RNA–Protein interactions for RNA: ENST00000577716.5

RNF43-203, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 4,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-203ENST00000577716 CTIFO43310 598 aaKnown RBP11.89□□□□□ -0.51
RNF43-203ENST00000577716 MAP2P11137 1827 aaKnown RBP11.89□□□□□ -0.51
RNF43-203ENST00000577716 CAPN12Q6ZSI9 719 aa11.89□□□□□ -0.51
RNF43-203ENST00000577716 LMNTD2Q8IXW0 634 aa11.89□□□□□ -0.51
RNF43-203ENST00000577716 C1orf112Q9NSG2 853 aa11.89□□□□□ -0.51
RNF43-203ENST00000577716 HDAC6Q9UBN7 1215 aa11.89□□□□□ -0.51
RNF43-203ENST00000577716 PASKQ96RG2 1323 aa11.89□□□□□ -0.51
RNF43-203ENST00000577716 ZNF335Q9H4Z2 1342 aaPredicted RBP11.89□□□□□ -0.51
RNF43-203ENST00000577716 FAM205CA6NFA0 338 aa11.89□□□□□ -0.51
RNF43-203ENST00000577716 ZBED4O75132 1171 aa11.89□□□□□ -0.51
RNF43-203ENST00000577716 NR1D1P20393 614 aa11.89□□□□□ -0.51
RNF43-203ENST00000577716 PDE6CP51160 858 aa11.89□□□□□ -0.51
RNF43-203ENST00000577716 ANTXR2P58335 489 aa11.89□□□□□ -0.51
RNF43-203ENST00000577716 MYL7Q01449 175 aa11.89□□□□□ -0.51
RNF43-203ENST00000577716 ABCB5Q2M3G0 1257 aa11.89□□□□□ -0.51
RNF43-203ENST00000577716 UNC13DQ70J99 1090 aa11.89□□□□□ -0.51
RNF43-203ENST00000577716 IGDCC4Q8TDY8 1250 aa11.89□□□□□ -0.51
RNF43-203ENST00000577716 TMEM47Q9BQJ4 181 aa11.89□□□□□ -0.51
RNF43-203ENST00000577716 TEKT3Q9BXF9 490 aa11.89□□□□□ -0.51
RNF43-203ENST00000577716 SH3GLB2Q9NR46 395 aa11.89□□□□□ -0.51
RNF43-203ENST00000577716 GCNT4Q9P109 453 aa11.89□□□□□ -0.51
RNF43-203ENST00000577716 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.89□□□□□ -0.51
RNF43-203ENST00000577716 ARHGEF28Q8N1W1 1705 aaKnown RBP11.89□□□□□ -0.51
RNF43-203ENST00000577716 POTEMA6NI47 508 aa11.88□□□□□ -0.51
RNF43-203ENST00000577716 UBXN2AP68543 259 aa11.88□□□□□ -0.51
RNF43-203ENST00000577716 GSPT2Q8IYD1 628 aaKnown RBP11.88□□□□□ -0.51
RNF43-203ENST00000577716 VPS52Q8N1B4 723 aa11.88□□□□□ -0.51
RNF43-203ENST00000577716 SLC44A5Q8NCS7 719 aa11.88□□□□□ -0.51
RNF43-203ENST00000577716 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.88□□□□□ -0.51
RNF43-203ENST00000577716 PTPN22Q9Y2R2 807 aa11.88□□□□□ -0.51
RNF43-203ENST00000577716 CTNND1O60716 968 aaKnown RBP11.88□□□□□ -0.51
RNF43-203ENST00000577716 HSPA1LP34931 641 aa11.88□□□□□ -0.51
RNF43-203ENST00000577716 RFX5P48382 616 aaPredicted RBP11.88□□□□□ -0.51
RNF43-203ENST00000577716 SEPT2Q15019 361 aa11.88□□□□□ -0.51
RNF43-203ENST00000577716 TXNRD1Q16881 649 aa11.88□□□□□ -0.51
RNF43-203ENST00000577716 KSR1Q8IVT5 923 aa11.88□□□□□ -0.51
RNF43-203ENST00000577716 WHAMMQ8TF30 809 aa11.88□□□□□ -0.51
RNF43-203ENST00000577716 PBKQ96KB5 322 aa11.88□□□□□ -0.51
RNF43-203ENST00000577716 RUNDC3BQ96NL0 473 aa11.88□□□□□ -0.51
RNF43-203ENST00000577716 FUCA2Q9BTY2 467 aa11.88□□□□□ -0.51
RNF43-203ENST00000577716 CPDO75976 1380 aa11.88□□□□□ -0.51
RNF43-203ENST00000577716 ATF7P17544 494 aaPredicted RBP11.88□□□□□ -0.51
RNF43-203ENST00000577716 GBP1P32455 592 aa11.88□□□□□ -0.51
RNF43-203ENST00000577716 ATP2C1P98194 919 aaPredicted RBP11.88□□□□□ -0.51
RNF43-203ENST00000577716 CCDC62Q6P9F0 684 aa11.88□□□□□ -0.51
RNF43-203ENST00000577716 CCDC89Q8N998 374 aa11.88□□□□□ -0.51
RNF43-203ENST00000577716 AP1M1Q9BXS5 423 aa11.88□□□□□ -0.51
RNF43-203ENST00000577716 PICK1Q9NRD5 415 aa11.88□□□□□ -0.51
RNF43-203ENST00000577716 MINPP1Q9UNW1 487 aa11.88□□□□□ -0.51
RNF43-203ENST00000577716 MYO1FO00160 1098 aa11.88□□□□□ -0.51
RNF43-203ENST00000577716 CIB2O75838 187 aa11.88□□□□□ -0.51
RNF43-203ENST00000577716 PDCLQ13371 301 aa11.88□□□□□ -0.51
RNF43-203ENST00000577716 OTUD6AQ7L8S5 288 aa11.88□□□□□ -0.51
RNF43-203ENST00000577716 CTAGE3PQ8IX95 158 aa11.88□□□□□ -0.51
RNF43-203ENST00000577716 CCDC13Q8IYE1 715 aa11.88□□□□□ -0.51
RNF43-203ENST00000577716 MLXIPQ9HAP2 919 aa11.88□□□□□ -0.51
RNF43-203ENST00000577716 PPIP5K2O43314 1243 aa11.87□□□□□ -0.51
RNF43-203ENST00000577716 KRT19P08727 400 aa11.87□□□□□ -0.51
RNF43-203ENST00000577716 VSNL1P62760 191 aa11.87□□□□□ -0.51
RNF43-203ENST00000577716 CCDC197Q8NCU1 140 aa11.87□□□□□ -0.51
RNF43-203ENST00000577716 GRK7Q8WTQ7 553 aa11.87□□□□□ -0.51
RNF43-203ENST00000577716 KCNB2Q92953 911 aa11.87□□□□□ -0.51
RNF43-203ENST00000577716 PSMD1Q99460 953 aa11.87□□□□□ -0.51
RNF43-203ENST00000577716 KANSL2Q9H9L4 492 aa11.87□□□□□ -0.51
RNF43-203ENST00000577716 SRP68Q9UHB9 627 aaKnown RBP11.87□□□□□ -0.51
RNF43-203ENST00000577716 NOVA2Q9UNW9 492 aaKnown RBP11.87□□□□□ -0.51
RNF43-203ENST00000577716 A0A1B0GTH6 734 aa11.87□□□□□ -0.51
RNF43-203ENST00000577716 LRRC53A6NM62 1247 aa11.87□□□□□ -0.51
RNF43-203ENST00000577716 PRPF6O94906 941 aaKnown RBP11.87□□□□□ -0.51
RNF43-203ENST00000577716 GAP43P17677 238 aa11.87□□□□□ -0.51
RNF43-203ENST00000577716 TSNAXIP1Q2TAA8 658 aa11.87□□□□□ -0.51
RNF43-203ENST00000577716 ZNF354CQ86Y25 554 aa11.87□□□□□ -0.51
RNF43-203ENST00000577716 KAZALD1Q96I82 304 aa11.87□□□□□ -0.51
RNF43-203ENST00000577716 CHP1Q99653 195 aa11.87□□□□□ -0.51
RNF43-203ENST00000577716 GINS2Q9Y248 185 aa11.87□□□□□ -0.51
RNF43-203ENST00000577716 TBC1D10BQ4KMP7 808 aaPredicted RBP11.87□□□□□ -0.51
RNF43-203ENST00000577716 CLEC4GQ6UXB4 293 aa11.87□□□□□ -0.51
RNF43-203ENST00000577716 NYAP1Q6ZVC0 841 aa11.87□□□□□ -0.51
RNF43-203ENST00000577716 KRT26Q7Z3Y9 468 aa11.87□□□□□ -0.51
RNF43-203ENST00000577716 APBB1IPQ7Z5R6 666 aaPredicted RBP11.87□□□□□ -0.51
RNF43-203ENST00000577716 MICAL1Q8TDZ2 1067 aa11.87□□□□□ -0.51
RNF43-203ENST00000577716 SH3RF3Q8TEJ3 882 aaPredicted RBP11.87□□□□□ -0.51
RNF43-203ENST00000577716 P3H4Q92791 437 aa11.87□□□□□ -0.51
RNF43-203ENST00000577716 CELF1Q92879 486 aaKnown RBP11.87□□□□□ -0.51
RNF43-203ENST00000577716 BHMT2Q9H2M3 363 aa11.87□□□□□ -0.51
RNF43-203ENST00000577716 TYW1Q9NV66 732 aaKnown RBP11.87□□□□□ -0.51
RNF43-203ENST00000577716 ZNF148Q9UQR1 794 aa11.87□□□□□ -0.51
RNF43-203ENST00000577716 CEP170BQ9Y4F5 1589 aaPredicted RBP11.87□□□□□ -0.51
RNF43-203ENST00000577716 CEMIPQ8WUJ3 1361 aa11.87□□□□□ -0.51
RNF43-203ENST00000577716 MYOM1P52179 1685 aa11.87□□□□□ -0.51
RNF43-203ENST00000577716 CYP19A1P11511 503 aaPredicted RBP11.86□□□□□ -0.51
RNF43-203ENST00000577716 ATF2P15336 505 aa11.86□□□□□ -0.51
RNF43-203ENST00000577716 GGCXP38435 758 aa11.86□□□□□ -0.51
RNF43-203ENST00000577716 FXR1P51114 621 aaKnown RBP eCLIP11.86□□□□□ -0.51
RNF43-203ENST00000577716 CCDC14Q49A88 953 aa11.86□□□□□ -0.51
RNF43-203ENST00000577716 FAM196AQ6ZSG2 479 aa11.86□□□□□ -0.51
RNF43-203ENST00000577716 TC2NQ8N9U0 490 aa11.86□□□□□ -0.51
RNF43-203ENST00000577716 DEPTORQ8TB45 409 aa11.86□□□□□ -0.51
RNF43-203ENST00000577716 SENP2Q9HC62 589 aa11.86□□□□□ -0.51
RNF43-203ENST00000577716 TCP10L2B9ZVM9 353 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms