RNA–Protein interactions for RNA: ENST00000575783.5

CTDNEP1-211, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-211ENST00000575783 WDR19Q8NEZ3 1342 aa19.1■□□□□ 0.65
CTDNEP1-211ENST00000575783 SIP14410 1827 aa19.1■□□□□ 0.65
CTDNEP1-211ENST00000575783 HAS3O00219 553 aa19.1■□□□□ 0.65
CTDNEP1-211ENST00000575783 MBTPS2O43462 519 aa19.1■□□□□ 0.65
CTDNEP1-211ENST00000575783 F2P00734 622 aa19.1■□□□□ 0.65
CTDNEP1-211ENST00000575783 PDHBP11177 359 aa19.1■□□□□ 0.65
CTDNEP1-211ENST00000575783 HNRNPUQ00839 825 aaKnown RBP eCLIP19.1■□□□□ 0.65
CTDNEP1-211ENST00000575783 LAMC2Q13753 1193 aa19.1■□□□□ 0.65
CTDNEP1-211ENST00000575783 PLEKHG4Q58EX7 1191 aa19.1■□□□□ 0.65
CTDNEP1-211ENST00000575783 ZMYM1Q5SVZ6 1142 aa19.1■□□□□ 0.65
CTDNEP1-211ENST00000575783 FSD1Q9BTV5 496 aa19.1■□□□□ 0.65
CTDNEP1-211ENST00000575783 IGFLR1Q9H665 355 aa19.1■□□□□ 0.65
CTDNEP1-211ENST00000575783 STXBP3O00186 592 aa19.09■□□□□ 0.65
CTDNEP1-211ENST00000575783 FOXP2O15409 715 aa19.09■□□□□ 0.65
CTDNEP1-211ENST00000575783 ORC4O43929 436 aa19.09■□□□□ 0.65
CTDNEP1-211ENST00000575783 SORBS3O60504 671 aa19.09■□□□□ 0.65
CTDNEP1-211ENST00000575783 CSPG5O95196 566 aa19.09■□□□□ 0.65
CTDNEP1-211ENST00000575783 ZNF543Q08ER8 600 aa19.09■□□□□ 0.65
CTDNEP1-211ENST00000575783 PPTC7Q8NI37 304 aa19.09■□□□□ 0.65
CTDNEP1-211ENST00000575783 SYTL5Q8TDW5 730 aaPredicted RBP19.09■□□□□ 0.65
CTDNEP1-211ENST00000575783 SEPT8Q92599 483 aa19.09■□□□□ 0.65
CTDNEP1-211ENST00000575783 RMDN3Q96TC7 470 aa19.09■□□□□ 0.65
CTDNEP1-211ENST00000575783 IFIH1Q9BYX4 1025 aaKnown RBP19.09■□□□□ 0.65
CTDNEP1-211ENST00000575783 CHMP4BQ9H444 224 aaKnown RBP19.09■□□□□ 0.65
CTDNEP1-211ENST00000575783 MRVI1Q9Y6F6 885 aa19.09■□□□□ 0.65
CTDNEP1-211ENST00000575783 TMEM221A6NGB7 291 aa19.08■□□□□ 0.64
CTDNEP1-211ENST00000575783 M0R296 226 aa19.08■□□□□ 0.64
CTDNEP1-211ENST00000575783 CTNNB1P35222 781 aa19.08■□□□□ 0.64
CTDNEP1-211ENST00000575783 HYAL1Q12794 435 aa19.08■□□□□ 0.64
CTDNEP1-211ENST00000575783 CTC1Q2NKJ3 1217 aa19.08■□□□□ 0.64
CTDNEP1-211ENST00000575783 SERINC5Q86VE9 423 aa19.08■□□□□ 0.64
CTDNEP1-211ENST00000575783 EMID1Q96A84 441 aaPredicted RBP19.08■□□□□ 0.64
CTDNEP1-211ENST00000575783 IWS1Q96ST2 819 aa19.08■□□□□ 0.64
CTDNEP1-211ENST00000575783 UBA5Q9GZZ9 404 aa19.08■□□□□ 0.64
CTDNEP1-211ENST00000575783 CPVLQ9H3G5 476 aa19.08■□□□□ 0.64
CTDNEP1-211ENST00000575783 COL20A1Q9P218 1284 aa19.08■□□□□ 0.64
CTDNEP1-211ENST00000575783 ANAPC4Q9UJX5 808 aa19.08■□□□□ 0.64
CTDNEP1-211ENST00000575783 ZNF318Q5VUA4 2279 aa19.07■□□□□ 0.64
CTDNEP1-211ENST00000575783 GOLGA8HP0CJ92 632 aa19.07■□□□□ 0.64
CTDNEP1-211ENST00000575783 EIF2AK2P19525 551 aaKnown RBP19.07■□□□□ 0.64
CTDNEP1-211ENST00000575783 VPS53Q5VIR6 699 aa19.07■□□□□ 0.64
CTDNEP1-211ENST00000575783 ARHGEF16Q5VV41 709 aa19.07■□□□□ 0.64
CTDNEP1-211ENST00000575783 TRIM67Q6ZTA4 783 aa19.07■□□□□ 0.64
CTDNEP1-211ENST00000575783 BMP8AQ7Z5Y6 402 aa19.07■□□□□ 0.64
CTDNEP1-211ENST00000575783 SUGP1Q8IWZ8 645 aaKnown RBP19.07■□□□□ 0.64
CTDNEP1-211ENST00000575783 FIBCD1Q8N539 461 aa19.07■□□□□ 0.64
CTDNEP1-211ENST00000575783 IL17RAQ96F46 866 aa19.07■□□□□ 0.64
CTDNEP1-211ENST00000575783 OSBPL7Q9BZF2 842 aa19.07■□□□□ 0.64
CTDNEP1-211ENST00000575783 ZFHX2Q9C0A1 2572 aaPredicted RBP19.07■□□□□ 0.64
CTDNEP1-211ENST00000575783 LOC101059915A0A1B0GWI6 518 aaPredicted RBP19.06■□□□□ 0.64
CTDNEP1-211ENST00000575783 GRM6O15303 877 aa19.06■□□□□ 0.64
CTDNEP1-211ENST00000575783 PPFIA4O75335 1185 aa19.06■□□□□ 0.64
CTDNEP1-211ENST00000575783 EIF3JO75822 258 aaKnown RBP19.06■□□□□ 0.64
CTDNEP1-211ENST00000575783 CTSHP09668 335 aa19.06■□□□□ 0.64
CTDNEP1-211ENST00000575783 GTF2F1P35269 517 aaKnown RBP eCLIP19.06■□□□□ 0.647e-25■□□□□ 11
CTDNEP1-211ENST00000575783 TCF15Q12870 199 aa19.06■□□□□ 0.64
CTDNEP1-211ENST00000575783 SMAD4Q13485 552 aaKnown RBP19.06■□□□□ 0.64
CTDNEP1-211ENST00000575783 ATP6V0A1Q93050 837 aa19.06■□□□□ 0.64
CTDNEP1-211ENST00000575783 PRRX2Q99811 253 aa19.06■□□□□ 0.64
CTDNEP1-211ENST00000575783 FAM86C1Q9NVL1 165 aa19.06■□□□□ 0.64
CTDNEP1-211ENST00000575783 C17orf102A2RUQ5 167 aa19.05■□□□□ 0.64
CTDNEP1-211ENST00000575783 GFRA3O60609 400 aa19.05■□□□□ 0.64
CTDNEP1-211ENST00000575783 SPATA33Q96N06 139 aa19.05■□□□□ 0.64
CTDNEP1-211ENST00000575783 TCP11L1Q9NUJ3 509 aa19.05■□□□□ 0.64
CTDNEP1-211ENST00000575783 CD207Q9UJ71 328 aa19.05■□□□□ 0.64
CTDNEP1-211ENST00000575783 LINC01565O15544 149 aa19.04■□□□□ 0.64
CTDNEP1-211ENST00000575783 TBX10O75333 385 aa19.04■□□□□ 0.64
CTDNEP1-211ENST00000575783 NR3C2P08235 984 aa19.04■□□□□ 0.64
CTDNEP1-211ENST00000575783 FGRP09769 529 aa19.04■□□□□ 0.64
CTDNEP1-211ENST00000575783 BMPR1AP36894 532 aa19.04■□□□□ 0.64
CTDNEP1-211ENST00000575783 PKN1Q16512 942 aa19.04■□□□□ 0.64
CTDNEP1-211ENST00000575783 HSDL1Q3SXM5 330 aa19.04■□□□□ 0.64
CTDNEP1-211ENST00000575783 MCF2L2Q86YR7 1114 aa19.04■□□□□ 0.64
CTDNEP1-211ENST00000575783 C11orf84Q9BUA3 381 aaPredicted RBP19.04■□□□□ 0.64
CTDNEP1-211ENST00000575783 ABCB11O95342 1321 aa19.03■□□□□ 0.64
CTDNEP1-211ENST00000575783 TREHO43280 583 aa19.03■□□□□ 0.64
CTDNEP1-211ENST00000575783 RB1P06400 928 aa19.03■□□□□ 0.64
CTDNEP1-211ENST00000575783 SNHG28P0DPA3 235 aa19.03■□□□□ 0.64
CTDNEP1-211ENST00000575783 CDC37Q16543 378 aaPredicted RBP19.03■□□□□ 0.64
CTDNEP1-211ENST00000575783 MYSM1Q5VVJ2 828 aa19.03■□□□□ 0.64
CTDNEP1-211ENST00000575783 LMAN2LQ9H0V9 348 aa19.03■□□□□ 0.64
CTDNEP1-211ENST00000575783 C5orf67F2Z3F1 127 aa19.02■□□□□ 0.64
CTDNEP1-211ENST00000575783 MYCLP12524 364 aaPredicted RBP19.02■□□□□ 0.64
CTDNEP1-211ENST00000575783 NDUFV1P49821 464 aa19.02■□□□□ 0.64
CTDNEP1-211ENST00000575783 ZXDAP98168 799 aa19.02■□□□□ 0.64
CTDNEP1-211ENST00000575783 CELF3Q5SZQ8 465 aaKnown RBP19.02■□□□□ 0.64
CTDNEP1-211ENST00000575783 GPATCH4Q5T3I0 446 aaKnown RBP19.02■□□□□ 0.64
CTDNEP1-211ENST00000575783 FBXL6Q8N531 539 aa19.02■□□□□ 0.64
CTDNEP1-211ENST00000575783 TTC14Q96N46 770 aa19.02■□□□□ 0.64
CTDNEP1-211ENST00000575783 C16orf70Q9BSU1 422 aa19.02■□□□□ 0.64
CTDNEP1-211ENST00000575783 DCTPP1Q9H773 170 aa19.02■□□□□ 0.64
CTDNEP1-211ENST00000575783 PXMP2Q9NR77 195 aa19.02■□□□□ 0.64
CTDNEP1-211ENST00000575783 TECTAO75443 2155 aa19.02■□□□□ 0.63
CTDNEP1-211ENST00000575783 MYO7AQ13402 2215 aa19.01■□□□□ 0.63
CTDNEP1-211ENST00000575783 MYO15AQ9UKN7 3530 aa19.01■□□□□ 0.63
CTDNEP1-211ENST00000575783 GGPS1O95749 300 aa19.01■□□□□ 0.63
CTDNEP1-211ENST00000575783 SMIM10L2AP0DMW4 78 aa19.01■□□□□ 0.63
CTDNEP1-211ENST00000575783 SMIM10L2BP0DMW5 78 aa19.01■□□□□ 0.63
CTDNEP1-211ENST00000575783 HOXD8P13378 290 aaPredicted RBP19.01■□□□□ 0.63
CTDNEP1-211ENST00000575783 ADAM15Q13444 863 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms