RNA–Protein interactions for RNA: ENST00000583344.1

SMCHD1-208, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 738 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-208ENST00000583344 PUM1Q14671 1186 aaKnown RBP eCLIP6.7□□□□□ -1.34
SMCHD1-208ENST00000583344 FXNQ16595 210 aa6.7□□□□□ -1.34
SMCHD1-208ENST00000583344 SLC10A6Q3KNW5 377 aa6.7□□□□□ -1.34
SMCHD1-208ENST00000583344 TBC1D10BQ4KMP7 808 aaPredicted RBP6.7□□□□□ -1.34
SMCHD1-208ENST00000583344 FAM26FQ5R3K3 315 aa6.7□□□□□ -1.34
SMCHD1-208ENST00000583344 GPR20Q99678 358 aa6.7□□□□□ -1.34
SMCHD1-208ENST00000583344 ZNF408Q9H9D4 720 aa6.7□□□□□ -1.34
SMCHD1-208ENST00000583344 SMPD4Q9NXE4 827 aa6.7□□□□□ -1.34
SMCHD1-208ENST00000583344 CLDND1Q9NY35 253 aa6.7□□□□□ -1.34
SMCHD1-208ENST00000583344 PCDHB4Q9Y5E5 795 aa6.7□□□□□ -1.34
SMCHD1-208ENST00000583344 TCRBV5S2A0A599 114 aa6.69□□□□□ -1.34
SMCHD1-208ENST00000583344 MROH6A6NGR9 719 aa6.69□□□□□ -1.34
SMCHD1-208ENST00000583344 HGSO14964 777 aaPredicted RBP6.69□□□□□ -1.34
SMCHD1-208ENST00000583344 PLATP00750 562 aa6.69□□□□□ -1.34
SMCHD1-208ENST00000583344 FGRP09769 529 aa6.69□□□□□ -1.34
SMCHD1-208ENST00000583344 NKX3-2P78367 333 aa6.69□□□□□ -1.34
SMCHD1-208ENST00000583344 ADAM17P78536 824 aa6.69□□□□□ -1.34
SMCHD1-208ENST00000583344 LSAMPQ13449 338 aa6.69□□□□□ -1.34
SMCHD1-208ENST00000583344 STEAP3Q658P3 488 aa6.69□□□□□ -1.34
SMCHD1-208ENST00000583344 CCDC140Q96MF4 163 aa6.69□□□□□ -1.34
SMCHD1-208ENST00000583344 DTLQ9NZJ0 730 aa6.69□□□□□ -1.34
SMCHD1-208ENST00000583344 H7BY64 318 aa6.68□□□□□ -1.34
SMCHD1-208ENST00000583344 CAPNS1P04632 268 aa6.68□□□□□ -1.34
SMCHD1-208ENST00000583344 ZNF28P17035 718 aa6.68□□□□□ -1.34
SMCHD1-208ENST00000583344 KIAA2012Q0VF49 1180 aa6.68□□□□□ -1.34
SMCHD1-208ENST00000583344 SLC35F1Q5T1Q4 408 aa6.68□□□□□ -1.34
SMCHD1-208ENST00000583344 PRAMEF18Q5VWM3 479 aa6.68□□□□□ -1.34
SMCHD1-208ENST00000583344 LGI4Q8N135 537 aa6.68□□□□□ -1.34
SMCHD1-208ENST00000583344 LOXL4Q96JB6 756 aa6.68□□□□□ -1.34
SMCHD1-208ENST00000583344 TADA3O75528 432 aa6.67□□□□□ -1.34
SMCHD1-208ENST00000583344 PPP2R2AP63151 447 aa6.67□□□□□ -1.34
SMCHD1-208ENST00000583344 CHRNA2Q15822 529 aa6.67□□□□□ -1.34
SMCHD1-208ENST00000583344 EMC4Q5J8M3 183 aa6.67□□□□□ -1.34
SMCHD1-208ENST00000583344 BORAQ6PGQ7 559 aa6.67□□□□□ -1.34
SMCHD1-208ENST00000583344 TEPPQ6URK8 271 aa6.67□□□□□ -1.34
SMCHD1-208ENST00000583344 EEPD1Q7L9B9 569 aa6.67□□□□□ -1.34
SMCHD1-208ENST00000583344 CELF2-AS1Q8N7Q2 184 aa6.67□□□□□ -1.34
SMCHD1-208ENST00000583344 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.67□□□□□ -1.34
SMCHD1-208ENST00000583344 HNRNPLLQ8WVV9 542 aaKnown RBP6.67□□□□□ -1.34
SMCHD1-208ENST00000583344 TOE1Q96GM8 510 aaKnown RBP6.67□□□□□ -1.34
SMCHD1-208ENST00000583344 C8orf49Q96NF6 230 aa6.67□□□□□ -1.34
SMCHD1-208ENST00000583344 TINF2Q9BSI4 451 aa6.67□□□□□ -1.34
SMCHD1-208ENST00000583344 KRTAP3-1Q9BYR8 98 aa6.67□□□□□ -1.34
SMCHD1-208ENST00000583344 NGRNQ9NPE2 291 aaKnown RBP6.67□□□□□ -1.34
SMCHD1-208ENST00000583344 WASF3Q9UPY6 502 aa6.67□□□□□ -1.34
SMCHD1-208ENST00000583344 MSCO60682 206 aa6.66□□□□□ -1.34
SMCHD1-208ENST00000583344 LRG1P02750 347 aa6.66□□□□□ -1.34
SMCHD1-208ENST00000583344 TCF3P15923 654 aa6.66□□□□□ -1.34
SMCHD1-208ENST00000583344 GNL2Q13823 731 aaKnown RBP6.66□□□□□ -1.34
SMCHD1-208ENST00000583344 LIMS2Q7Z4I7 341 aa6.66□□□□□ -1.34
SMCHD1-208ENST00000583344 FAM124AQ86V42 546 aa6.66□□□□□ -1.34
SMCHD1-208ENST00000583344 MCF2L2Q86YR7 1114 aa6.66□□□□□ -1.34
SMCHD1-208ENST00000583344 LCORQ96JN0 433 aaPredicted RBP6.66□□□□□ -1.34
SMCHD1-208ENST00000583344 CDIP1Q9H305 208 aa6.66□□□□□ -1.34
SMCHD1-208ENST00000583344 EPB41L1Q9H4G0 881 aa6.66□□□□□ -1.34
SMCHD1-208ENST00000583344 ST7Q9NRC1 585 aa6.66□□□□□ -1.34
SMCHD1-208ENST00000583344 MYOTQ9UBF9 498 aa6.66□□□□□ -1.34
SMCHD1-208ENST00000583344 RBPJLQ9UBG7 517 aa6.66□□□□□ -1.34
SMCHD1-208ENST00000583344 PPARGC1AQ9UBK2 798 aaKnown RBP6.66□□□□□ -1.34
SMCHD1-208ENST00000583344 NPFFR2Q9Y5X5 522 aa6.66□□□□□ -1.34
SMCHD1-208ENST00000583344 ZNF536O15090 1300 aa6.66□□□□□ -1.34
SMCHD1-208ENST00000583344 A0A1W2PQU0 124 aa6.65□□□□□ -1.34
SMCHD1-208ENST00000583344 B4GALT3O60512 393 aa6.65□□□□□ -1.34
SMCHD1-208ENST00000583344 DGKIO75912 1065 aa6.65□□□□□ -1.34
SMCHD1-208ENST00000583344 CYP1A1P04798 512 aaPredicted RBP6.65□□□□□ -1.34
SMCHD1-208ENST00000583344 MLLT6P55198 1093 aaPredicted RBP6.65□□□□□ -1.34
SMCHD1-208ENST00000583344 TMC5Q6UXY8 1006 aa6.65□□□□□ -1.34
SMCHD1-208ENST00000583344 CLIC6Q96NY7 704 aa6.65□□□□□ -1.34
SMCHD1-208ENST00000583344 IER2Q9BTL4 223 aa6.65□□□□□ -1.34
SMCHD1-208ENST00000583344 JAM3Q9BX67 310 aa6.65□□□□□ -1.34
SMCHD1-208ENST00000583344 TMPRSS5Q9H3S3 457 aa6.65□□□□□ -1.34
SMCHD1-208ENST00000583344 CROTQ9UKG9 612 aa6.65□□□□□ -1.34
SMCHD1-208ENST00000583344 MYRFQ9Y2G1 1151 aa6.65□□□□□ -1.34
SMCHD1-208ENST00000583344 AGRPO00253 132 aa6.64□□□□□ -1.35
SMCHD1-208ENST00000583344 DLX3O60479 287 aa6.64□□□□□ -1.35
SMCHD1-208ENST00000583344 DNAJA1P31689 397 aaKnown RBP6.64□□□□□ -1.35
SMCHD1-208ENST00000583344 IL13P35225 146 aa6.64□□□□□ -1.35
SMCHD1-208ENST00000583344 ARID5AQ03989 594 aa6.64□□□□□ -1.35
SMCHD1-208ENST00000583344 MAP4K2Q12851 820 aa6.64□□□□□ -1.35
SMCHD1-208ENST00000583344 USP53Q70EK8 1073 aa6.64□□□□□ -1.35
SMCHD1-208ENST00000583344 PIP4K2CQ8TBX8 421 aa6.64□□□□□ -1.35
SMCHD1-208ENST00000583344 ZCCHC14Q8WYQ9 949 aaKnown RBP6.64□□□□□ -1.35
SMCHD1-208ENST00000583344 KCTD13Q8WZ19 329 aa6.64□□□□□ -1.35
SMCHD1-208ENST00000583344 YTHDC1Q96MU7 727 aaKnown RBP6.64□□□□□ -1.35
SMCHD1-208ENST00000583344 SAMD11Q96NU1 681 aa6.64□□□□□ -1.35
SMCHD1-208ENST00000583344 SSBP3Q9BWW4 388 aaPredicted RBP6.64□□□□□ -1.35
SMCHD1-208ENST00000583344 EPN3Q9H201 632 aa6.64□□□□□ -1.35
SMCHD1-208ENST00000583344 L2HGDHQ9H9P8 463 aa6.64□□□□□ -1.35
SMCHD1-208ENST00000583344 C9orf118A6NHY6 69 aa6.63□□□□□ -1.35
SMCHD1-208ENST00000583344 ZNF20P17024 532 aa6.63□□□□□ -1.35
SMCHD1-208ENST00000583344 PHF19Q5T6S3 580 aa6.63□□□□□ -1.35
SMCHD1-208ENST00000583344 MBD6Q96DN6 1003 aa6.63□□□□□ -1.35
SMCHD1-208ENST00000583344 PHF20Q9BVI0 1012 aa6.63□□□□□ -1.35
SMCHD1-208ENST00000583344 ASH2LQ9UBL3 628 aa6.63□□□□□ -1.35
SMCHD1-208ENST00000583344 ST6GALNAC2Q9UJ37 374 aa6.63□□□□□ -1.35
SMCHD1-208ENST00000583344 SLC27A2O14975 620 aa6.62□□□□□ -1.35
SMCHD1-208ENST00000583344 TNFRSF1AP19438 455 aa6.62□□□□□ -1.35
SMCHD1-208ENST00000583344 GRIN1Q05586 938 aa6.62□□□□□ -1.35
SMCHD1-208ENST00000583344 CPZQ66K79 652 aa6.62□□□□□ -1.35
SMCHD1-208ENST00000583344 RBM12BQ8IXT5 1001 aaKnown RBP6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms