RNA–Protein interactions for RNA: ENST00000582288.1

TVP23B-210, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 3

Gene TVP23B, Length 336 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-210ENST00000582288 MBTPS2O43462 519 aa7.38□□□□□ -1.23
TVP23B-210ENST00000582288 RAB11FIP3O75154 756 aa7.38□□□□□ -1.23
TVP23B-210ENST00000582288 LGR5O75473 907 aa7.38□□□□□ -1.23
TVP23B-210ENST00000582288 RB1P06400 928 aa7.38□□□□□ -1.23
TVP23B-210ENST00000582288 TSPY3P0CV98 308 aa7.38□□□□□ -1.23
TVP23B-210ENST00000582288 TSPY8P0CW00 308 aa7.38□□□□□ -1.23
TVP23B-210ENST00000582288 CASTP20810 708 aaKnown RBP7.38□□□□□ -1.23
TVP23B-210ENST00000582288 NOVP48745 357 aa7.38□□□□□ -1.23
TVP23B-210ENST00000582288 PDE4BQ07343 736 aa7.38□□□□□ -1.23
TVP23B-210ENST00000582288 PDE4DQ08499 809 aa7.38□□□□□ -1.23
TVP23B-210ENST00000582288 IKQ13123 557 aaPredicted RBP7.38□□□□□ -1.23
TVP23B-210ENST00000582288 SMAD4Q13485 552 aaKnown RBP7.38□□□□□ -1.23
TVP23B-210ENST00000582288 GPM6BQ13491 265 aa7.38□□□□□ -1.23
TVP23B-210ENST00000582288 CCDC62Q6P9F0 684 aa7.38□□□□□ -1.23
TVP23B-210ENST00000582288 BTNL9Q6UXG8 535 aa7.38□□□□□ -1.23
TVP23B-210ENST00000582288 NSMFQ6X4W1 530 aa7.38□□□□□ -1.23
TVP23B-210ENST00000582288 FBXO11Q86XK2 927 aa7.38□□□□□ -1.23
TVP23B-210ENST00000582288 FBXL6Q8N531 539 aa7.38□□□□□ -1.23
TVP23B-210ENST00000582288 RGS22Q8NE09 1264 aa7.38□□□□□ -1.23
TVP23B-210ENST00000582288 DHX38Q92620 1227 aaKnown RBP7.38□□□□□ -1.23
TVP23B-210ENST00000582288 TOP1MTQ969P6 601 aa7.38□□□□□ -1.23
TVP23B-210ENST00000582288 PBXIP1Q96AQ6 731 aa7.38□□□□□ -1.23
TVP23B-210ENST00000582288 KATNAL1Q9BW62 490 aa7.38□□□□□ -1.23
TVP23B-210ENST00000582288 RANBP17Q9H2T7 1088 aaKnown RBP7.38□□□□□ -1.23
TVP23B-210ENST00000582288 C1orf115Q9H7X2 142 aa7.38□□□□□ -1.23
TVP23B-210ENST00000582288 CLDND1Q9NY35 253 aa7.38□□□□□ -1.23
TVP23B-210ENST00000582288 MUTYHQ9UIF7 546 aa7.38□□□□□ -1.23
TVP23B-210ENST00000582288 DDX49Q9Y6V7 483 aaKnown RBP7.38□□□□□ -1.23
TVP23B-210ENST00000582288 V9GY48 417 aaPredicted RBP7.38□□□□□ -1.23
TVP23B-210ENST00000582288 MYO15AQ9UKN7 3530 aa7.38□□□□□ -1.23
TVP23B-210ENST00000582288 LCTP09848 1927 aa7.37□□□□□ -1.23
TVP23B-210ENST00000582288 EYA4O95677 639 aa7.37□□□□□ -1.23
TVP23B-210ENST00000582288 SLC3A2P08195 630 aaKnown RBP7.37□□□□□ -1.23
TVP23B-210ENST00000582288 TXNP10599 105 aaKnown RBP7.37□□□□□ -1.23
TVP23B-210ENST00000582288 MCCP23508 829 aa7.37□□□□□ -1.23
TVP23B-210ENST00000582288 CBX2Q14781 532 aaPredicted RBP7.37□□□□□ -1.23
TVP23B-210ENST00000582288 TRIM71Q2Q1W2 868 aaKnown RBP7.37□□□□□ -1.23
TVP23B-210ENST00000582288 SLFNL1Q499Z3 407 aa7.37□□□□□ -1.23
TVP23B-210ENST00000582288 PLEKHG4Q58EX7 1191 aa7.37□□□□□ -1.23
TVP23B-210ENST00000582288 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.37□□□□□ -1.231e-7■■■■□ 23.8
TVP23B-210ENST00000582288 RNF207Q6ZRF8 634 aa7.37□□□□□ -1.23
TVP23B-210ENST00000582288 TMEM192Q8IY95 271 aa7.37□□□□□ -1.23
TVP23B-210ENST00000582288 C7orf31Q8N865 590 aa7.37□□□□□ -1.23
TVP23B-210ENST00000582288 ANKS1AQ92625 1134 aa7.37□□□□□ -1.23
TVP23B-210ENST00000582288 KAT2BQ92831 832 aa7.37□□□□□ -1.23
TVP23B-210ENST00000582288 EMID1Q96A84 441 aaPredicted RBP7.37□□□□□ -1.23
TVP23B-210ENST00000582288 PURBQ96QR8 312 aaKnown RBP7.37□□□□□ -1.23
TVP23B-210ENST00000582288 BOLA2Q9H3K6 86 aa7.37□□□□□ -1.23
TVP23B-210ENST00000582288 ALG13Q9NP73 1137 aaKnown RBP7.37□□□□□ -1.23
TVP23B-210ENST00000582288 RWDD3Q9Y3V2 267 aa7.37□□□□□ -1.23
TVP23B-210ENST00000582288 DCHS1Q96JQ0 3298 aa7.37□□□□□ -1.23
TVP23B-210ENST00000582288 TET1Q8NFU7 2136 aa7.37□□□□□ -1.23
TVP23B-210ENST00000582288 RALGAPA2Q2PPJ7 1873 aa7.36□□□□□ -1.23
TVP23B-210ENST00000582288 WDR19Q8NEZ3 1342 aa7.36□□□□□ -1.23
TVP23B-210ENST00000582288 LOC730098B7Z3J9 87 aa7.36□□□□□ -1.23
TVP23B-210ENST00000582288 PATL2C9JE40 543 aaKnown RBP7.36□□□□□ -1.23
TVP23B-210ENST00000582288 STXBP3O00186 592 aa7.36□□□□□ -1.23
TVP23B-210ENST00000582288 HAS3O00219 553 aa7.36□□□□□ -1.23
TVP23B-210ENST00000582288 CAND2O75155 1236 aa7.36□□□□□ -1.23
TVP23B-210ENST00000582288 F2P00734 622 aa7.36□□□□□ -1.23
TVP23B-210ENST00000582288 GH1P01241 217 aa7.36□□□□□ -1.23
TVP23B-210ENST00000582288 ZFYP08048 801 aaPredicted RBP7.36□□□□□ -1.23
TVP23B-210ENST00000582288 MMP3P08254 477 aa7.36□□□□□ -1.23
TVP23B-210ENST00000582288 ZXDAP98168 799 aa7.36□□□□□ -1.23
TVP23B-210ENST00000582288 TFAP4Q01664 338 aa7.36□□□□□ -1.23
TVP23B-210ENST00000582288 ARHGAP1Q07960 439 aa7.36□□□□□ -1.23
TVP23B-210ENST00000582288 SIGLEC14Q08ET2 396 aa7.36□□□□□ -1.23
TVP23B-210ENST00000582288 MBTPS1Q14703 1052 aa7.36□□□□□ -1.23
TVP23B-210ENST00000582288 DGKDQ16760 1214 aa7.36□□□□□ -1.23
TVP23B-210ENST00000582288 TCTN1Q2MV58 587 aa7.36□□□□□ -1.23
TVP23B-210ENST00000582288 ZNF618Q5T7W0 954 aa7.36□□□□□ -1.23
TVP23B-210ENST00000582288 RPAINQ86UA6 219 aa7.36□□□□□ -1.23
TVP23B-210ENST00000582288 ITPRIPQ8IWB1 547 aa7.36□□□□□ -1.23
TVP23B-210ENST00000582288 FTSJ3Q8IY81 847 aaKnown RBP7.36□□□□□ -1.23
TVP23B-210ENST00000582288 DCAF4Q8WV16 495 aa7.36□□□□□ -1.23
TVP23B-210ENST00000582288 CLEC4DQ8WXI8 215 aa7.36□□□□□ -1.23
TVP23B-210ENST00000582288 APPBP2Q92624 585 aa7.36□□□□□ -1.23
TVP23B-210ENST00000582288 YME1L1Q96TA2 773 aa7.36□□□□□ -1.23
TVP23B-210ENST00000582288 C11orf84Q9BUA3 381 aaPredicted RBP7.36□□□□□ -1.23
TVP23B-210ENST00000582288 HDAC6Q9UBN7 1215 aa7.36□□□□□ -1.23
TVP23B-210ENST00000582288 MYH7P12883 1935 aa7.36□□□□□ -1.23
TVP23B-210ENST00000582288 KMT2EQ8IZD2 1858 aa7.35□□□□□ -1.23
TVP23B-210ENST00000582288 PTPDC1A2A3K4 754 aa7.35□□□□□ -1.23
TVP23B-210ENST00000582288 NFIBO00712 420 aa7.35□□□□□ -1.23
TVP23B-210ENST00000582288 HMMRO75330 724 aa7.35□□□□□ -1.23
TVP23B-210ENST00000582288 PPFIA4O75335 1185 aa7.35□□□□□ -1.23
TVP23B-210ENST00000582288 PRDM1O75626 825 aa7.35□□□□□ -1.23
TVP23B-210ENST00000582288 HOXD8P13378 290 aaPredicted RBP7.35□□□□□ -1.23
TVP23B-210ENST00000582288 TDO2P48775 406 aa7.35□□□□□ -1.23
TVP23B-210ENST00000582288 RPS6P62753 249 aaKnown RBP7.35□□□□□ -1.23
TVP23B-210ENST00000582288 HYAL1Q12794 435 aa7.35□□□□□ -1.23
TVP23B-210ENST00000582288 COASYQ13057 564 aa7.35□□□□□ -1.23
TVP23B-210ENST00000582288 FAM117BQ6P1L5 589 aa7.35□□□□□ -1.23
TVP23B-210ENST00000582288 EP400NLQ6ZTU2 488 aa7.35□□□□□ -1.23
TVP23B-210ENST00000582288 KCTD1Q719H9 257 aa7.35□□□□□ -1.23
TVP23B-210ENST00000582288 SERINC5Q86VE9 423 aa7.35□□□□□ -1.23
TVP23B-210ENST00000582288 MYOCDQ8IZQ8 938 aa7.35□□□□□ -1.23
TVP23B-210ENST00000582288 DBF4BQ8NFT6 615 aa7.35□□□□□ -1.23
TVP23B-210ENST00000582288 AFG1LQ8WV93 481 aa7.35□□□□□ -1.23
TVP23B-210ENST00000582288 SEPT8Q92599 483 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms