RNA–Protein interactions for RNA: ENST00000578469.1

SREBF1-218, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 588 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-218ENST00000578469 VGLL4Q14135 290 aa19.04■□□□□ 0.64
SREBF1-218ENST00000578469 KIF22Q14807 665 aa19.04■□□□□ 0.64
SREBF1-218ENST00000578469 PRR16Q569H4 304 aa19.04■□□□□ 0.64
SREBF1-218ENST00000578469 SH3D19Q5HYK7 790 aa19.04■□□□□ 0.64
SREBF1-218ENST00000578469 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.04■□□□□ 0.64
SREBF1-218ENST00000578469 HAS1Q92839 578 aa19.04■□□□□ 0.64
SREBF1-218ENST00000578469 FAM20AQ96MK3 541 aa19.04■□□□□ 0.64
SREBF1-218ENST00000578469 P2RX7Q99572 595 aaKnown RBP19.04■□□□□ 0.64
SREBF1-218ENST00000578469 RAVER2Q9HCJ3 691 aaKnown RBP19.04■□□□□ 0.64
SREBF1-218ENST00000578469 KCNMB3Q9NPA1 279 aa19.04■□□□□ 0.64
SREBF1-218ENST00000578469 SNCAIPQ9Y6H5 919 aa19.04■□□□□ 0.64
SREBF1-218ENST00000578469 MYH7BA7E2Y1 1941 aa19.04■□□□□ 0.64
SREBF1-218ENST00000578469 PLCG1P19174 1290 aa19.03■□□□□ 0.64
SREBF1-218ENST00000578469 HSD17B4P51659 736 aa19.03■□□□□ 0.64
SREBF1-218ENST00000578469 OAZ1P54368 228 aa19.03■□□□□ 0.64
SREBF1-218ENST00000578469 COG2Q14746 738 aa19.03■□□□□ 0.64
SREBF1-218ENST00000578469 SNX29Q8TEQ0 813 aa19.03■□□□□ 0.64
SREBF1-218ENST00000578469 TBC1D5Q92609 795 aa19.03■□□□□ 0.64
SREBF1-218ENST00000578469 CCDC47Q96A33 483 aaKnown RBP19.03■□□□□ 0.64
SREBF1-218ENST00000578469 MS4A4AQ96JQ5 239 aa19.03■□□□□ 0.64
SREBF1-218ENST00000578469 STK17AQ9UEE5 414 aa19.03■□□□□ 0.64
SREBF1-218ENST00000578469 PTCH2Q9Y6C5 1203 aa19.03■□□□□ 0.64
SREBF1-218ENST00000578469 MYPNQ86TC9 1320 aa19.02■□□□□ 0.64
SREBF1-218ENST00000578469 BRCA2P51587 3418 aa19.02■□□□□ 0.64
SREBF1-218ENST00000578469 VWA5AO00534 786 aa19.02■□□□□ 0.64
SREBF1-218ENST00000578469 PTMAP06454 111 aaKnown RBP19.02■□□□□ 0.64
SREBF1-218ENST00000578469 DSG3P32926 999 aa19.02■□□□□ 0.64
SREBF1-218ENST00000578469 GHRHRQ02643 423 aa19.02■□□□□ 0.64
SREBF1-218ENST00000578469 HS1BP3Q53T59 392 aa19.02■□□□□ 0.64
SREBF1-218ENST00000578469 SARM1Q6SZW1 724 aa19.02■□□□□ 0.64
SREBF1-218ENST00000578469 CATSPERGQ6ZRH7 1159 aa19.02■□□□□ 0.64
SREBF1-218ENST00000578469 BRI3BPQ8WY22 251 aa19.02■□□□□ 0.64
SREBF1-218ENST00000578469 ATG4CQ96DT6 458 aa19.02■□□□□ 0.64
SREBF1-218ENST00000578469 OTUD5Q96G74 571 aa19.02■□□□□ 0.64
SREBF1-218ENST00000578469 PLIN2Q99541 437 aa19.02■□□□□ 0.64
SREBF1-218ENST00000578469 TRIM5Q9C035 493 aa19.02■□□□□ 0.64
SREBF1-218ENST00000578469 LRRC27Q9C0I9 530 aa19.02■□□□□ 0.64
SREBF1-218ENST00000578469 HOXC10Q9NYD6 342 aa19.02■□□□□ 0.64
SREBF1-218ENST00000578469 KDM3AQ9Y4C1 1321 aa19.01■□□□□ 0.63
SREBF1-218ENST00000578469 MYL5Q02045 173 aa19.01■□□□□ 0.63
SREBF1-218ENST00000578469 NAALADL2Q58DX5 795 aa19.01■□□□□ 0.63
SREBF1-218ENST00000578469 ERMNQ8TAM6 284 aa19.01■□□□□ 0.63
SREBF1-218ENST00000578469 CLEC4DQ8WXI8 215 aa19.01■□□□□ 0.63
SREBF1-218ENST00000578469 STAMQ92783 540 aa19.01■□□□□ 0.63
SREBF1-218ENST00000578469 MMTAG2Q9BU76 263 aaKnown RBP19.01■□□□□ 0.63
SREBF1-218ENST00000578469 GTPBP4Q9BZE4 634 aaKnown RBP19.01■□□□□ 0.63
SREBF1-218ENST00000578469 KBTBD4Q9NVX7 518 aa19.01■□□□□ 0.63
SREBF1-218ENST00000578469 CEP290O15078 2479 aa19■□□□□ 0.63
SREBF1-218ENST00000578469 POTEMA6NI47 508 aa19■□□□□ 0.63
SREBF1-218ENST00000578469 RPN1P04843 607 aaKnown RBP19■□□□□ 0.63
SREBF1-218ENST00000578469 PPATQ06203 517 aa19■□□□□ 0.63
SREBF1-218ENST00000578469 CUL4BQ13620 913 aa19■□□□□ 0.63
SREBF1-218ENST00000578469 TKFCQ3LXA3 575 aa19■□□□□ 0.63
SREBF1-218ENST00000578469 SV2BQ7L1I2 683 aa19■□□□□ 0.63
SREBF1-218ENST00000578469 ERO1BQ86YB8 467 aa19■□□□□ 0.63
SREBF1-218ENST00000578469 ETNPPLQ8TBG4 499 aa19■□□□□ 0.63
SREBF1-218ENST00000578469 TRERF1Q96PN7 1200 aa19■□□□□ 0.63
SREBF1-218ENST00000578469 NT5C3AQ9H0P0 336 aa19■□□□□ 0.63
SREBF1-218ENST00000578469 BLZF1Q9H2G9 400 aa19■□□□□ 0.63
SREBF1-218ENST00000578469 ZCCHC17Q9NP64 241 aaKnown RBP19■□□□□ 0.63
SREBF1-218ENST00000578469 PHIPQ8WWQ0 1821 aa19■□□□□ 0.63
SREBF1-218ENST00000578469 GOLGA6L6A8MZA4 724 aa18.99■□□□□ 0.63
SREBF1-218ENST00000578469 FAM86B1E9PN63 330 aa18.99■□□□□ 0.63
SREBF1-218ENST00000578469 FAM86B2P0C5J1 330 aa18.99■□□□□ 0.63
SREBF1-218ENST00000578469 CETPP11597 493 aa18.99■□□□□ 0.63
SREBF1-218ENST00000578469 BMP6P22004 513 aa18.99■□□□□ 0.63
SREBF1-218ENST00000578469 ERCC5P28715 1186 aaPredicted RBP18.99■□□□□ 0.63
SREBF1-218ENST00000578469 CCT6AP40227 531 aaKnown RBP18.99■□□□□ 0.63
SREBF1-218ENST00000578469 FXR1P51114 621 aaKnown RBP eCLIP18.99■□□□□ 0.63
SREBF1-218ENST00000578469 ZNF75DP51815 510 aa18.99■□□□□ 0.63
SREBF1-218ENST00000578469 SETQ01105 290 aaPredicted RBP18.99■□□□□ 0.63
SREBF1-218ENST00000578469 GRB10Q13322 594 aa18.99■□□□□ 0.63
SREBF1-218ENST00000578469 HAUS3Q68CZ6 603 aa18.99■□□□□ 0.63
SREBF1-218ENST00000578469 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.99■□□□□ 0.63
SREBF1-218ENST00000578469 CNKSR2Q8WXI2 1034 aa18.99■□□□□ 0.63
SREBF1-218ENST00000578469 PNMA5Q96PV4 448 aa18.99■□□□□ 0.63
SREBF1-218ENST00000578469 MTRQ99707 1265 aa18.99■□□□□ 0.63
SREBF1-218ENST00000578469 MAF1Q9H063 256 aa18.99■□□□□ 0.63
SREBF1-218ENST00000578469 ADAMTS5Q9UNA0 930 aa18.99■□□□□ 0.63
SREBF1-218ENST00000578469 SPDYE5A6NIY4 337 aa18.98■□□□□ 0.63
SREBF1-218ENST00000578469 NFIBO00712 420 aa18.98■□□□□ 0.63
SREBF1-218ENST00000578469 CXCL11O14625 94 aa18.98■□□□□ 0.63
SREBF1-218ENST00000578469 AP5Z1O43299 807 aa18.98■□□□□ 0.63
SREBF1-218ENST00000578469 GNRH1P01148 92 aa18.98■□□□□ 0.63
SREBF1-218ENST00000578469 CASP1P29466 404 aa18.98■□□□□ 0.63
SREBF1-218ENST00000578469 KCNB1Q14721 858 aa18.98■□□□□ 0.63
SREBF1-218ENST00000578469 TMEM119Q4V9L6 283 aa18.98■□□□□ 0.63
SREBF1-218ENST00000578469 PLA2G4DQ86XP0 818 aa18.98■□□□□ 0.63
SREBF1-218ENST00000578469 FAM43AQ8N2R8 423 aa18.98■□□□□ 0.63
SREBF1-218ENST00000578469 ENOX1Q8TC92 643 aaKnown RBP18.98■□□□□ 0.63
SREBF1-218ENST00000578469 LENG9Q96B70 501 aa18.98■□□□□ 0.63
SREBF1-218ENST00000578469 C7orf25Q9BPX7 421 aa18.98■□□□□ 0.63
SREBF1-218ENST00000578469 HOMER2Q9NSB8 354 aa18.98■□□□□ 0.63
SREBF1-218ENST00000578469 RNF146Q9NTX7 359 aa18.98■□□□□ 0.63
SREBF1-218ENST00000578469 ATP2A1O14983 1001 aa18.97■□□□□ 0.63
SREBF1-218ENST00000578469 MSH4O15457 936 aa18.97■□□□□ 0.63
SREBF1-218ENST00000578469 TLR2O60603 784 aa18.97■□□□□ 0.63
SREBF1-218ENST00000578469 PRMT2P55345 433 aa18.97■□□□□ 0.63
SREBF1-218ENST00000578469 CAP1Q01518 475 aa18.97■□□□□ 0.63
SREBF1-218ENST00000578469 SNAPC2Q13487 334 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms