RNA–Protein interactions for RNA: ENST00000571043.5

RPAIN-208, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,547 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-208ENST00000571043 LBX2Q6XYB7 198 aa19.45■□□□□ 0.7
RPAIN-208ENST00000571043 KIAA1524Q8TCG1 905 aa19.45■□□□□ 0.7
RPAIN-208ENST00000571043 ATG4CQ96DT6 458 aa19.45■□□□□ 0.7
RPAIN-208ENST00000571043 MED15Q96RN5 788 aa19.45■□□□□ 0.7
RPAIN-208ENST00000571043 GTPBP4Q9BZE4 634 aaKnown RBP19.45■□□□□ 0.7
RPAIN-208ENST00000571043 ZCCHC17Q9NP64 241 aaKnown RBP19.45■□□□□ 0.7
RPAIN-208ENST00000571043 STK17AQ9UEE5 414 aa19.45■□□□□ 0.7
RPAIN-208ENST00000571043 PNMA3Q9UL41 463 aa19.45■□□□□ 0.7
RPAIN-208ENST00000571043 HTRA3P83110 453 aa19.44■□□□□ 0.7
RPAIN-208ENST00000571043 AMPD3Q01432 767 aa19.44■□□□□ 0.7
RPAIN-208ENST00000571043 GRM1Q13255 1194 aa19.44■□□□□ 0.7
RPAIN-208ENST00000571043 REM2Q8IYK8 340 aaPredicted RBP19.44■□□□□ 0.7
RPAIN-208ENST00000571043 HAS1Q92839 578 aa19.44■□□□□ 0.7
RPAIN-208ENST00000571043 C7orf25Q9BPX7 421 aa19.44■□□□□ 0.7
RPAIN-208ENST00000571043 SPDYE3A6NKU9 549 aa19.43■□□□□ 0.7
RPAIN-208ENST00000571043 IGF2BP3O00425 579 aaKnown RBP eCLIP19.43■□□□□ 0.7
RPAIN-208ENST00000571043 OFD1O75665 1012 aa19.43■□□□□ 0.7
RPAIN-208ENST00000571043 HSPA6P17066 643 aa19.43■□□□□ 0.7
RPAIN-208ENST00000571043 HERVK_113P62684 666 aa19.43■□□□□ 0.7
RPAIN-208ENST00000571043 USH1GQ495M9 461 aa19.43■□□□□ 0.7
RPAIN-208ENST00000571043 POTEEQ6S8J3 1075 aa19.43■□□□□ 0.7
RPAIN-208ENST00000571043 SAMD1Q6SPF0 538 aaPredicted RBP19.43■□□□□ 0.7
RPAIN-208ENST00000571043 IFNL1Q8IU54 200 aa19.43■□□□□ 0.7
RPAIN-208ENST00000571043 LRRC8AQ8IWT6 810 aa19.43■□□□□ 0.7
RPAIN-208ENST00000571043 LRRC15Q8TF66 581 aa19.43■□□□□ 0.7
RPAIN-208ENST00000571043 CACTINQ8WUQ7 758 aaKnown RBP19.43■□□□□ 0.7
RPAIN-208ENST00000571043 SPTLC3Q9NUV7 552 aa19.43■□□□□ 0.7
RPAIN-208ENST00000571043 PYCARDQ9ULZ3 195 aa19.43■□□□□ 0.7
RPAIN-208ENST00000571043 KLRC4O43908 158 aa19.42■□□□□ 0.7
RPAIN-208ENST00000571043 AOC2O75106 756 aa19.42■□□□□ 0.7
RPAIN-208ENST00000571043 ZBED4O75132 1171 aa19.42■□□□□ 0.7
RPAIN-208ENST00000571043 RHOBTB3O94955 611 aa19.42■□□□□ 0.7
RPAIN-208ENST00000571043 MAP2K2P36507 400 aa19.42■□□□□ 0.7
RPAIN-208ENST00000571043 SREBF1P36956 1147 aa19.42■□□□□ 0.7
RPAIN-208ENST00000571043 ARHGAP4P98171 946 aa19.42■□□□□ 0.7
RPAIN-208ENST00000571043 GRB10Q13322 594 aa19.42■□□□□ 0.7
RPAIN-208ENST00000571043 NOLC1Q14978 699 aaKnown RBP eCLIP19.42■□□□□ 0.7
RPAIN-208ENST00000571043 KRT79Q5XKE5 535 aa19.42■□□□□ 0.7
RPAIN-208ENST00000571043 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.42■□□□□ 0.7
RPAIN-208ENST00000571043 FILIP1Q7Z7B0 1213 aa19.42■□□□□ 0.7
RPAIN-208ENST00000571043 TRMT44Q8IYL2 757 aaKnown RBP19.42■□□□□ 0.7
RPAIN-208ENST00000571043 MB21D1Q8N884 522 aa19.42■□□□□ 0.7
RPAIN-208ENST00000571043 REPS2Q8NFH8 660 aa19.42■□□□□ 0.7
RPAIN-208ENST00000571043 CCDC47Q96A33 483 aaKnown RBP19.42■□□□□ 0.7
RPAIN-208ENST00000571043 PLIN2Q99541 437 aa19.42■□□□□ 0.7
RPAIN-208ENST00000571043 KCNMB3Q9NPA1 279 aa19.42■□□□□ 0.7
RPAIN-208ENST00000571043 RWDD2AQ9UIY3 292 aa19.42■□□□□ 0.7
RPAIN-208ENST00000571043 PCNTO95613 3336 aa19.42■□□□□ 0.7
RPAIN-208ENST00000571043 SYNRGQ9UMZ2 1314 aa19.42■□□□□ 0.7
RPAIN-208ENST00000571043 OPLAHO14841 1288 aa19.41■□□□□ 0.7
RPAIN-208ENST00000571043 TBX3O15119 743 aa19.41■□□□□ 0.7
RPAIN-208ENST00000571043 MARCH6O60337 910 aa19.41■□□□□ 0.7
RPAIN-208ENST00000571043 CDK11BP21127 795 aaKnown RBP19.41■□□□□ 0.7
RPAIN-208ENST00000571043 CIITAP33076 1130 aa19.41■□□□□ 0.7
RPAIN-208ENST00000571043 VEGFBP49765 207 aa19.41■□□□□ 0.7
RPAIN-208ENST00000571043 Q4G0T1 1027 aa19.41■□□□□ 0.7
RPAIN-208ENST00000571043 SLFN12Q8IYM2 578 aa19.41■□□□□ 0.7
RPAIN-208ENST00000571043 PNMA5Q96PV4 448 aa19.41■□□□□ 0.7
RPAIN-208ENST00000571043 TRIM9Q9C026 710 aa19.41■□□□□ 0.7
RPAIN-208ENST00000571043 ZNF536O15090 1300 aa19.41■□□□□ 0.7
RPAIN-208ENST00000571043 ATP2A1O14983 1001 aa19.41■□□□□ 0.7
RPAIN-208ENST00000571043 CYP3A4P08684 503 aa19.41■□□□□ 0.7
RPAIN-208ENST00000571043 CYP2C8P10632 490 aa19.41■□□□□ 0.7
RPAIN-208ENST00000571043 OAZ1P54368 228 aa19.41■□□□□ 0.7
RPAIN-208ENST00000571043 KMT5BQ4FZB7 885 aa19.41■□□□□ 0.7
RPAIN-208ENST00000571043 TMEM119Q4V9L6 283 aa19.41■□□□□ 0.7
RPAIN-208ENST00000571043 KLHL10Q6JEL2 608 aa19.41■□□□□ 0.7
RPAIN-208ENST00000571043 TMC6Q7Z403 805 aa19.41■□□□□ 0.7
RPAIN-208ENST00000571043 CCDC150Q8NCX0 1101 aa19.41■□□□□ 0.7
RPAIN-208ENST00000571043 SNX29Q8TEQ0 813 aa19.41■□□□□ 0.7
RPAIN-208ENST00000571043 GTF3C2Q8WUA4 911 aaPredicted RBP19.41■□□□□ 0.7
RPAIN-208ENST00000571043 CDK5RAP3Q96JB5 506 aa19.41■□□□□ 0.7
RPAIN-208ENST00000571043 LRRC27Q9C0I9 530 aa19.41■□□□□ 0.7
RPAIN-208ENST00000571043 PNMA2Q9UL42 364 aa19.41■□□□□ 0.7
RPAIN-208ENST00000571043 ZNF214Q9UL59 606 aaPredicted RBP19.41■□□□□ 0.7
RPAIN-208ENST00000571043 PCDHA12Q9UN75 941 aa19.41■□□□□ 0.7
RPAIN-208ENST00000571043 MRPL11Q9Y3B7 192 aaKnown RBP19.41■□□□□ 0.7
RPAIN-208ENST00000571043 ICAM1P05362 532 aa19.4■□□□□ 0.7
RPAIN-208ENST00000571043 LRMPQ12912 555 aa19.4■□□□□ 0.7
RPAIN-208ENST00000571043 PAK1Q13153 545 aa19.4■□□□□ 0.7
RPAIN-208ENST00000571043 TMEM132BQ14DG7 1078 aa19.4■□□□□ 0.7
RPAIN-208ENST00000571043 HYIQ5T013 277 aa19.4■□□□□ 0.7
RPAIN-208ENST00000571043 CDKAL1Q5VV42 579 aa19.4■□□□□ 0.7
RPAIN-208ENST00000571043 CCDC174Q6PII3 467 aa19.4■□□□□ 0.7
RPAIN-208ENST00000571043 SV2BQ7L1I2 683 aa19.4■□□□□ 0.7
RPAIN-208ENST00000571043 SMYD4Q8IYR2 804 aaPredicted RBP19.4■□□□□ 0.7
RPAIN-208ENST00000571043 NAP1L5Q96NT1 182 aaPredicted RBP19.4■□□□□ 0.7
RPAIN-208ENST00000571043 PARK7Q99497 189 aaKnown RBP19.4■□□□□ 0.7
RPAIN-208ENST00000571043 SAMSN1Q9NSI8 373 aaKnown RBP19.4■□□□□ 0.7
RPAIN-208ENST00000571043 RBPJLQ9UBG7 517 aa19.4■□□□□ 0.7
RPAIN-208ENST00000571043 RABGAP1Q9Y3P9 1069 aa19.4■□□□□ 0.7
RPAIN-208ENST00000571043 CTDP1Q9Y5B0 961 aaPredicted RBP19.4■□□□□ 0.7
RPAIN-208ENST00000571043 A0A0G2JMZ2 1700 aa19.39■□□□□ 0.69
RPAIN-208ENST00000571043 ABCB11O95342 1321 aa19.39■□□□□ 0.69
RPAIN-208ENST00000571043 KDM3AQ9Y4C1 1321 aa19.39■□□□□ 0.69
RPAIN-208ENST00000571043 POTEMA6NI47 508 aa19.39■□□□□ 0.69
RPAIN-208ENST00000571043 PPP1R2P41236 205 aa19.39■□□□□ 0.69
RPAIN-208ENST00000571043 CNNM4Q6P4Q7 775 aa19.39■□□□□ 0.69
RPAIN-208ENST00000571043 VSTM4Q8IW00 320 aa19.39■□□□□ 0.69
RPAIN-208ENST00000571043 ADSSL1Q8N142 457 aa19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms