RNA–Protein interactions for RNA: ENST00000578208.1

GGA3-204, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 3

Gene GGA3, Length 478 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-204ENST00000578208 IFNAR1P17181 557 aa13.31□□□□□ -0.28
GGA3-204ENST00000578208 UBA1P22314 1058 aaKnown RBP13.31□□□□□ -0.28
GGA3-204ENST00000578208 MRPS9P82933 396 aaKnown RBP13.31□□□□□ -0.28
GGA3-204ENST00000578208 SSRP1Q08945 709 aaKnown RBP13.31□□□□□ -0.28
GGA3-204ENST00000578208 STK3Q13188 491 aa13.31□□□□□ -0.28
GGA3-204ENST00000578208 AP3B2Q13367 1082 aa13.31□□□□□ -0.28
GGA3-204ENST00000578208 CELF3Q5SZQ8 465 aaKnown RBP13.31□□□□□ -0.28
GGA3-204ENST00000578208 FAM126BQ8IXS8 530 aa13.31□□□□□ -0.28
GGA3-204ENST00000578208 CCDC148Q8NFR7 591 aa13.31□□□□□ -0.28
GGA3-204ENST00000578208 PPTC7Q8NI37 304 aa13.31□□□□□ -0.28
GGA3-204ENST00000578208 BADQ92934 168 aa13.31□□□□□ -0.28
GGA3-204ENST00000578208 PHKBQ93100 1093 aa13.31□□□□□ -0.28
GGA3-204ENST00000578208 SPATA33Q96N06 139 aa13.31□□□□□ -0.28
GGA3-204ENST00000578208 KATNAL1Q9BW62 490 aa13.31□□□□□ -0.28
GGA3-204ENST00000578208 NCOA5Q9HCD5 579 aaKnown RBP13.31□□□□□ -0.28
GGA3-204ENST00000578208 C6orf50Q9HD87 102 aa13.31□□□□□ -0.28
GGA3-204ENST00000578208 LTBP2Q14767 1821 aa13.3□□□□□ -0.28
GGA3-204ENST00000578208 SORBS3O60504 671 aa13.3□□□□□ -0.28
GGA3-204ENST00000578208 CDKL5O76039 1030 aa13.3□□□□□ -0.28
GGA3-204ENST00000578208 GNA11P29992 359 aa13.3□□□□□ -0.28
GGA3-204ENST00000578208 ICAM3P32942 547 aa13.3□□□□□ -0.28
GGA3-204ENST00000578208 NBPF20Q3BBV1 942 aa13.3□□□□□ -0.28
GGA3-204ENST00000578208 MCTP2Q6DN12 878 aa13.3□□□□□ -0.28
GGA3-204ENST00000578208 TYW1BQ6NUM6 668 aa13.3□□□□□ -0.28
GGA3-204ENST00000578208 GIMAP8Q8ND71 665 aaPredicted RBP13.3□□□□□ -0.28
GGA3-204ENST00000578208 BICD2Q8TD16 824 aa13.3□□□□□ -0.28
GGA3-204ENST00000578208 GPRASP2Q96D09 838 aa13.3□□□□□ -0.28
GGA3-204ENST00000578208 LARP6Q9BRS8 491 aaKnown RBP13.3□□□□□ -0.28
GGA3-204ENST00000578208 ANO3Q9BYT9 981 aa13.3□□□□□ -0.28
GGA3-204ENST00000578208 ALDH8A1Q9H2A2 487 aaPredicted RBP13.3□□□□□ -0.28
GGA3-204ENST00000578208 SLKQ9H2G2 1235 aaPredicted RBP13.3□□□□□ -0.28
GGA3-204ENST00000578208 TBX21Q9UL17 535 aa13.3□□□□□ -0.28
GGA3-204ENST00000578208 NOD1Q9Y239 953 aa13.3□□□□□ -0.28
GGA3-204ENST00000578208 ESYT2A0FGR8 921 aa13.29□□□□□ -0.28
GGA3-204ENST00000578208 SPATA31C2B4DYI2 1134 aa13.29□□□□□ -0.28
GGA3-204ENST00000578208 DEXIO95424 95 aa13.29□□□□□ -0.28
GGA3-204ENST00000578208 TIMP1P01033 207 aa13.29□□□□□ -0.28
GGA3-204ENST00000578208 FPGSQ05932 587 aa13.29□□□□□ -0.28
GGA3-204ENST00000578208 PTPN11Q06124 597 aaPredicted RBP13.29□□□□□ -0.28
GGA3-204ENST00000578208 MTMR1Q13613 665 aa13.29□□□□□ -0.28
GGA3-204ENST00000578208 NTRK3Q16288 839 aa13.29□□□□□ -0.28
GGA3-204ENST00000578208 MYSM1Q5VVJ2 828 aa13.29□□□□□ -0.28
GGA3-204ENST00000578208 NFRKBQ6P4R8 1299 aa13.29□□□□□ -0.28
GGA3-204ENST00000578208 METTL7BQ6UX53 244 aa13.29□□□□□ -0.28
GGA3-204ENST00000578208 TMEM199Q8N511 208 aa13.29□□□□□ -0.28
GGA3-204ENST00000578208 PPP1R12CQ9BZL4 782 aa13.29□□□□□ -0.28
GGA3-204ENST00000578208 HIPK3Q9H422 1215 aa13.29□□□□□ -0.28
GGA3-204ENST00000578208 PCDH10Q9P2E7 1040 aa13.29□□□□□ -0.28
GGA3-204ENST00000578208 GRIN2DO15399 1336 aa13.29□□□□□ -0.28
GGA3-204ENST00000578208 MAFGO15525 162 aa13.28□□□□□ -0.28
GGA3-204ENST00000578208 B4GALT4O60513 344 aa13.28□□□□□ -0.28
GGA3-204ENST00000578208 PPFIA3O75145 1194 aa13.28□□□□□ -0.28
GGA3-204ENST00000578208 PPFIA4O75335 1185 aa13.28□□□□□ -0.28
GGA3-204ENST00000578208 CD4P01730 458 aa13.28□□□□□ -0.28
GGA3-204ENST00000578208 ZNF286BP0CG31 522 aa13.28□□□□□ -0.28
GGA3-204ENST00000578208 ZNF76P36508 570 aa13.28□□□□□ -0.28
GGA3-204ENST00000578208 SP2Q02086 613 aa13.28□□□□□ -0.28
GGA3-204ENST00000578208 PPIGQ13427 754 aaKnown RBP eCLIP13.28□□□□□ -0.28
GGA3-204ENST00000578208 JAKMIP3Q5VZ66 844 aa13.28□□□□□ -0.28
GGA3-204ENST00000578208 CYFIP1Q7L576 1253 aa13.28□□□□□ -0.28
GGA3-204ENST00000578208 REXO1Q8N1G1 1221 aaKnown RBP13.28□□□□□ -0.28
GGA3-204ENST00000578208 C7orf31Q8N865 590 aa13.28□□□□□ -0.28
GGA3-204ENST00000578208 PGBD1Q96JS3 809 aa13.28□□□□□ -0.28
GGA3-204ENST00000578208 SENP7Q9BQF6 1050 aa13.28□□□□□ -0.28
GGA3-204ENST00000578208 ZMYND12Q9H0C1 365 aa13.28□□□□□ -0.28
GGA3-204ENST00000578208 TRPV6Q9H1D0 765 aa13.28□□□□□ -0.28
GGA3-204ENST00000578208 F2P00734 622 aa13.27□□□□□ -0.29
GGA3-204ENST00000578208 SREBF1P36956 1147 aa13.27□□□□□ -0.29
GGA3-204ENST00000578208 PSEN2P49810 448 aa13.27□□□□□ -0.29
GGA3-204ENST00000578208 FXR1P51114 621 aaKnown RBP eCLIP13.27□□□□□ -0.29
GGA3-204ENST00000578208 NEK4P51957 841 aa13.27□□□□□ -0.29
GGA3-204ENST00000578208 AK2P54819 239 aa13.27□□□□□ -0.29
GGA3-204ENST00000578208 SP4Q02446 784 aa13.27□□□□□ -0.29
GGA3-204ENST00000578208 MFSD10Q14728 455 aa13.27□□□□□ -0.29
GGA3-204ENST00000578208 PKN1Q16512 942 aa13.27□□□□□ -0.29
GGA3-204ENST00000578208 HSDL1Q3SXM5 330 aa13.27□□□□□ -0.29
GGA3-204ENST00000578208 MFSD5Q6N075 450 aa13.27□□□□□ -0.29
GGA3-204ENST00000578208 CCDC155Q8N6L0 562 aa13.27□□□□□ -0.29
GGA3-204ENST00000578208 IL17RAQ96F46 866 aa13.27□□□□□ -0.29
GGA3-204ENST00000578208 MXRA8Q9BRK3 442 aa13.27□□□□□ -0.29
GGA3-204ENST00000578208 ALG1Q9BT22 464 aa13.27□□□□□ -0.29
GGA3-204ENST00000578208 UPF2Q9HAU5 1272 aaKnown RBP13.27□□□□□ -0.29
GGA3-204ENST00000578208 JADE2Q9NQC1 790 aa13.27□□□□□ -0.29
GGA3-204ENST00000578208 SH3GLB2Q9NR46 395 aa13.27□□□□□ -0.29
GGA3-204ENST00000578208 TRMT13Q9NUP7 481 aaKnown RBP13.27□□□□□ -0.29
GGA3-204ENST00000578208 TMEM260Q9NX78 707 aa13.27□□□□□ -0.29
GGA3-204ENST00000578208 VPS54Q9P1Q0 977 aa13.27□□□□□ -0.29
GGA3-204ENST00000578208 TPCN1Q9ULQ1 816 aa13.27□□□□□ -0.29
GGA3-204ENST00000578208 UBIAD1Q9Y5Z9 338 aa13.27□□□□□ -0.29
GGA3-204ENST00000578208 PFKFB2O60825 505 aa13.26□□□□□ -0.29
GGA3-204ENST00000578208 SEC24BO95487 1268 aa13.26□□□□□ -0.29
GGA3-204ENST00000578208 HOXD8P13378 290 aaPredicted RBP13.26□□□□□ -0.29
GGA3-204ENST00000578208 XBP1P17861 261 aa13.26□□□□□ -0.29
GGA3-204ENST00000578208 ITGB8P26012 769 aa13.26□□□□□ -0.29
GGA3-204ENST00000578208 CLK2P49760 499 aaKnown RBP13.26□□□□□ -0.29
GGA3-204ENST00000578208 NLRP5P59047 1200 aa13.26□□□□□ -0.29
GGA3-204ENST00000578208 ARHGAP4P98171 946 aa13.26□□□□□ -0.29
GGA3-204ENST00000578208 SEMA3FQ13275 785 aa13.26□□□□□ -0.29
GGA3-204ENST00000578208 KIAA0753Q2KHM9 967 aa13.26□□□□□ -0.29
GGA3-204ENST00000578208 C8orf34Q49A92 452 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms