RNA–Protein interactions for RNA: ENST00000581220.1

RIOK3-204, Transcript of RIO kinase 3, humanhuman

TSL 2

Gene RIOK3, Length 2,384 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIOK3-204ENST00000581220 DNA2P51530 1060 aa9.4□□□□□ -0.9
RIOK3-204ENST00000581220 GUCY2FP51841 1108 aa9.4□□□□□ -0.9
RIOK3-204ENST00000581220 TNNC1P63316 161 aa9.4□□□□□ -0.9
RIOK3-204ENST00000581220 SLC4A8Q2Y0W8 1093 aa9.4□□□□□ -0.9
RIOK3-204ENST00000581220 SOGA3Q5TF21 947 aa9.4□□□□□ -0.9
RIOK3-204ENST00000581220 SFMBT2Q5VUG0 894 aa9.4□□□□□ -0.9
RIOK3-204ENST00000581220 MAATS1Q7Z4T9 603 aa9.4□□□□□ -0.9
RIOK3-204ENST00000581220 YTHDF3Q7Z739 585 aaKnown RBP9.4□□□□□ -0.9
RIOK3-204ENST00000581220 GPIHBP1Q8IV16 184 aa9.4□□□□□ -0.9
RIOK3-204ENST00000581220 ATP6V1G3Q96LB4 118 aa9.4□□□□□ -0.9
RIOK3-204ENST00000581220 KRT12Q99456 494 aa9.4□□□□□ -0.9
RIOK3-204ENST00000581220 IL17RBQ9NRM6 502 aa9.4□□□□□ -0.9
RIOK3-204ENST00000581220 ESYT3A0FGR9 886 aa9.39□□□□□ -0.91
RIOK3-204ENST00000581220 WTIPA6NIX2 430 aaPredicted RBP9.39□□□□□ -0.91
RIOK3-204ENST00000581220 PALMO75781 387 aa9.39□□□□□ -0.91
RIOK3-204ENST00000581220 PPP1R37O75864 691 aa9.39□□□□□ -0.91
RIOK3-204ENST00000581220 CAMTA2O94983 1202 aa9.39□□□□□ -0.91
RIOK3-204ENST00000581220 SERPING1P05155 500 aa9.39□□□□□ -0.91
RIOK3-204ENST00000581220 FAM153BP0C7A2 387 aa9.39□□□□□ -0.91
RIOK3-204ENST00000581220 GUCY1A3Q02108 690 aa9.39□□□□□ -0.91
RIOK3-204ENST00000581220 PTGISQ16647 500 aa9.39□□□□□ -0.91
RIOK3-204ENST00000581220 ASTE1Q2TB18 679 aaPredicted RBP9.39□□□□□ -0.91
RIOK3-204ENST00000581220 FAM153CQ494X1 144 aa9.39□□□□□ -0.91
RIOK3-204ENST00000581220 RNF187Q5TA31 235 aaPredicted RBP9.39□□□□□ -0.91
RIOK3-204ENST00000581220 EMC10Q5UCC4 262 aa9.39□□□□□ -0.91
RIOK3-204ENST00000581220 NAA35Q5VZE5 725 aa9.39□□□□□ -0.91
RIOK3-204ENST00000581220 DYMQ7RTS9 669 aa9.39□□□□□ -0.91
RIOK3-204ENST00000581220 ZNF444Q8N0Y2 327 aaPredicted RBP9.39□□□□□ -0.91
RIOK3-204ENST00000581220 ARFGAP2Q8N6H7 521 aa9.39□□□□□ -0.91
RIOK3-204ENST00000581220 GPATCH11Q8N954 259 aa9.39□□□□□ -0.91
RIOK3-204ENST00000581220 C1orf131Q8NDD1 294 aaKnown RBP9.39□□□□□ -0.91
RIOK3-204ENST00000581220 ZNF473Q8WTR7 871 aaKnown RBP9.39□□□□□ -0.91
RIOK3-204ENST00000581220 LRRC27Q9C0I9 530 aa9.39□□□□□ -0.91
RIOK3-204ENST00000581220 ZMYND12Q9H0C1 365 aa9.39□□□□□ -0.91
RIOK3-204ENST00000581220 RIC8AQ9NPQ8 531 aa9.39□□□□□ -0.91
RIOK3-204ENST00000581220 CEP72Q9P209 647 aa9.39□□□□□ -0.91
RIOK3-204ENST00000581220 STK17AQ9UEE5 414 aa9.39□□□□□ -0.91
RIOK3-204ENST00000581220 FAM153AQ9UHL3 310 aa9.39□□□□□ -0.91
RIOK3-204ENST00000581220 SMCO2A6NFE2 343 aa9.39□□□□□ -0.91
RIOK3-204ENST00000581220 RBAK-RBAKDNI3L0D1 243 aa9.39□□□□□ -0.91
RIOK3-204ENST00000581220 CYTH3O43739 400 aa9.39□□□□□ -0.91
RIOK3-204ENST00000581220 USP17L8P0C7I0 530 aa9.39□□□□□ -0.91
RIOK3-204ENST00000581220 MDH1P40925 334 aaKnown RBP9.39□□□□□ -0.91
RIOK3-204ENST00000581220 TXKP42681 527 aa9.39□□□□□ -0.91
RIOK3-204ENST00000581220 CRKLP46109 303 aaKnown RBP9.39□□□□□ -0.91
RIOK3-204ENST00000581220 ATP2B2Q01814 1243 aa9.39□□□□□ -0.91
RIOK3-204ENST00000581220 ORC2Q13416 577 aaPredicted RBP9.39□□□□□ -0.91
RIOK3-204ENST00000581220 CDC37Q16543 378 aaPredicted RBP9.39□□□□□ -0.91
RIOK3-204ENST00000581220 TMEM266Q2M3C6 531 aa9.39□□□□□ -0.91
RIOK3-204ENST00000581220 INTS5Q6P9B9 1019 aaKnown RBP9.39□□□□□ -0.91
RIOK3-204ENST00000581220 KCNV1Q6PIU1 500 aa9.39□□□□□ -0.91
RIOK3-204ENST00000581220 FBXO33Q7Z6M2 555 aa9.39□□□□□ -0.91
RIOK3-204ENST00000581220 NLRP14Q86W24 1093 aa9.39□□□□□ -0.91
RIOK3-204ENST00000581220 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.39□□□□□ -0.91
RIOK3-204ENST00000581220 LARP4BQ92615 738 aaKnown RBP9.39□□□□□ -0.91
RIOK3-204ENST00000581220 TAF4BQ92750 862 aa9.39□□□□□ -0.91
RIOK3-204ENST00000581220 SYN2Q92777 582 aaPredicted RBP9.39□□□□□ -0.91
RIOK3-204ENST00000581220 PAGR1Q9BTK6 254 aa9.39□□□□□ -0.91
RIOK3-204ENST00000581220 NLRC4Q9NPP4 1024 aa9.39□□□□□ -0.91
RIOK3-204ENST00000581220 MINPP1Q9UNW1 487 aa9.39□□□□□ -0.91
RIOK3-204ENST00000581220 A0A0G2JS52 829 aa9.38□□□□□ -0.91
RIOK3-204ENST00000581220 MYMKA6NI61 221 aa9.38□□□□□ -0.91
RIOK3-204ENST00000581220 KLRF2D3W0D1 207 aa9.38□□□□□ -0.91
RIOK3-204ENST00000581220 FTCDO95954 541 aa9.38□□□□□ -0.91
RIOK3-204ENST00000581220 PSMD2Q13200 908 aa9.38□□□□□ -0.91
RIOK3-204ENST00000581220 NAB2Q15742 525 aa9.38□□□□□ -0.91
RIOK3-204ENST00000581220 CCDC40Q4G0X9 1142 aa9.38□□□□□ -0.91
RIOK3-204ENST00000581220 CEP85LQ5SZL2 805 aa9.38□□□□□ -0.91
RIOK3-204ENST00000581220 C12orf60Q5U649 245 aa9.38□□□□□ -0.91
RIOK3-204ENST00000581220 HGSNATQ68CP4 663 aa9.38□□□□□ -0.91
RIOK3-204ENST00000581220 PROM2Q8N271 834 aa9.38□□□□□ -0.91
RIOK3-204ENST00000581220 CASKIN2Q8WXE0 1202 aa9.38□□□□□ -0.91
RIOK3-204ENST00000581220 CCT8L2Q96SF2 557 aa9.38□□□□□ -0.91
RIOK3-204ENST00000581220 MMTAG2Q9BU76 263 aaKnown RBP9.38□□□□□ -0.91
RIOK3-204ENST00000581220 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.38□□□□□ -0.91
RIOK3-204ENST00000581220 RAB34Q9BZG1 259 aa9.38□□□□□ -0.91
RIOK3-204ENST00000581220 SEC63Q9UGP8 760 aaKnown RBP9.38□□□□□ -0.91
RIOK3-204ENST00000581220 STX8Q9UNK0 236 aa9.38□□□□□ -0.91
RIOK3-204ENST00000581220 ZNF652Q9Y2D9 606 aa9.38□□□□□ -0.91
RIOK3-204ENST00000581220 USP17L3A6NCW0 530 aa9.38□□□□□ -0.91
RIOK3-204ENST00000581220 USP17L4A6NCW7 530 aa9.38□□□□□ -0.91
RIOK3-204ENST00000581220 PALM3A6NDB9 673 aaPredicted RBP9.38□□□□□ -0.91
RIOK3-204ENST00000581220 ZSCAN5CA6NGD5 496 aaPredicted RBP9.38□□□□□ -0.91
RIOK3-204ENST00000581220 SRRM3A6NNA2 597 aaPredicted RBP9.38□□□□□ -0.91
RIOK3-204ENST00000581220 E7EVH7 732 aa9.38□□□□□ -0.91
RIOK3-204ENST00000581220 MYO1FO00160 1098 aa9.38□□□□□ -0.91
RIOK3-204ENST00000581220 ERCC3P19447 782 aa9.38□□□□□ -0.91
RIOK3-204ENST00000581220 PRDX5P30044 214 aa9.38□□□□□ -0.91
RIOK3-204ENST00000581220 HIBADHP31937 336 aaKnown RBP9.38□□□□□ -0.91
RIOK3-204ENST00000581220 MAP2K2P36507 400 aa9.38□□□□□ -0.91
RIOK3-204ENST00000581220 ATP6V1AP38606 617 aa9.38□□□□□ -0.91
RIOK3-204ENST00000581220 FNTAP49354 379 aa9.38□□□□□ -0.91
RIOK3-204ENST00000581220 EHHADHQ08426 723 aa9.38□□□□□ -0.91
RIOK3-204ENST00000581220 HLTFQ14527 1009 aaKnown RBP eCLIP9.38□□□□□ -0.91
RIOK3-204ENST00000581220 MEI1Q5TIA1 1274 aa9.38□□□□□ -0.91
RIOK3-204ENST00000581220 SPTY2D1Q68D10 685 aaPredicted RBP9.38□□□□□ -0.91
RIOK3-204ENST00000581220 PPP4R3AQ6IN85 833 aa9.38□□□□□ -0.91
RIOK3-204ENST00000581220 USP17L1Q7RTZ2 530 aa9.38□□□□□ -0.91
RIOK3-204ENST00000581220 DZIP1Q86YF9 867 aaKnown RBP9.38□□□□□ -0.91
RIOK3-204ENST00000581220 TBCKQ8TEA7 893 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms