RNA–Protein interactions for RNA: ENST00000580541.1

SKA2-205, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-205ENST00000580541 MRVI1Q9Y6F6 885 aa16.18■□□□□ 0.18
SKA2-205ENST00000580541 FAM205CA6NFA0 338 aa16.17■□□□□ 0.18
SKA2-205ENST00000580541 SPATA31C2B4DYI2 1134 aa16.17■□□□□ 0.18
SKA2-205ENST00000580541 FAM86B1E9PN63 330 aa16.17■□□□□ 0.18
SKA2-205ENST00000580541 FAM86B2P0C5J1 330 aa16.17■□□□□ 0.18
SKA2-205ENST00000580541 ITGB5P18084 799 aa16.17■□□□□ 0.18
SKA2-205ENST00000580541 CAP1Q01518 475 aa16.17■□□□□ 0.18
SKA2-205ENST00000580541 SF3A1Q15459 793 aaKnown RBP16.17■□□□□ 0.18
SKA2-205ENST00000580541 SLC9C1Q4G0N8 1177 aa16.17■□□□□ 0.18
SKA2-205ENST00000580541 ANO1Q5XXA6 986 aa16.17■□□□□ 0.18
SKA2-205ENST00000580541 SDF4Q9BRK5 362 aa16.17■□□□□ 0.18
SKA2-205ENST00000580541 ZNF577Q9BSK1 485 aa16.17■□□□□ 0.18
SKA2-205ENST00000580541 RAB34Q9BZG1 259 aa16.17■□□□□ 0.18
SKA2-205ENST00000580541 WDR11Q9BZH6 1224 aa16.17■□□□□ 0.18
SKA2-205ENST00000580541 SCAND2PQ9GZW5 306 aaPredicted RBP16.17■□□□□ 0.18
SKA2-205ENST00000580541 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.17■□□□□ 0.18
SKA2-205ENST00000580541 POLR3EQ9NVU0 708 aa16.17■□□□□ 0.18
SKA2-205ENST00000580541 ZHX1Q9UKY1 873 aaPredicted RBP16.17■□□□□ 0.18
SKA2-205ENST00000580541 PCDHB6Q9Y5E3 794 aa16.17■□□□□ 0.18
SKA2-205ENST00000580541 PTCH2Q9Y6C5 1203 aa16.17■□□□□ 0.18
SKA2-205ENST00000580541 LCTP09848 1927 aa16.16■□□□□ 0.18
SKA2-205ENST00000580541 IGLV3-22A0A075B6J6 115 aa16.16■□□□□ 0.18
SKA2-205ENST00000580541 RBM47A0AV96 593 aaKnown RBP16.16■□□□□ 0.18
SKA2-205ENST00000580541 IPO5O00410 1097 aaKnown RBP16.16■□□□□ 0.18
SKA2-205ENST00000580541 MSCO60682 206 aa16.16■□□□□ 0.18
SKA2-205ENST00000580541 TDP2O95551 362 aa16.16■□□□□ 0.18
SKA2-205ENST00000580541 IGHA2P01877 340 aa16.16■□□□□ 0.18
SKA2-205ENST00000580541 TXNP10599 105 aaKnown RBP16.16■□□□□ 0.18
SKA2-205ENST00000580541 ELNP15502 786 aa16.16■□□□□ 0.18
SKA2-205ENST00000580541 NCLP19338 710 aaKnown RBP16.16■□□□□ 0.18
SKA2-205ENST00000580541 PTGDRQ13258 359 aa16.16■□□□□ 0.18
SKA2-205ENST00000580541 STK38Q15208 465 aa16.16■□□□□ 0.18
SKA2-205ENST00000580541 TMEM266Q2M3C6 531 aa16.16■□□□□ 0.18
SKA2-205ENST00000580541 ARL6IP4Q66PJ3 421 aaKnown RBP16.16■□□□□ 0.18
SKA2-205ENST00000580541 FBXO16Q8IX29 292 aaPredicted RBP16.16■□□□□ 0.18
SKA2-205ENST00000580541 RIT2Q99578 217 aa16.16■□□□□ 0.18
SKA2-205ENST00000580541 HMX1Q9NP08 348 aaPredicted RBP16.16■□□□□ 0.18
SKA2-205ENST00000580541 MCM3APO60318 1980 aa16.16■□□□□ 0.18
SKA2-205ENST00000580541 YEATS4O95619 227 aa16.15■□□□□ 0.18
SKA2-205ENST00000580541 OR52Z1P0C646 297 aa16.15■□□□□ 0.18
SKA2-205ENST00000580541 PRKAR2AP13861 404 aaKnown RBP16.15■□□□□ 0.18
SKA2-205ENST00000580541 AKR1A1P14550 325 aa16.15■□□□□ 0.18
SKA2-205ENST00000580541 CNGA1P29973 690 aa16.15■□□□□ 0.18
SKA2-205ENST00000580541 PRPHP41219 470 aa16.15■□□□□ 0.18
SKA2-205ENST00000580541 TNFAIP2Q03169 654 aa16.15■□□□□ 0.18
SKA2-205ENST00000580541 CCDC144BQ3MJ40 725 aa16.15■□□□□ 0.18
SKA2-205ENST00000580541 BRDTQ58F21 947 aaPredicted RBP16.15■□□□□ 0.18
SKA2-205ENST00000580541 TAPT1Q6NXT6 567 aa16.15■□□□□ 0.18
SKA2-205ENST00000580541 DTHD1Q6ZMT9 781 aa16.15■□□□□ 0.18
SKA2-205ENST00000580541 CYP2W1Q8TAV3 490 aa16.15■□□□□ 0.18
SKA2-205ENST00000580541 KCNG4Q8TDN1 519 aa16.15■□□□□ 0.18
SKA2-205ENST00000580541 SPC25Q9HBM1 224 aa16.15■□□□□ 0.18
SKA2-205ENST00000580541 AGO4Q9HCK5 861 aaKnown RBP16.15■□□□□ 0.18
SKA2-205ENST00000580541 TFIP11Q9UBB9 837 aaKnown RBP16.15■□□□□ 0.18
SKA2-205ENST00000580541 PCDHA12Q9UN75 941 aa16.15■□□□□ 0.18
SKA2-205ENST00000580541 Q9Y3F1 56 aa16.15■□□□□ 0.18
SKA2-205ENST00000580541 STK24Q9Y6E0 443 aa16.15■□□□□ 0.18
SKA2-205ENST00000580541 MORC2Q9Y6X9 1032 aaPredicted RBP16.15■□□□□ 0.18
SKA2-205ENST00000580541 KIAA1217Q5T5P2 1943 aa16.15■□□□□ 0.18
SKA2-205ENST00000580541 NFASCO94856 1347 aa16.15■□□□□ 0.18
SKA2-205ENST00000580541 SEPT4O43236 478 aa16.14■□□□□ 0.17
SKA2-205ENST00000580541 GAS7O60861 476 aa16.14■□□□□ 0.17
SKA2-205ENST00000580541 RGS20O76081 388 aa16.14■□□□□ 0.17
SKA2-205ENST00000580541 ZNF865P0CJ78 1059 aaPredicted RBP16.14■□□□□ 0.17
SKA2-205ENST00000580541 ARP10275 920 aa16.14■□□□□ 0.17
SKA2-205ENST00000580541 NASPP49321 788 aaPredicted RBP16.14■□□□□ 0.17
SKA2-205ENST00000580541 CEBPZQ03701 1054 aaKnown RBP16.14■□□□□ 0.17
SKA2-205ENST00000580541 DNM1Q05193 864 aaKnown RBP16.14■□□□□ 0.17
SKA2-205ENST00000580541 CACNB2Q08289 660 aaPredicted RBP16.14■□□□□ 0.17
SKA2-205ENST00000580541 LAMC2Q13753 1193 aa16.14■□□□□ 0.17
SKA2-205ENST00000580541 SLC39A14Q15043 492 aa16.14■□□□□ 0.17
SKA2-205ENST00000580541 FOXD4L6Q3SYB3 417 aaPredicted RBP16.14■□□□□ 0.17
SKA2-205ENST00000580541 DUSP28Q4G0W2 176 aa16.14■□□□□ 0.17
SKA2-205ENST00000580541 PRAMEF19Q5SWL8 479 aa16.14■□□□□ 0.17
SKA2-205ENST00000580541 FAM173BQ6P4H8 233 aa16.14■□□□□ 0.17
SKA2-205ENST00000580541 FOXD4L3Q6VB84 417 aaPredicted RBP16.14■□□□□ 0.17
SKA2-205ENST00000580541 DHX37Q8IY37 1157 aaKnown RBP16.14■□□□□ 0.17
SKA2-205ENST00000580541 FERMT2Q96AC1 680 aa16.14■□□□□ 0.17
SKA2-205ENST00000580541 ZFP91Q96JP5 570 aaPredicted RBP16.14■□□□□ 0.17
SKA2-205ENST00000580541 KATNBL1Q9H079 304 aa16.14■□□□□ 0.17
SKA2-205ENST00000580541 MLXIPQ9HAP2 919 aa16.14■□□□□ 0.17
SKA2-205ENST00000580541 KCNMB3Q9NPA1 279 aa16.14■□□□□ 0.17
SKA2-205ENST00000580541 DDX41Q9UJV9 622 aaKnown RBP16.14■□□□□ 0.17
SKA2-205ENST00000580541 ZSWIM8A7E2V4 1837 aa16.14■□□□□ 0.17
SKA2-205ENST00000580541 MSH4O15457 936 aa16.13■□□□□ 0.17
SKA2-205ENST00000580541 SLC37A4O43826 429 aa16.13■□□□□ 0.17
SKA2-205ENST00000580541 EDIL3O43854 480 aa16.13■□□□□ 0.17
SKA2-205ENST00000580541 PPP6R2O75170 966 aa16.13■□□□□ 0.17
SKA2-205ENST00000580541 GH1P01241 217 aa16.13■□□□□ 0.17
SKA2-205ENST00000580541 INHAP05111 366 aa16.13■□□□□ 0.17
SKA2-205ENST00000580541 CYBAP13498 195 aa16.13■□□□□ 0.17
SKA2-205ENST00000580541 ATP2C1P98194 919 aaPredicted RBP16.13■□□□□ 0.17
SKA2-205ENST00000580541 PDIA5Q14554 519 aa16.13■□□□□ 0.17
SKA2-205ENST00000580541 MAP3K21Q5TCX8 1036 aa16.13■□□□□ 0.17
SKA2-205ENST00000580541 LRCH2Q5VUJ6 765 aa16.13■□□□□ 0.17
SKA2-205ENST00000580541 CCDC62Q6P9F0 684 aa16.13■□□□□ 0.17
SKA2-205ENST00000580541 SLC5A5Q92911 643 aa16.13■□□□□ 0.17
SKA2-205ENST00000580541 LENG9Q96B70 501 aa16.13■□□□□ 0.17
SKA2-205ENST00000580541 GBP4Q96PP9 640 aa16.13■□□□□ 0.17
SKA2-205ENST00000580541 MTMR9Q96QG7 549 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms