RNA–Protein interactions for RNA: ENST00000571558.5

RPAIN-209, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,423 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-209ENST00000571558 RABGGTBP53611 331 aa15.82■□□□□ 0.12
RPAIN-209ENST00000571558 CCL23P55773 120 aa15.82■□□□□ 0.12
RPAIN-209ENST00000571558 HMGN5P82970 282 aaKnown RBP15.82■□□□□ 0.12
RPAIN-209ENST00000571558 BEX3Q00994 111 aa15.82■□□□□ 0.12
RPAIN-209ENST00000571558 CCDC96Q2M329 555 aa15.82■□□□□ 0.12
RPAIN-209ENST00000571558 IQSEC1Q6DN90 963 aa15.82■□□□□ 0.12
RPAIN-209ENST00000571558 TLK2Q86UE8 772 aa15.82■□□□□ 0.12
RPAIN-209ENST00000571558 CCDC82Q8N4S0 544 aa15.82■□□□□ 0.12
RPAIN-209ENST00000571558 PHOSPHO2Q8TCD6 241 aa15.82■□□□□ 0.12
RPAIN-209ENST00000571558 RNF26Q9BY78 433 aaPredicted RBP15.82■□□□□ 0.12
RPAIN-209ENST00000571558 UBA5Q9GZZ9 404 aa15.82■□□□□ 0.12
RPAIN-209ENST00000571558 WNT8AQ9H1J5 351 aa15.82■□□□□ 0.12
RPAIN-209ENST00000571558 RIOX1Q9H6W3 641 aa15.82■□□□□ 0.12
RPAIN-209ENST00000571558 RAVER2Q9HCJ3 691 aaKnown RBP15.82■□□□□ 0.12
RPAIN-209ENST00000571558 GRIN2DO15399 1336 aa15.82■□□□□ 0.12
RPAIN-209ENST00000571558 UMODL1Q5DID0 1318 aa15.82■□□□□ 0.12
RPAIN-209ENST00000571558 PRPF3O43395 683 aaKnown RBP15.81■□□□□ 0.12
RPAIN-209ENST00000571558 B4GALT4O60513 344 aa15.81■□□□□ 0.12
RPAIN-209ENST00000571558 GPR37L1O60883 481 aa15.81■□□□□ 0.12
RPAIN-209ENST00000571558 KCNQ1P51787 676 aa15.81■□□□□ 0.12
RPAIN-209ENST00000571558 MICALL1Q8N3F8 863 aa15.81■□□□□ 0.12
RPAIN-209ENST00000571558 KIFC2Q96AC6 838 aa15.81■□□□□ 0.12
RPAIN-209ENST00000571558 MTMR8Q96EF0 704 aa15.81■□□□□ 0.12
RPAIN-209ENST00000571558 SLC26A6Q9BXS9 759 aa15.81■□□□□ 0.12
RPAIN-209ENST00000571558 ACAD9Q9H845 621 aa15.81■□□□□ 0.12
RPAIN-209ENST00000571558 ASTN1O14525 1302 aa15.81■□□□□ 0.12
RPAIN-209ENST00000571558 ZBBXA8MT70 800 aa15.8■□□□□ 0.12
RPAIN-209ENST00000571558 TMEM232C9JQI7 657 aa15.8■□□□□ 0.12
RPAIN-209ENST00000571558 TLL1O43897 1013 aa15.8■□□□□ 0.12
RPAIN-209ENST00000571558 ACTN1P12814 892 aa15.8■□□□□ 0.12
RPAIN-209ENST00000571558 SLC16A2P36021 539 aa15.8■□□□□ 0.12
RPAIN-209ENST00000571558 SSRP1Q08945 709 aaKnown RBP15.8■□□□□ 0.12
RPAIN-209ENST00000571558 PKN1Q16512 942 aa15.8■□□□□ 0.12
RPAIN-209ENST00000571558 TKFCQ3LXA3 575 aa15.8■□□□□ 0.12
RPAIN-209ENST00000571558 ADGRF4Q8IZF3 695 aa15.8■□□□□ 0.12
RPAIN-209ENST00000571558 AGBL1Q96MI9 1066 aa15.8■□□□□ 0.12
RPAIN-209ENST00000571558 SLC9A7Q96T83 725 aa15.8■□□□□ 0.12
RPAIN-209ENST00000571558 TRPV6Q9H1D0 765 aa15.8■□□□□ 0.12
RPAIN-209ENST00000571558 JMJD4Q9H9V9 463 aa15.8■□□□□ 0.12
RPAIN-209ENST00000571558 ORC3Q9UBD5 711 aaPredicted RBP15.8■□□□□ 0.12
RPAIN-209ENST00000571558 V9GY48 417 aaPredicted RBP15.8■□□□□ 0.12
RPAIN-209ENST00000571558 DYNC1LI2O43237 492 aaPredicted RBP15.79■□□□□ 0.12
RPAIN-209ENST00000571558 MYOGP15173 224 aa15.79■□□□□ 0.12
RPAIN-209ENST00000571558 RFC2P35250 354 aa15.79■□□□□ 0.12
RPAIN-209ENST00000571558 STAT2P52630 851 aa15.79■□□□□ 0.12
RPAIN-209ENST00000571558 CNTN2Q02246 1040 aa15.79■□□□□ 0.12
RPAIN-209ENST00000571558 TRIM22Q8IYM9 498 aa15.79■□□□□ 0.12
RPAIN-209ENST00000571558 HLA-CQ95604 372 aa15.79■□□□□ 0.12
RPAIN-209ENST00000571558 AIFM3Q96NN9 605 aa15.79■□□□□ 0.12
RPAIN-209ENST00000571558 EPHX3Q9H6B9 360 aa15.79■□□□□ 0.12
RPAIN-209ENST00000571558 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.78■□□□□ 0.12
RPAIN-209ENST00000571558 hCG_1642624A0A1W2PR95 340 aa15.78■□□□□ 0.12
RPAIN-209ENST00000571558 KIF28PB7ZC32 967 aa15.78■□□□□ 0.12
RPAIN-209ENST00000571558 DEXIO95424 95 aa15.78■□□□□ 0.12
RPAIN-209ENST00000571558 CA3P07451 260 aa15.78■□□□□ 0.12
RPAIN-209ENST00000571558 SYDE2Q5VT97 1194 aa15.78■□□□□ 0.12
RPAIN-209ENST00000571558 FAM160B2Q86V87 743 aa15.78■□□□□ 0.12
RPAIN-209ENST00000571558 CHURC1Q8WUH1 139 aa15.78■□□□□ 0.12
RPAIN-209ENST00000571558 VWCEQ96DN2 955 aa15.78■□□□□ 0.12
RPAIN-209ENST00000571558 A1CFQ9NQ94 594 aaKnown RBP15.78■□□□□ 0.12
RPAIN-209ENST00000571558 GBF1Q92538 1859 aa15.78■□□□□ 0.12
RPAIN-209ENST00000571558 LOC102724159A0A0B4J2E5 919 aa15.77■□□□□ 0.12
RPAIN-209ENST00000571558 SMPD1P17405 629 aa15.77■□□□□ 0.12
RPAIN-209ENST00000571558 PWP2Q15269 919 aaKnown RBP15.77■□□□□ 0.12
RPAIN-209ENST00000571558 PFKFB3Q16875 520 aaPredicted RBP15.77■□□□□ 0.12
RPAIN-209ENST00000571558 PIGSQ96S52 555 aa15.77■□□□□ 0.12
RPAIN-209ENST00000571558 VTA1Q9NP79 307 aa15.77■□□□□ 0.12
RPAIN-209ENST00000571558 POLR3EQ9NVU0 708 aa15.77■□□□□ 0.12
RPAIN-209ENST00000571558 LMCD1Q9NZU5 365 aa15.77■□□□□ 0.12
RPAIN-209ENST00000571558 PRR12Q9ULL5 1215 aa15.77■□□□□ 0.12
RPAIN-209ENST00000571558 TCF20Q9UGU0 1960 aaKnown RBP15.77■□□□□ 0.11
RPAIN-209ENST00000571558 SOWAHBA6NEL2 793 aa15.77■□□□□ 0.11
RPAIN-209ENST00000571558 PITPNM1O00562 1244 aa15.77■□□□□ 0.11
RPAIN-209ENST00000571558 SYT1P21579 422 aa15.77■□□□□ 0.11
RPAIN-209ENST00000571558 TTLL4Q14679 1199 aa15.77■□□□□ 0.11
RPAIN-209ENST00000571558 TAPT1Q6NXT6 567 aa15.77■□□□□ 0.11
RPAIN-209ENST00000571558 FAM184AQ8NB25 1140 aa15.77■□□□□ 0.11
RPAIN-209ENST00000571558 RRP36Q96EU6 259 aaKnown RBP15.77■□□□□ 0.11
RPAIN-209ENST00000571558 SCLYQ96I15 445 aa15.77■□□□□ 0.11
RPAIN-209ENST00000571558 ALG1Q9BT22 464 aa15.77■□□□□ 0.11
RPAIN-209ENST00000571558 VAT1LQ9HCJ6 419 aa15.77■□□□□ 0.11
RPAIN-209ENST00000571558 HOMER2Q9NSB8 354 aa15.77■□□□□ 0.11
RPAIN-209ENST00000571558 RNF146Q9NTX7 359 aa15.77■□□□□ 0.11
RPAIN-209ENST00000571558 ISY1Q9ULR0 285 aaKnown RBP15.77■□□□□ 0.11
RPAIN-209ENST00000571558 PRRC2BQ5JSZ5 2229 aaKnown RBP15.76■□□□□ 0.11
RPAIN-209ENST00000571558 PNMA6FA0A0J9YX94 578 aa15.76■□□□□ 0.11
RPAIN-209ENST00000571558 ZBTB5O15062 677 aa15.76■□□□□ 0.11
RPAIN-209ENST00000571558 PPP1R11O60927 126 aaPredicted RBP15.76■□□□□ 0.11
RPAIN-209ENST00000571558 SCG2P13521 617 aa15.76■□□□□ 0.11
RPAIN-209ENST00000571558 AKAP17AQ02040 695 aaKnown RBP15.76■□□□□ 0.11
RPAIN-209ENST00000571558 PKP1Q13835 747 aa15.76■□□□□ 0.11
RPAIN-209ENST00000571558 DUSP28Q4G0W2 176 aa15.76■□□□□ 0.11
RPAIN-209ENST00000571558 RGS22Q8NE09 1264 aa15.76■□□□□ 0.11
RPAIN-209ENST00000571558 MORC4Q8TE76 937 aa15.76■□□□□ 0.11
RPAIN-209ENST00000571558 PIBF1Q8WXW3 757 aa15.76■□□□□ 0.11
RPAIN-209ENST00000571558 WASF1Q92558 559 aa15.76■□□□□ 0.11
RPAIN-209ENST00000571558 RANBP17Q9H2T7 1088 aaKnown RBP15.76■□□□□ 0.11
RPAIN-209ENST00000571558 CIZ1Q9ULV3 898 aaPredicted RBP15.76■□□□□ 0.11
RPAIN-209ENST00000571558 KIF3AQ9Y496 699 aa15.76■□□□□ 0.11
RPAIN-209ENST00000571558 MCM3APO60318 1980 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms