RNA–Protein interactions for RNA: ENST00000582370.1

PDLIM1P3-201, Transcript of PDZ and LIM domain 1 pseudogene 3, humanhuman

BASIC

Gene PDLIM1P3, Length 599 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P3-201ENST00000582370 SLC4A3P48751 1232 aa10.11□□□□□ -0.79
PDLIM1P3-201ENST00000582370 GNAQP50148 359 aa10.11□□□□□ -0.79
PDLIM1P3-201ENST00000582370 PURAQ00577 322 aaKnown RBP10.11□□□□□ -0.79
PDLIM1P3-201ENST00000582370 TCF15Q12870 199 aa10.11□□□□□ -0.79
PDLIM1P3-201ENST00000582370 PTPROQ16827 1216 aa10.11□□□□□ -0.79
PDLIM1P3-201ENST00000582370 ADCK5Q3MIX3 580 aa10.11□□□□□ -0.79
PDLIM1P3-201ENST00000582370 STOX1Q6ZVD7 989 aa10.11□□□□□ -0.79
PDLIM1P3-201ENST00000582370 ERMP1Q7Z2K6 904 aa10.11□□□□□ -0.79
PDLIM1P3-201ENST00000582370 RGS22Q8NE09 1264 aa10.11□□□□□ -0.79
PDLIM1P3-201ENST00000582370 MRPL38Q96DV4 380 aaKnown RBP10.11□□□□□ -0.79
PDLIM1P3-201ENST00000582370 RAD9AQ99638 391 aa10.11□□□□□ -0.79
PDLIM1P3-201ENST00000582370 LZTS2Q9BRK4 669 aa10.11□□□□□ -0.79
PDLIM1P3-201ENST00000582370 IRF2BPLQ9H1B7 796 aa10.11□□□□□ -0.79
PDLIM1P3-201ENST00000582370 ACAD9Q9H845 621 aa10.11□□□□□ -0.79
PDLIM1P3-201ENST00000582370 KAT14Q9H8E8 782 aa10.11□□□□□ -0.79
PDLIM1P3-201ENST00000582370 RAVER2Q9HCJ3 691 aaKnown RBP10.11□□□□□ -0.79
PDLIM1P3-201ENST00000582370 RBM28Q9NW13 759 aaKnown RBP10.11□□□□□ -0.79
PDLIM1P3-201ENST00000582370 KIF3AQ9Y496 699 aa10.11□□□□□ -0.79
PDLIM1P3-201ENST00000582370 CYP2D7A0A087X1C5 515 aa10.1□□□□□ -0.79
PDLIM1P3-201ENST00000582370 SH2B2O14492 632 aaPredicted RBP10.1□□□□□ -0.79
PDLIM1P3-201ENST00000582370 EFCAB14O75071 495 aa10.1□□□□□ -0.79
PDLIM1P3-201ENST00000582370 PARNO95453 639 aaKnown RBP10.1□□□□□ -0.79
PDLIM1P3-201ENST00000582370 SMARCA1P28370 1054 aa10.1□□□□□ -0.79
PDLIM1P3-201ENST00000582370 CPT1AP50416 773 aa10.1□□□□□ -0.79
PDLIM1P3-201ENST00000582370 DEFB103AP81534 67 aa10.1□□□□□ -0.79
PDLIM1P3-201ENST00000582370 CNTN2Q02246 1040 aa10.1□□□□□ -0.79
PDLIM1P3-201ENST00000582370 PTPN11Q06124 597 aaPredicted RBP10.1□□□□□ -0.79
PDLIM1P3-201ENST00000582370 TRAF1Q13077 416 aa10.1□□□□□ -0.79
PDLIM1P3-201ENST00000582370 COL19A1Q14993 1142 aa10.1□□□□□ -0.79
PDLIM1P3-201ENST00000582370 FAM47CQ5HY64 1035 aa10.1□□□□□ -0.79
PDLIM1P3-201ENST00000582370 TAPT1Q6NXT6 567 aa10.1□□□□□ -0.79
PDLIM1P3-201ENST00000582370 NFRKBQ6P4R8 1299 aa10.1□□□□□ -0.79
PDLIM1P3-201ENST00000582370 CNKSR3Q6P9H4 555 aa10.1□□□□□ -0.79
PDLIM1P3-201ENST00000582370 NFXL1Q6ZNB6 911 aa10.1□□□□□ -0.79
PDLIM1P3-201ENST00000582370 Q6ZUG5 572 aa10.1□□□□□ -0.79
PDLIM1P3-201ENST00000582370 SUGP1Q8IWZ8 645 aaKnown RBP10.1□□□□□ -0.79
PDLIM1P3-201ENST00000582370 FAM177A1Q8N128 213 aaPredicted RBP10.1□□□□□ -0.79
PDLIM1P3-201ENST00000582370 CCDC155Q8N6L0 562 aa10.1□□□□□ -0.79
PDLIM1P3-201ENST00000582370 GMCL1P1Q8NEA9 526 aa10.1□□□□□ -0.79
PDLIM1P3-201ENST00000582370 FBXO22Q8NEZ5 403 aa10.1□□□□□ -0.79
PDLIM1P3-201ENST00000582370 CAGE1Q8TC20 777 aa10.1□□□□□ -0.79
PDLIM1P3-201ENST00000582370 IGDCC4Q8TDY8 1250 aa10.1□□□□□ -0.79
PDLIM1P3-201ENST00000582370 AFAP1L1Q8TED9 768 aa10.1□□□□□ -0.79
PDLIM1P3-201ENST00000582370 EDAQ92838 391 aa10.1□□□□□ -0.79
PDLIM1P3-201ENST00000582370 NUP88Q99567 741 aaPredicted RBP10.1□□□□□ -0.79
PDLIM1P3-201ENST00000582370 LLPHQ9BRT6 129 aaKnown RBP10.1□□□□□ -0.79
PDLIM1P3-201ENST00000582370 MTG1Q9BT17 334 aaPredicted RBP10.1□□□□□ -0.79
PDLIM1P3-201ENST00000582370 VTA1Q9NP79 307 aa10.1□□□□□ -0.79
PDLIM1P3-201ENST00000582370 MTMR4Q9NYA4 1195 aa10.1□□□□□ -0.79
PDLIM1P3-201ENST00000582370 MUTYHQ9UIF7 546 aa10.1□□□□□ -0.79
PDLIM1P3-201ENST00000582370 PNMA2Q9UL42 364 aa10.1□□□□□ -0.79
PDLIM1P3-201ENST00000582370 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.1□□□□□ -0.79
PDLIM1P3-201ENST00000582370 NID2Q14112 1375 aa10.1□□□□□ -0.79
PDLIM1P3-201ENST00000582370 IGKV6D-41A0A0C4DH26 115 aa10.09□□□□□ -0.79
PDLIM1P3-201ENST00000582370 SOWAHBA6NEL2 793 aa10.09□□□□□ -0.79
PDLIM1P3-201ENST00000582370 F5H6K3 240 aa10.09□□□□□ -0.79
PDLIM1P3-201ENST00000582370 K7ELQ4 463 aaPredicted RBP10.09□□□□□ -0.79
PDLIM1P3-201ENST00000582370 ZBTB43O43298 467 aa10.09□□□□□ -0.79
PDLIM1P3-201ENST00000582370 PRDM1O75626 825 aa10.09□□□□□ -0.79
PDLIM1P3-201ENST00000582370 NDUFB10O96000 172 aa10.09□□□□□ -0.79
PDLIM1P3-201ENST00000582370 FDX1P10109 184 aa10.09□□□□□ -0.79
PDLIM1P3-201ENST00000582370 PTGS1P23219 599 aa10.09□□□□□ -0.79
PDLIM1P3-201ENST00000582370 KLRC3Q07444 240 aa10.09□□□□□ -0.79
PDLIM1P3-201ENST00000582370 SEC23AQ15436 765 aa10.09□□□□□ -0.79
PDLIM1P3-201ENST00000582370 DUSP28Q4G0W2 176 aa10.09□□□□□ -0.79
PDLIM1P3-201ENST00000582370 GPATCH4Q5T3I0 446 aaKnown RBP10.09□□□□□ -0.79
PDLIM1P3-201ENST00000582370 IER5LQ5T953 404 aa10.09□□□□□ -0.79
PDLIM1P3-201ENST00000582370 TEX2Q8IWB9 1127 aa10.09□□□□□ -0.79
PDLIM1P3-201ENST00000582370 FBXO16Q8IX29 292 aaPredicted RBP10.09□□□□□ -0.79
PDLIM1P3-201ENST00000582370 ENAHQ8N8S7 591 aaPredicted RBP10.09□□□□□ -0.79
PDLIM1P3-201ENST00000582370 CTCFLQ8NI51 663 aaPredicted RBP10.09□□□□□ -0.79
PDLIM1P3-201ENST00000582370 KIFC2Q96AC6 838 aa10.09□□□□□ -0.79
PDLIM1P3-201ENST00000582370 INTS4Q96HW7 963 aaKnown RBP10.09□□□□□ -0.79
PDLIM1P3-201ENST00000582370 SAMD11Q96NU1 681 aa10.09□□□□□ -0.79
PDLIM1P3-201ENST00000582370 LY9Q9HBG7 655 aa10.09□□□□□ -0.79
PDLIM1P3-201ENST00000582370 A1CFQ9NQ94 594 aaKnown RBP10.09□□□□□ -0.79
PDLIM1P3-201ENST00000582370 GPHNQ9NQX3 736 aaPredicted RBP10.09□□□□□ -0.79
PDLIM1P3-201ENST00000582370 PDGFCQ9NRA1 345 aa10.09□□□□□ -0.79
PDLIM1P3-201ENST00000582370 STX8Q9UNK0 236 aa10.09□□□□□ -0.79
PDLIM1P3-201ENST00000582370 NOD1Q9Y239 953 aa10.09□□□□□ -0.79
PDLIM1P3-201ENST00000582370 FAM186AA6NE01 2351 aa10.09□□□□□ -0.79
PDLIM1P3-201ENST00000582370 ABHD14A-ACY1A0A1B0GW23 586 aa10.08□□□□□ -0.8
PDLIM1P3-201ENST00000582370 HSP90AA1P07900 732 aaKnown RBP10.08□□□□□ -0.8
PDLIM1P3-201ENST00000582370 MYL3P08590 195 aa10.08□□□□□ -0.8
PDLIM1P3-201ENST00000582370 AK2P54819 239 aa10.08□□□□□ -0.8
PDLIM1P3-201ENST00000582370 SMAD2Q15796 467 aaKnown RBP10.08□□□□□ -0.8
PDLIM1P3-201ENST00000582370 NBPF20Q3BBV1 942 aa10.08□□□□□ -0.8
PDLIM1P3-201ENST00000582370 TKFCQ3LXA3 575 aa10.08□□□□□ -0.8
PDLIM1P3-201ENST00000582370 ASPRV1Q53RT3 343 aa10.08□□□□□ -0.8
PDLIM1P3-201ENST00000582370 BRDTQ58F21 947 aaPredicted RBP10.08□□□□□ -0.8
PDLIM1P3-201ENST00000582370 CYB5R4Q7L1T6 521 aa10.08□□□□□ -0.8
PDLIM1P3-201ENST00000582370 TMCO2Q7Z6W1 182 aaPredicted RBP10.08□□□□□ -0.8
PDLIM1P3-201ENST00000582370 BANK1Q8NDB2 785 aa10.08□□□□□ -0.8
PDLIM1P3-201ENST00000582370 DCAF4Q8WV16 495 aa10.08□□□□□ -0.8
PDLIM1P3-201ENST00000582370 BRF1Q92994 677 aa10.08□□□□□ -0.8
PDLIM1P3-201ENST00000582370 CEP95Q96GE4 821 aa10.08□□□□□ -0.8
PDLIM1P3-201ENST00000582370 SLKQ9H2G2 1235 aaPredicted RBP10.08□□□□□ -0.8
PDLIM1P3-201ENST00000582370 TSHZ2Q9NRE2 1034 aa10.08□□□□□ -0.8
PDLIM1P3-201ENST00000582370 HOMER2Q9NSB8 354 aa10.08□□□□□ -0.8
PDLIM1P3-201ENST00000582370 FEM1BQ9UK73 627 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms