RNA–Protein interactions for RNA: ENST00000581536.5

TOP3A-211, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-211ENST00000581536 TMEM87BQ96K49 555 aa11.25□□□□□ -0.61
TOP3A-211ENST00000581536 GLT1D1Q96MS3 346 aa11.25□□□□□ -0.61
TOP3A-211ENST00000581536 RMDN3Q96TC7 470 aa11.25□□□□□ -0.61
TOP3A-211ENST00000581536 BRPF3Q9ULD4 1205 aa11.25□□□□□ -0.61
TOP3A-211ENST00000581536 ARVCFO00192 962 aa11.24□□□□□ -0.61
TOP3A-211ENST00000581536 TXNP10599 105 aaKnown RBP11.24□□□□□ -0.61
TOP3A-211ENST00000581536 MYCLP12524 364 aaPredicted RBP11.24□□□□□ -0.61
TOP3A-211ENST00000581536 ARHGEF16Q5VV41 709 aa11.24□□□□□ -0.61
TOP3A-211ENST00000581536 CCDC62Q6P9F0 684 aa11.24□□□□□ -0.61
TOP3A-211ENST00000581536 DHX32Q7L7V1 743 aaKnown RBP11.24□□□□□ -0.61
TOP3A-211ENST00000581536 ANKRD33Q7Z3H0 272 aa11.24□□□□□ -0.61
TOP3A-211ENST00000581536 METTL3Q86U44 580 aaKnown RBP11.24□□□□□ -0.61
TOP3A-211ENST00000581536 FCHSD1Q86WN1 690 aa11.24□□□□□ -0.61
TOP3A-211ENST00000581536 TMTC2Q8N394 836 aa11.24□□□□□ -0.61
TOP3A-211ENST00000581536 FANCBQ8NB91 859 aa11.24□□□□□ -0.61
TOP3A-211ENST00000581536 OR6J1Q8NGC5 347 aa11.24□□□□□ -0.61
TOP3A-211ENST00000581536 NSUN6Q8TEA1 469 aaKnown RBP11.24□□□□□ -0.61
TOP3A-211ENST00000581536 MAP3K14Q99558 947 aa11.24□□□□□ -0.61
TOP3A-211ENST00000581536 LBHD1Q9BQE6 289 aaPredicted RBP11.24□□□□□ -0.61
TOP3A-211ENST00000581536 MTA3Q9BTC8 594 aa11.24□□□□□ -0.61
TOP3A-211ENST00000581536 PXMP2Q9NR77 195 aa11.24□□□□□ -0.61
TOP3A-211ENST00000581536 TMEM39AQ9NV64 488 aa11.24□□□□□ -0.61
TOP3A-211ENST00000581536 PPP4R2Q9NY27 417 aa11.24□□□□□ -0.61
TOP3A-211ENST00000581536 PRKAG2Q9UGJ0 569 aa11.24□□□□□ -0.61
TOP3A-211ENST00000581536 Q9Y3F1 56 aa11.24□□□□□ -0.61
TOP3A-211ENST00000581536 ELP1O95163 1332 aa11.24□□□□□ -0.61
TOP3A-211ENST00000581536 LOC102724159A0A0B4J2E5 919 aa11.23□□□□□ -0.61
TOP3A-211ENST00000581536 RBAK-RBAKDNI3L0D1 243 aa11.23□□□□□ -0.61
TOP3A-211ENST00000581536 SORBS3O60504 671 aa11.23□□□□□ -0.61
TOP3A-211ENST00000581536 DDAH1O94760 285 aa11.23□□□□□ -0.61
TOP3A-211ENST00000581536 NR3C2P08235 984 aa11.23□□□□□ -0.61
TOP3A-211ENST00000581536 MYL3P08590 195 aa11.23□□□□□ -0.61
TOP3A-211ENST00000581536 CLTBP09497 229 aa11.23□□□□□ -0.61
TOP3A-211ENST00000581536 EPHB4P54760 987 aa11.23□□□□□ -0.61
TOP3A-211ENST00000581536 PWP2Q15269 919 aaKnown RBP11.23□□□□□ -0.61
TOP3A-211ENST00000581536 SHHQ15465 462 aa11.23□□□□□ -0.61
TOP3A-211ENST00000581536 STXBP2Q15833 593 aa11.23□□□□□ -0.61
TOP3A-211ENST00000581536 RNF20Q5VTR2 975 aa11.23□□□□□ -0.61
TOP3A-211ENST00000581536 IL31RAQ8NI17 732 aa11.23□□□□□ -0.61
TOP3A-211ENST00000581536 CTCFLQ8NI51 663 aaPredicted RBP11.23□□□□□ -0.61
TOP3A-211ENST00000581536 GPKOWQ92917 476 aaPredicted RBP eCLIP11.23□□□□□ -0.61
TOP3A-211ENST00000581536 KCNB2Q92953 911 aa11.23□□□□□ -0.61
TOP3A-211ENST00000581536 KCTD12Q96CX2 325 aaKnown RBP11.23□□□□□ -0.61
TOP3A-211ENST00000581536 IWS1Q96ST2 819 aa11.23□□□□□ -0.61
TOP3A-211ENST00000581536 BCAS3Q9H6U6 928 aa11.23□□□□□ -0.61
TOP3A-211ENST00000581536 SNX14Q9Y5W7 946 aa11.23□□□□□ -0.61
TOP3A-211ENST00000581536 SLC12A7Q9Y666 1083 aa11.23□□□□□ -0.61
TOP3A-211ENST00000581536 A0A0U1RQG5 324 aaPredicted RBP11.22□□□□□ -0.61
TOP3A-211ENST00000581536 DCDC2CA8MYV0 355 aa11.22□□□□□ -0.61
TOP3A-211ENST00000581536 GCOM1H8Y6P7 765 aaPredicted RBP11.22□□□□□ -0.61
TOP3A-211ENST00000581536 KIAA0355O15063 1070 aa11.22□□□□□ -0.61
TOP3A-211ENST00000581536 RGS20O76081 388 aa11.22□□□□□ -0.61
TOP3A-211ENST00000581536 POLR2MP0CAP2 368 aa11.22□□□□□ -0.61
TOP3A-211ENST00000581536 DNAJB2P25686 324 aa11.22□□□□□ -0.61
TOP3A-211ENST00000581536 HSPA4P34932 840 aa11.22□□□□□ -0.61
TOP3A-211ENST00000581536 GHRHRQ02643 423 aa11.22□□□□□ -0.61
TOP3A-211ENST00000581536 ITGA7Q13683 1181 aa11.22□□□□□ -0.61
TOP3A-211ENST00000581536 SCN5AQ14524 2016 aa11.22□□□□□ -0.61
TOP3A-211ENST00000581536 C9orf50Q5SZB4 431 aa11.22□□□□□ -0.61
TOP3A-211ENST00000581536 USP17L6PQ6QN14 398 aa11.22□□□□□ -0.61
TOP3A-211ENST00000581536 SGMS1Q86VZ5 419 aa11.22□□□□□ -0.61
TOP3A-211ENST00000581536 TDHQ8IZJ6 230 aa11.22□□□□□ -0.61
TOP3A-211ENST00000581536 SLC43A3Q8NBI5 491 aa11.22□□□□□ -0.61
TOP3A-211ENST00000581536 SCFD2Q8WU76 684 aa11.22□□□□□ -0.61
TOP3A-211ENST00000581536 RRP36Q96EU6 259 aaKnown RBP11.22□□□□□ -0.61
TOP3A-211ENST00000581536 TOX2Q96NM4 488 aa11.22□□□□□ -0.61
TOP3A-211ENST00000581536 PDCD2LQ9BRP1 358 aa11.22□□□□□ -0.61
TOP3A-211ENST00000581536 SPZ1Q9BXG8 430 aa11.22□□□□□ -0.61
TOP3A-211ENST00000581536 TRPV6Q9H1D0 765 aa11.22□□□□□ -0.61
TOP3A-211ENST00000581536 FAM217BQ9NTX9 383 aaPredicted RBP11.22□□□□□ -0.61
TOP3A-211ENST00000581536 DDX41Q9UJV9 622 aaKnown RBP11.22□□□□□ -0.61
TOP3A-211ENST00000581536 SCN10AQ9Y5Y9 1956 aa11.21□□□□□ -0.61
TOP3A-211ENST00000581536 A0A1W2PPC1 479 aa11.21□□□□□ -0.61
TOP3A-211ENST00000581536 RCCD1A6NED2 376 aa11.21□□□□□ -0.61
TOP3A-211ENST00000581536 B4DLN1 442 aa11.21□□□□□ -0.61
TOP3A-211ENST00000581536 MEIS2O14770 477 aa11.21□□□□□ -0.61
TOP3A-211ENST00000581536 EIF3JO75822 258 aaKnown RBP11.21□□□□□ -0.61
TOP3A-211ENST00000581536 CD4P01730 458 aa11.21□□□□□ -0.61
TOP3A-211ENST00000581536 CALM1P0DP23 149 aa11.21□□□□□ -0.61
TOP3A-211ENST00000581536 CALM2P0DP24 149 aa11.21□□□□□ -0.61
TOP3A-211ENST00000581536 CALM3P0DP25 149 aa11.21□□□□□ -0.61
TOP3A-211ENST00000581536 RAG1P15918 1043 aa11.21□□□□□ -0.61
TOP3A-211ENST00000581536 SMARCA1P28370 1054 aa11.21□□□□□ -0.61
TOP3A-211ENST00000581536 KIF5BP33176 963 aa11.21□□□□□ -0.61
TOP3A-211ENST00000581536 MRPL12P52815 198 aaKnown RBP11.21□□□□□ -0.61
TOP3A-211ENST00000581536 SP2Q02086 613 aa11.21□□□□□ -0.61
TOP3A-211ENST00000581536 ARHGAP1Q07960 439 aa11.21□□□□□ -0.61
TOP3A-211ENST00000581536 TTLL4Q14679 1199 aa11.21□□□□□ -0.61
TOP3A-211ENST00000581536 PGM5Q15124 567 aa11.21□□□□□ -0.61
TOP3A-211ENST00000581536 PPP2R5BQ15173 497 aa11.21□□□□□ -0.61
TOP3A-211ENST00000581536 APOA5Q6Q788 366 aa11.21□□□□□ -0.61
TOP3A-211ENST00000581536 Q6ZUG5 572 aa11.21□□□□□ -0.61
TOP3A-211ENST00000581536 VSIG10LQ86VR7 867 aa11.21□□□□□ -0.61
TOP3A-211ENST00000581536 MICU3Q86XE3 530 aa11.21□□□□□ -0.61
TOP3A-211ENST00000581536 FAM126BQ8IXS8 530 aa11.21□□□□□ -0.61
TOP3A-211ENST00000581536 AFG1LQ8WV93 481 aa11.21□□□□□ -0.61
TOP3A-211ENST00000581536 JAKMIP1Q96N16 626 aaKnown RBP11.21□□□□□ -0.61
TOP3A-211ENST00000581536 MPHOSPH6Q99547 160 aaKnown RBP11.21□□□□□ -0.61
TOP3A-211ENST00000581536 MAF1Q9H063 256 aa11.21□□□□□ -0.61
TOP3A-211ENST00000581536 RTEL1Q9NZ71 1219 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms