R1-227ENST00000583988 JAZF1Q86VZ6 243 aa5.84□□□□□ -1.47
PPP4R1-227ENST00000583988 SMARCC2Q8TAQ2 1214 aa5.84□□□□□ -1.47
PPP4R1-227ENST00000583988 ZFYVE21Q9BQ24 234 aa5.84□□□□□ -1.47
PPP4R1-227ENST00000583988 KRTAP4-9Q9BYQ8 210 aa5.84□□□□□ -1.47
PPP4R1-227ENST00000583988 LUC7LQ9NQ29 371 aaKnown RBP5.84□□□□□ -1.47
PPP4R1-227ENST00000583988 MRPS23Q9Y3D9 190 aaKnown RBP5.84□□□□□ -1.47
PPP4R1-227ENST00000583988 PCDHA2Q9Y5H9 948 aa5.84□□□□□ -1.47
PPP4R1-227ENST00000583988 PTCH2Q9Y6C5 1203 aa5.84□□□□□ -1.47
PPP4R1-227ENST00000583988 BLACEA4D250 179 aa5.83□□□□□ -1.48
PPP4R1-227ENST00000583988 C22orf46C9J442 243 aa5.83□□□□□ -1.48
PPP4R1-227ENST00000583988 FOXD2O60548 495 aaPredicted RBP5.83□□□□□ -1.48
PPP4R1-227ENST00000583988 ZBTB7AO95365 584 aa5.83□□□□□ -1.48
PPP4R1-227ENST00000583988 NAT1P18440 290 aa5.83□□□□□ -1.48
PPP4R1-227ENST00000583988 TCEA2Q15560 299 aa5.83□□□□□ -1.48
PPP4R1-227ENST00000583988 VWA3BQ502W6 1294 aa5.83□□□□□ -1.48
PPP4R1-227ENST00000583988 KCNT2Q6UVM3 1135 aa5.83□□□□□ -1.48
PPP4R1-227ENST00000583988 C16orf86Q6ZW13 317 aa5.83□□□□□ -1.48
PPP4R1-227ENST00000583988 CEP68Q76N32 757 aa5.83□□□□□ -1.48
PPP4R1-227ENST00000583988 B3GNT8Q7Z7M8 397 aa5.83□□□□□ -1.48
PPP4R1-227ENST00000583988 ZNF526Q8TF50 670 aaPredicted RBP5.83□□□□□ -1.48
PPP4R1-227ENST00000583988 PTPRN2Q92932 1015 aa5.83□□□□□ -1.48
PPP4R1-227ENST00000583988 PHF20Q9BVI0 1012 aa5.83□□□□□ -1.48
PPP4R1-227ENST00000583988 ADAM7Q9H2U9 754 aa5.83□□□□□ -1.48
PPP4R1-227ENST00000583988 CDIP1Q9H305 208 aa5.83□□□□□ -1.48
PPP4R1-227ENST00000583988 RTEL1Q9NZ71 1219 aa5.83□□□□□ -1.48
PPP4R1-227ENST00000583988 MRPL42Q9Y6G3 142 aaKnown RBP5.83□□□□□ -1.48
PPP4R1-227ENST00000583988 PLD2O14939 933 aa5.82□□□□□ -1.48
PPP4R1-227ENST00000583988 KCNQ2O43526 872 aa5.82□□□□□ -1.48
PPP4R1-227ENST00000583988 MYO1BO43795 1136 aa5.82□□□□□ -1.48
PPP4R1-227ENST00000583988 MSCO60682 206 aa5.82□□□□□ -1.48
PPP4R1-227ENST00000583988 EFCAB14O75071 495 aa5.82□□□□□ -1.48
PPP4R1-227ENST00000583988 RFPL3O75679 317 aa5.82□□□□□ -1.48
PPP4R1-227ENST00000583988 C6orf222P0C671 652 aaPredicted RBP5.82□□□□□ -1.48
PPP4R1-227ENST00000583988 FPR2P25090 351 aa5.82□□□□□ -1.48
PPP4R1-227ENST00000583988 BCL6P41182 706 aa5.82□□□□□ -1.48
PPP4R1-227ENST00000583988 KCNC1P48547 511 aa5.82□□□□□ -1.48
PPP4R1-227ENST00000583988 SLURP1P55000 103 aa5.82□□□□□ -1.48
PPP4R1-227ENST00000583988 GABREP78334 506 aa5.82□□□□□ -1.48
PPP4R1-227ENST00000583988 LSAMPQ13449 338 aa5.82□□□□□ -1.48
PPP4R1-227ENST00000583988 SQSTM1Q13501 440 aa5.82□□□□□ -1.48
PPP4R1-227ENST00000583988 FNDC3BQ53EP0 1204 aaKnown RBP5.82□□□□□ -1.48
PPP4R1-227ENST00000583988 PLEKHG4Q58EX7 1191 aa5.82□□□□□ -1.48
PPP4R1-227ENST00000583988 MAMDC2Q7Z304 686 aaPredicted RBP5.82□□□□□ -1.48
PPP4R1-227ENST00000583988 DCP2Q8IU60 420 aaKnown RBP5.82□□□□□ -1.48
PPP4R1-227ENST00000583988 Q8N1Y9 231 aa5.82□□□□□ -1.48
PPP4R1-227ENST00000583988 DDX11Q96FC9 970 aa5.82□□□□□ -1.48
PPP4R1-227ENST00000583988 TMEM169Q96HH4 297 aa5.82□□□□□ -1.48
PPP4R1-227ENST00000583988 MRPL4Q9BYD3 311 aaKnown RBP5.82□□□□□ -1.48
PPP4R1-227ENST00000583988 AP5M1Q9H0R1 490 aa5.82□□□□□ -1.48
PPP4R1-227ENST00000583988 KANSL2Q9H9L4 492 aa5.82□□□□□ -1.48
PPP4R1-227ENST00000583988 X6R8D5 127 aa5.82□□□□□ -1.48
PPP4R1-227ENST00000583988 H7BY64 318 aa5.81□□□□□ -1.48
PPP4R1-227ENST00000583988 GPR85P60893 370 aa5.81□□□□□ -1.48
PPP4R1-227ENST00000583988 HTRA3P83110 453 aa5.81□□□□□ -1.48
PPP4R1-227ENST00000583988 CACNB2Q08289 660 aaPredicted RBP5.81□□□□□ -1.48
PPP4R1-227ENST00000583988 TRIM61Q5EBN2 209 aa5.81□□□□□ -1.48
PPP4R1-227ENST00000583988 TAF7LQ5H9L4 462 aa5.81□□□□□ -1.48
PPP4R1-227ENST00000583988 LBX2Q6XYB7 198 aa5.81□□□□□ -1.48
PPP4R1-227ENST00000583988 SAPCD2Q86UD0 394 aa5.81□□□□□ -1.48
PPP4R1-227ENST00000583988 RIOX2Q8IUF8 465 aa5.81□□□□□ -1.48
PPP4R1-227ENST00000583988 IFNL3Q8IZI9 196 aa5.81□□□□□ -1.48
PPP4R1-227ENST00000583988 TRMT2BQ96GJ1 504 aaKnown RBP5.81□□□□□ -1.48
PPP4R1-227ENST00000583988 NOX5Q96PH1 765 aa5.81□□□□□ -1.48
PPP4R1-227ENST00000583988 SPATA25Q9BR10 227 aa5.81□□□□□ -1.48
PPP4R1-227ENST00000583988 FBXL7Q9UJT9 491 aa5.81□□□□□ -1.48
PPP4R1-227ENST00000583988 ADAMTS20P59510 1910 aa5.81□□□□□ -1.48
PPP4R1-227ENST00000583988 ASXL2Q76L83 1435 aa5.81□□□□□ -1.48
PPP4R1-227ENST00000583988 ESYT3A0FGR9 886 aa5.8□□□□□ -1.48
PPP4R1-227ENST00000583988 AQP7O14520 342 aa5.8□□□□□ -1.48
PPP4R1-227ENST00000583988 CDC45O75419 566 aa5.8□□□□□ -1.48
PPP4R1-227ENST00000583988 SYN1P17600 705 aa5.8□□□□□ -1.48
PPP4R1-227ENST00000583988 CAP1Q01518 475 aa5.8□□□□□ -1.48
PPP4R1-227ENST00000583988 SMAD4Q13485 552 aaKnown RBP5.8□□□□□ -1.48
PPP4R1-227ENST00000583988 MROH9Q5TGP6 573 aa5.8□□□□□ -1.48
PPP4R1-227ENST00000583988 LIPIQ6XZB0 460 aa5.8□□□□□ -1.48
PPP4R1-227ENST00000583988 KIAA0907Q7Z7F0 614 aaPredicted RBP5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms