RNA–Protein interactions for RNA: ENST00000578519.5

SKA2-204, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3

Gene SKA2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-204ENST00000578519 EDIL3O43854 480 aa12.4□□□□□ -0.42
SKA2-204ENST00000578519 PPP1R12BO60237 982 aaPredicted RBP12.4□□□□□ -0.42
SKA2-204ENST00000578519 SSBP05455 408 aaKnown RBP eCLIP12.4□□□□□ -0.42
SKA2-204ENST00000578519 PLA2G4BP0C869 781 aa12.4□□□□□ -0.42
SKA2-204ENST00000578519 BCRP11274 1271 aa12.4□□□□□ -0.42
SKA2-204ENST00000578519 HOXA13P31271 388 aaPredicted RBP12.4□□□□□ -0.42
SKA2-204ENST00000578519 NF2P35240 595 aa12.4□□□□□ -0.42
SKA2-204ENST00000578519 HSD17B4P51659 736 aa12.4□□□□□ -0.42
SKA2-204ENST00000578519 GHRHRQ02643 423 aa12.4□□□□□ -0.42
SKA2-204ENST00000578519 LRRC63Q05C16 580 aa12.4□□□□□ -0.42
SKA2-204ENST00000578519 CEP55Q53EZ4 464 aa12.4□□□□□ -0.42
SKA2-204ENST00000578519 TCP11X2Q5H9J9 407 aa12.4□□□□□ -0.42
SKA2-204ENST00000578519 CNGA4Q8IV77 575 aa12.4□□□□□ -0.42
SKA2-204ENST00000578519 CSGALNACT2Q8N6G5 542 aa12.4□□□□□ -0.42
SKA2-204ENST00000578519 DDX12PQ92771 950 aa12.4□□□□□ -0.42
SKA2-204ENST00000578519 C12orf42Q96LP6 360 aa12.4□□□□□ -0.42
SKA2-204ENST00000578519 WRNIP1Q96S55 665 aa12.4□□□□□ -0.42
SKA2-204ENST00000578519 RIT2Q99578 217 aa12.4□□□□□ -0.42
SKA2-204ENST00000578519 NUP58Q9BVL2 599 aa12.4□□□□□ -0.42
SKA2-204ENST00000578519 TEKT3Q9BXF9 490 aa12.4□□□□□ -0.42
SKA2-204ENST00000578519 SLC38A10Q9HBR0 1119 aa12.4□□□□□ -0.42
SKA2-204ENST00000578519 ADARB2Q9NS39 739 aaKnown RBP12.4□□□□□ -0.42
SKA2-204ENST00000578519 PANK4Q9NVE7 773 aa12.4□□□□□ -0.42
SKA2-204ENST00000578519 HOXC10Q9NYD6 342 aa12.4□□□□□ -0.42
SKA2-204ENST00000578519 ADD3Q9UEY8 706 aaKnown RBP12.4□□□□□ -0.42
SKA2-204ENST00000578519 PYCARDQ9ULZ3 195 aa12.4□□□□□ -0.42
SKA2-204ENST00000578519 GDAQ9Y2T3 454 aa12.4□□□□□ -0.42
SKA2-204ENST00000578519 MYPNQ86TC9 1320 aa12.39□□□□□ -0.43
SKA2-204ENST00000578519 ZNF541Q9H0D2 1346 aa12.39□□□□□ -0.43
SKA2-204ENST00000578519 ARFGEF1Q9Y6D6 1849 aa12.39□□□□□ -0.43
SKA2-204ENST00000578519 SHTN1A0MZ66 631 aa12.39□□□□□ -0.43
SKA2-204ENST00000578519 MYMKA6NI61 221 aa12.39□□□□□ -0.43
SKA2-204ENST00000578519 ARHGAP6O43182 974 aa12.39□□□□□ -0.43
SKA2-204ENST00000578519 STX10O60499 249 aa12.39□□□□□ -0.43
SKA2-204ENST00000578519 GAS7O60861 476 aa12.39□□□□□ -0.43
SKA2-204ENST00000578519 PTPRAP18433 802 aa12.39□□□□□ -0.43
SKA2-204ENST00000578519 INPP5BP32019 993 aa12.39□□□□□ -0.43
SKA2-204ENST00000578519 DNM2P50570 870 aa12.39□□□□□ -0.43
SKA2-204ENST00000578519 COPB1P53618 953 aaKnown RBP12.39□□□□□ -0.43
SKA2-204ENST00000578519 LRMPQ12912 555 aa12.39□□□□□ -0.43
SKA2-204ENST00000578519 SPP2Q13103 211 aa12.39□□□□□ -0.43
SKA2-204ENST00000578519 KIAA1755Q5JYT7 1200 aa12.39□□□□□ -0.43
SKA2-204ENST00000578519 FKBP15Q5T1M5 1219 aa12.39□□□□□ -0.43
SKA2-204ENST00000578519 LRCH2Q5VUJ6 765 aa12.39□□□□□ -0.43
SKA2-204ENST00000578519 STXBP4Q6ZWJ1 553 aa12.39□□□□□ -0.43
SKA2-204ENST00000578519 SMYD4Q8IYR2 804 aaPredicted RBP12.39□□□□□ -0.43
SKA2-204ENST00000578519 NLGN2Q8NFZ4 835 aa12.39□□□□□ -0.43
SKA2-204ENST00000578519 PANX2Q96RD6 677 aa12.39□□□□□ -0.43
SKA2-204ENST00000578519 MXRA8Q9BRK3 442 aa12.39□□□□□ -0.43
SKA2-204ENST00000578519 SRRTQ9BXP5 876 aaKnown RBP12.39□□□□□ -0.43
SKA2-204ENST00000578519 RPAP3Q9H6T3 665 aaPredicted RBP12.39□□□□□ -0.43
SKA2-204ENST00000578519 PAXBP1Q9Y5B6 917 aa12.39□□□□□ -0.43
SKA2-204ENST00000578519 BRCA1P38398 1863 aaKnown RBP12.39□□□□□ -0.43
SKA2-204ENST00000578519 A0A1W2PQC6 194 aa12.38□□□□□ -0.43
SKA2-204ENST00000578519 OPLAHO14841 1288 aa12.38□□□□□ -0.43
SKA2-204ENST00000578519 MSH4O15457 936 aa12.38□□□□□ -0.43
SKA2-204ENST00000578519 EYA4O95677 639 aa12.38□□□□□ -0.43
SKA2-204ENST00000578519 GNA14O95837 355 aa12.38□□□□□ -0.43
SKA2-204ENST00000578519 ALAS1P13196 640 aa12.38□□□□□ -0.43
SKA2-204ENST00000578519 GAP43P17677 238 aa12.38□□□□□ -0.43
SKA2-204ENST00000578519 VCAM1P19320 739 aa12.38□□□□□ -0.43
SKA2-204ENST00000578519 PRELPP51888 382 aa12.38□□□□□ -0.43
SKA2-204ENST00000578519 TBX2Q13207 712 aaPredicted RBP12.38□□□□□ -0.43
SKA2-204ENST00000578519 PPP2R5CQ13362 524 aa12.38□□□□□ -0.43
SKA2-204ENST00000578519 MTMR2Q13614 643 aa12.38□□□□□ -0.43
SKA2-204ENST00000578519 COG2Q14746 738 aa12.38□□□□□ -0.43
SKA2-204ENST00000578519 EPHA7Q15375 998 aa12.38□□□□□ -0.43
SKA2-204ENST00000578519 PTPN14Q15678 1187 aa12.38□□□□□ -0.43
SKA2-204ENST00000578519 CENPPQ6IPU0 288 aa12.38□□□□□ -0.43
SKA2-204ENST00000578519 DYMQ7RTS9 669 aa12.38□□□□□ -0.43
SKA2-204ENST00000578519 GPBP1Q86WP2 473 aa12.38□□□□□ -0.43
SKA2-204ENST00000578519 CREBRFQ8IUR6 639 aa12.38□□□□□ -0.43
SKA2-204ENST00000578519 SULF1Q8IWU6 871 aa12.38□□□□□ -0.43
SKA2-204ENST00000578519 MYOCDQ8IZQ8 938 aa12.38□□□□□ -0.43
SKA2-204ENST00000578519 SYT2Q8N9I0 419 aaPredicted RBP12.38□□□□□ -0.43
SKA2-204ENST00000578519 RETREG2Q8NC44 543 aa12.38□□□□□ -0.43
SKA2-204ENST00000578519 SLC5A5Q92911 643 aa12.38□□□□□ -0.43
SKA2-204ENST00000578519 NACC1Q96RE7 527 aa12.38□□□□□ -0.43
SKA2-204ENST00000578519 ZNF577Q9BSK1 485 aa12.38□□□□□ -0.43
SKA2-204ENST00000578519 TBC1D22BQ9NU19 505 aa12.38□□□□□ -0.43
SKA2-204ENST00000578519 GGA3Q9NZ52 723 aa12.38□□□□□ -0.43
SKA2-204ENST00000578519 KCND2Q9NZV8 630 aa12.38□□□□□ -0.43
SKA2-204ENST00000578519 R3HCC1Q9Y3T6 440 aaKnown RBP12.38□□□□□ -0.43
SKA2-204ENST00000578519 CSADQ9Y600 493 aa12.38□□□□□ -0.43
SKA2-204ENST00000578519 FAM86B1E9PN63 330 aa12.37□□□□□ -0.43
SKA2-204ENST00000578519 MEIS1O00470 390 aa12.37□□□□□ -0.43
SKA2-204ENST00000578519 MAFGO15525 162 aa12.37□□□□□ -0.43
SKA2-204ENST00000578519 DKC1O60832 514 aaKnown RBP eCLIP12.37□□□□□ -0.43
SKA2-204ENST00000578519 FAM86B2P0C5J1 330 aa12.37□□□□□ -0.43
SKA2-204ENST00000578519 MTIF2P46199 727 aaKnown RBP12.37□□□□□ -0.43
SKA2-204ENST00000578519 IREB2P48200 963 aaKnown RBP12.37□□□□□ -0.43
SKA2-204ENST00000578519 MAP3K9P80192 1104 aa12.37□□□□□ -0.43
SKA2-204ENST00000578519 CCZ1BP86790 482 aa12.37□□□□□ -0.43
SKA2-204ENST00000578519 CCZ1P86791 482 aaPredicted RBP12.37□□□□□ -0.43
SKA2-204ENST00000578519 KRT31Q15323 416 aa12.37□□□□□ -0.43
SKA2-204ENST00000578519 HERC4Q5GLZ8 1057 aaPredicted RBP12.37□□□□□ -0.43
SKA2-204ENST00000578519 FAM26FQ5R3K3 315 aa12.37□□□□□ -0.43
SKA2-204ENST00000578519 TTI2Q6NXR4 508 aa12.37□□□□□ -0.43
SKA2-204ENST00000578519 CDAN1Q8IWY9 1227 aa12.37□□□□□ -0.43
SKA2-204ENST00000578519 CPXCR1Q8N123 301 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms