RNA–Protein interactions for RNA: ENST00000578789.1

MKS1-207, Transcript of Meckel syndrome, type 1, humanhuman

TSL 4

Gene MKS1, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-207ENST00000578789 PPFIA3O75145 1194 aa16.56■□□□□ 0.24
MKS1-207ENST00000578789 CDKL5O76039 1030 aa16.56■□□□□ 0.24
MKS1-207ENST00000578789 DEXIO95424 95 aa16.56■□□□□ 0.24
MKS1-207ENST00000578789 NEK4P51957 841 aa16.56■□□□□ 0.24
MKS1-207ENST00000578789 SSRP1Q08945 709 aaKnown RBP16.56■□□□□ 0.24
MKS1-207ENST00000578789 LAMC2Q13753 1193 aa16.56■□□□□ 0.24
MKS1-207ENST00000578789 CELF3Q5SZQ8 465 aaKnown RBP16.56■□□□□ 0.24
MKS1-207ENST00000578789 PPTC7Q8NI37 304 aa16.56■□□□□ 0.24
MKS1-207ENST00000578789 AFG1LQ8WV93 481 aa16.56■□□□□ 0.24
MKS1-207ENST00000578789 GPRASP2Q96D09 838 aa16.56■□□□□ 0.24
MKS1-207ENST00000578789 KIF2CQ99661 725 aa16.56■□□□□ 0.24
MKS1-207ENST00000578789 MTG1Q9BT17 334 aaPredicted RBP16.56■□□□□ 0.24
MKS1-207ENST00000578789 ANO3Q9BYT9 981 aa16.56■□□□□ 0.24
MKS1-207ENST00000578789 C6orf50Q9HD87 102 aa16.56■□□□□ 0.24
MKS1-207ENST00000578789 SH3GLB2Q9NR46 395 aa16.56■□□□□ 0.24
MKS1-207ENST00000578789 UBIAD1Q9Y5Z9 338 aa16.56■□□□□ 0.24
MKS1-207ENST00000578789 DNAH12Q6ZR08 3092 aa16.55■□□□□ 0.24
MKS1-207ENST00000578789 PQBP1O60828 265 aaKnown RBP16.55■□□□□ 0.24
MKS1-207ENST00000578789 GGPS1O95749 300 aa16.55■□□□□ 0.24
MKS1-207ENST00000578789 MYL3P08590 195 aa16.55■□□□□ 0.24
MKS1-207ENST00000578789 CLTBP09497 229 aa16.55■□□□□ 0.24
MKS1-207ENST00000578789 HOXD8P13378 290 aaPredicted RBP16.55■□□□□ 0.24
MKS1-207ENST00000578789 GNA11P29992 359 aa16.55■□□□□ 0.24
MKS1-207ENST00000578789 SREBF1P36956 1147 aa16.55■□□□□ 0.24
MKS1-207ENST00000578789 SP2Q02086 613 aa16.55■□□□□ 0.24
MKS1-207ENST00000578789 ITGA7Q13683 1181 aa16.55■□□□□ 0.24
MKS1-207ENST00000578789 MYSM1Q5VVJ2 828 aa16.55■□□□□ 0.24
MKS1-207ENST00000578789 CHRDL2Q6WN34 429 aa16.55■□□□□ 0.24
MKS1-207ENST00000578789 NLRX1Q86UT6 975 aa16.55■□□□□ 0.24
MKS1-207ENST00000578789 FAM126BQ8IXS8 530 aa16.55■□□□□ 0.24
MKS1-207ENST00000578789 DHX37Q8IY37 1157 aaKnown RBP16.55■□□□□ 0.24
MKS1-207ENST00000578789 FAM177A1Q8N128 213 aaPredicted RBP16.55■□□□□ 0.24
MKS1-207ENST00000578789 VTI1AQ96AJ9 217 aa16.55■□□□□ 0.24
MKS1-207ENST00000578789 GDF15Q99988 308 aa16.55■□□□□ 0.24
MKS1-207ENST00000578789 C22orf23Q9BZE7 217 aa16.55■□□□□ 0.24
MKS1-207ENST00000578789 TMEM260Q9NX78 707 aa16.55■□□□□ 0.24
MKS1-207ENST00000578789 RTEL1Q9NZ71 1219 aa16.55■□□□□ 0.24
MKS1-207ENST00000578789 VPS54Q9P1Q0 977 aa16.55■□□□□ 0.24
MKS1-207ENST00000578789 DCDC2CA8MYV0 355 aa16.54■□□□□ 0.24
MKS1-207ENST00000578789 LARGE1O95461 756 aa16.54■□□□□ 0.24
MKS1-207ENST00000578789 ITGB5P18084 799 aa16.54■□□□□ 0.24
MKS1-207ENST00000578789 MAGEA10P43363 369 aaPredicted RBP16.54■□□□□ 0.24
MKS1-207ENST00000578789 PSMC6P62333 389 aa16.54■□□□□ 0.24
MKS1-207ENST00000578789 FAAP100Q0VG06 881 aa16.54■□□□□ 0.24
MKS1-207ENST00000578789 NEDD9Q14511 834 aa16.54■□□□□ 0.24
MKS1-207ENST00000578789 ME3Q16798 604 aa16.54■□□□□ 0.24
MKS1-207ENST00000578789 MCTP2Q6DN12 878 aa16.54■□□□□ 0.24
MKS1-207ENST00000578789 REXO1Q8N1G1 1221 aaKnown RBP16.54■□□□□ 0.24
MKS1-207ENST00000578789 GTF3C6Q969F1 213 aa16.54■□□□□ 0.24
MKS1-207ENST00000578789 CDHR1Q96JP9 859 aa16.54■□□□□ 0.24
MKS1-207ENST00000578789 PGBD1Q96JS3 809 aa16.54■□□□□ 0.24
MKS1-207ENST00000578789 SENP7Q9BQF6 1050 aa16.54■□□□□ 0.24
MKS1-207ENST00000578789 PRKAG2Q9UGJ0 569 aa16.54■□□□□ 0.24
MKS1-207ENST00000578789 COLQQ9Y215 455 aaPredicted RBP16.54■□□□□ 0.24
MKS1-207ENST00000578789 TRIM43BA6NCK2 446 aa16.53■□□□□ 0.24
MKS1-207ENST00000578789 KIAA0355O15063 1070 aa16.53■□□□□ 0.24
MKS1-207ENST00000578789 ADAMTS3O15072 1205 aa16.53■□□□□ 0.24
MKS1-207ENST00000578789 CTDNEP1O95476 244 aa16.53■□□□□ 0.24
MKS1-207ENST00000578789 CD4P01730 458 aa16.53■□□□□ 0.24
MKS1-207ENST00000578789 BMP8BP34820 402 aa16.53■□□□□ 0.24
MKS1-207ENST00000578789 DGKDQ16760 1214 aa16.53■□□□□ 0.24
MKS1-207ENST00000578789 METTL7BQ6UX53 244 aa16.53■□□□□ 0.24
MKS1-207ENST00000578789 SH3RF1Q7Z6J0 888 aa16.53■□□□□ 0.24
MKS1-207ENST00000578789 BICD2Q8TD16 824 aa16.53■□□□□ 0.24
MKS1-207ENST00000578789 CRYGNQ8WXF5 182 aa16.53■□□□□ 0.24
MKS1-207ENST00000578789 TRIM43Q96BQ3 446 aaPredicted RBP16.53■□□□□ 0.24
MKS1-207ENST00000578789 JADE2Q9NQC1 790 aa16.53■□□□□ 0.24
MKS1-207ENST00000578789 PRDM5Q9NQX1 630 aaPredicted RBP16.53■□□□□ 0.24
MKS1-207ENST00000578789 TBX21Q9UL17 535 aa16.53■□□□□ 0.24
MKS1-207ENST00000578789 TLR3O15455 904 aaKnown RBP16.52■□□□□ 0.24
MKS1-207ENST00000578789 KCNA2P16389 499 aa16.52■□□□□ 0.24
MKS1-207ENST00000578789 ARHGAP4P98171 946 aa16.52■□□□□ 0.24
MKS1-207ENST00000578789 HSDL1Q3SXM5 330 aa16.52■□□□□ 0.24
MKS1-207ENST00000578789 JAKMIP3Q5VZ66 844 aa16.52■□□□□ 0.24
MKS1-207ENST00000578789 KAT2BQ92831 832 aa16.52■□□□□ 0.24
MKS1-207ENST00000578789 SPATA33Q96N06 139 aa16.52■□□□□ 0.24
MKS1-207ENST00000578789 MLXIPQ9HAP2 919 aa16.52■□□□□ 0.24
MKS1-207ENST00000578789 A0A1W2PPC1 479 aa16.51■□□□□ 0.23
MKS1-207ENST00000578789 MAFGO15525 162 aa16.51■□□□□ 0.23
MKS1-207ENST00000578789 SLC34A2O95436 690 aa16.51■□□□□ 0.23
MKS1-207ENST00000578789 F2P00734 622 aa16.51■□□□□ 0.23
MKS1-207ENST00000578789 CYP3A4P08684 503 aa16.51■□□□□ 0.23
MKS1-207ENST00000578789 PTPN11Q06124 597 aaPredicted RBP16.51■□□□□ 0.23
MKS1-207ENST00000578789 MTMR1Q13613 665 aa16.51■□□□□ 0.23
MKS1-207ENST00000578789 NFRKBQ6P4R8 1299 aa16.51■□□□□ 0.23
MKS1-207ENST00000578789 DAGLBQ8NCG7 672 aa16.51■□□□□ 0.23
MKS1-207ENST00000578789 GIMAP8Q8ND71 665 aaPredicted RBP16.51■□□□□ 0.23
MKS1-207ENST00000578789 AIFM3Q96NN9 605 aa16.51■□□□□ 0.23
MKS1-207ENST00000578789 MXRA8Q9BRK3 442 aa16.51■□□□□ 0.23
MKS1-207ENST00000578789 BCAS3Q9H6U6 928 aa16.51■□□□□ 0.23
MKS1-207ENST00000578789 TMEM39AQ9NV64 488 aa16.51■□□□□ 0.23
MKS1-207ENST00000578789 PCDH10Q9P2E7 1040 aa16.51■□□□□ 0.23
MKS1-207ENST00000578789 GTF3C3Q9Y5Q9 886 aa16.51■□□□□ 0.23
MKS1-207ENST00000578789 M0R2N6 131 aa16.5■□□□□ 0.23
MKS1-207ENST00000578789 HAS3O00219 553 aa16.5■□□□□ 0.23
MKS1-207ENST00000578789 SORBS3O60504 671 aa16.5■□□□□ 0.23
MKS1-207ENST00000578789 B4GALT4O60513 344 aa16.5■□□□□ 0.23
MKS1-207ENST00000578789 PPFIA4O75335 1185 aa16.5■□□□□ 0.23
MKS1-207ENST00000578789 NLRP5P59047 1200 aa16.5■□□□□ 0.23
MKS1-207ENST00000578789 ST3GAL1Q11201 340 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms