RNA–Protein interactions for RNA: ENST00000569827.5

CAPN3-220, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-220ENST00000569827 GJB5O95377 273 aa14.07□□□□□ -0.16
CAPN3-220ENST00000569827 F2P00734 622 aa14.07□□□□□ -0.16
CAPN3-220ENST00000569827 CXCL10P02778 98 aa14.07□□□□□ -0.16
CAPN3-220ENST00000569827 PCP11498 1178 aaKnown RBP14.07□□□□□ -0.16
CAPN3-220ENST00000569827 ASPRV1Q53RT3 343 aa14.07□□□□□ -0.16
CAPN3-220ENST00000569827 HOMER1Q86YM7 354 aa14.07□□□□□ -0.16
CAPN3-220ENST00000569827 PLEKHM2Q8IWE5 1019 aa14.07□□□□□ -0.16
CAPN3-220ENST00000569827 DHX37Q8IY37 1157 aaKnown RBP14.07□□□□□ -0.16
CAPN3-220ENST00000569827 FAM122AQ96E09 287 aa14.07□□□□□ -0.16
CAPN3-220ENST00000569827 C17orf80Q9BSJ5 609 aa14.07□□□□□ -0.16
CAPN3-220ENST00000569827 COG5Q9UP83 839 aa14.07□□□□□ -0.16
CAPN3-220ENST00000569827 MRPL11Q9Y3B7 192 aaKnown RBP14.07□□□□□ -0.16
CAPN3-220ENST00000569827 TRIOO75962 3097 aa14.07□□□□□ -0.16
CAPN3-220ENST00000569827 HAS3O00219 553 aa14.06□□□□□ -0.16
CAPN3-220ENST00000569827 GGPS1O95749 300 aa14.06□□□□□ -0.16
CAPN3-220ENST00000569827 CTSHP09668 335 aa14.06□□□□□ -0.16
CAPN3-220ENST00000569827 SP2Q02086 613 aa14.06□□□□□ -0.16
CAPN3-220ENST00000569827 SLC35G1Q2M3R5 365 aa14.06□□□□□ -0.16
CAPN3-220ENST00000569827 HSDL1Q3SXM5 330 aa14.06□□□□□ -0.16
CAPN3-220ENST00000569827 CYB5R4Q7L1T6 521 aa14.06□□□□□ -0.16
CAPN3-220ENST00000569827 MCF2L2Q86YR7 1114 aa14.06□□□□□ -0.16
CAPN3-220ENST00000569827 MYOCDQ8IZQ8 938 aa14.06□□□□□ -0.16
CAPN3-220ENST00000569827 IWS1Q96ST2 819 aa14.06□□□□□ -0.16
CAPN3-220ENST00000569827 C1QTNF1Q9BXJ1 281 aa14.06□□□□□ -0.16
CAPN3-220ENST00000569827 C11orf16Q9NQ32 467 aa14.06□□□□□ -0.16
CAPN3-220ENST00000569827 DIAPH3Q9NSV4 1193 aa14.06□□□□□ -0.16
CAPN3-220ENST00000569827 TELO2Q9Y4R8 837 aa14.06□□□□□ -0.16
CAPN3-220ENST00000569827 EIF3JO75822 258 aaKnown RBP14.05□□□□□ -0.16
CAPN3-220ENST00000569827 UBA1P22314 1058 aaKnown RBP14.05□□□□□ -0.16
CAPN3-220ENST00000569827 THPOP40225 353 aa14.05□□□□□ -0.16
CAPN3-220ENST00000569827 HSD17B4P51659 736 aa14.05□□□□□ -0.16
CAPN3-220ENST00000569827 MFAP1P55081 439 aaKnown RBP14.05□□□□□ -0.16
CAPN3-220ENST00000569827 RBL2Q08999 1139 aa14.05□□□□□ -0.16
CAPN3-220ENST00000569827 MYSM1Q5VVJ2 828 aa14.05□□□□□ -0.16
CAPN3-220ENST00000569827 FCHSD1Q86WN1 690 aa14.05□□□□□ -0.16
CAPN3-220ENST00000569827 PPTC7Q8NI37 304 aa14.05□□□□□ -0.16
CAPN3-220ENST00000569827 PIBF1Q8WXW3 757 aa14.05□□□□□ -0.16
CAPN3-220ENST00000569827 ANKS1AQ92625 1134 aa14.05□□□□□ -0.16
CAPN3-220ENST00000569827 SPATA33Q96N06 139 aa14.05□□□□□ -0.16
CAPN3-220ENST00000569827 TGS1Q96RS0 853 aaKnown RBP14.05□□□□□ -0.16
CAPN3-220ENST00000569827 RAD9AQ99638 391 aa14.05□□□□□ -0.16
CAPN3-220ENST00000569827 PDCD2LQ9BRP1 358 aa14.05□□□□□ -0.16
CAPN3-220ENST00000569827 KATNAL1Q9BW62 490 aa14.05□□□□□ -0.16
CAPN3-220ENST00000569827 SENP2Q9HC62 589 aa14.05□□□□□ -0.16
CAPN3-220ENST00000569827 ABHD14A-ACY1A0A1B0GW23 586 aa14.04□□□□□ -0.16
CAPN3-220ENST00000569827 LGR5O75473 907 aa14.04□□□□□ -0.16
CAPN3-220ENST00000569827 IGHDP01880 384 aa14.04□□□□□ -0.16
CAPN3-220ENST00000569827 IL9P15248 144 aa14.04□□□□□ -0.16
CAPN3-220ENST00000569827 KCNA5P22460 613 aa14.04□□□□□ -0.16
CAPN3-220ENST00000569827 ERVK-21P61565 698 aa14.04□□□□□ -0.16
CAPN3-220ENST00000569827 PTK7Q13308 1070 aa14.04□□□□□ -0.16
CAPN3-220ENST00000569827 LAMC2Q13753 1193 aa14.04□□□□□ -0.16
CAPN3-220ENST00000569827 IKBKEQ14164 716 aa14.04□□□□□ -0.16
CAPN3-220ENST00000569827 PGM5Q15124 567 aa14.04□□□□□ -0.16
CAPN3-220ENST00000569827 IFIT1BQ5T764 474 aaKnown RBP14.04□□□□□ -0.16
CAPN3-220ENST00000569827 CHD1LQ86WJ1 897 aa14.04□□□□□ -0.16
CAPN3-220ENST00000569827 DBF4BQ8NFT6 615 aa14.04□□□□□ -0.16
CAPN3-220ENST00000569827 EMID1Q96A84 441 aaPredicted RBP14.04□□□□□ -0.16
CAPN3-220ENST00000569827 UBAC1Q9BSL1 405 aa14.04□□□□□ -0.16
CAPN3-220ENST00000569827 AMNQ9BXJ7 453 aa14.04□□□□□ -0.16
CAPN3-220ENST00000569827 UBE2ZQ9H832 354 aaPredicted RBP14.04□□□□□ -0.16
CAPN3-220ENST00000569827 MAD2L2Q9UI95 211 aa14.04□□□□□ -0.16
CAPN3-220ENST00000569827 KLRF2D3W0D1 207 aa14.03□□□□□ -0.16
CAPN3-220ENST00000569827 UPP2O95045 317 aa14.03□□□□□ -0.16
CAPN3-220ENST00000569827 CSPG5O95196 566 aa14.03□□□□□ -0.16
CAPN3-220ENST00000569827 IMMTQ16891 758 aaKnown RBP14.03□□□□□ -0.16
CAPN3-220ENST00000569827 CELF3Q5SZQ8 465 aaKnown RBP14.03□□□□□ -0.16
CAPN3-220ENST00000569827 TRIM50Q86XT4 487 aa14.03□□□□□ -0.16
CAPN3-220ENST00000569827 SMC5Q8IY18 1101 aa14.03□□□□□ -0.16
CAPN3-220ENST00000569827 FBXO22Q8NEZ5 403 aa14.03□□□□□ -0.16
CAPN3-220ENST00000569827 PIGSQ96S52 555 aa14.03□□□□□ -0.16
CAPN3-220ENST00000569827 C16orf70Q9BSU1 422 aa14.03□□□□□ -0.16
CAPN3-220ENST00000569827 SUPT16HQ9Y5B9 1047 aaKnown RBP14.03□□□□□ -0.16
CAPN3-220ENST00000569827 PCDHA1Q9Y5I3 950 aa14.03□□□□□ -0.16
CAPN3-220ENST00000569827 EVPLQ92817 2033 aa14.02□□□□□ -0.16
CAPN3-220ENST00000569827 RSPH10B2B2RC85 870 aa14.02□□□□□ -0.17
CAPN3-220ENST00000569827 TREHO43280 583 aa14.02□□□□□ -0.17
CAPN3-220ENST00000569827 RSPH10BP0C881 870 aa14.02□□□□□ -0.17
CAPN3-220ENST00000569827 SMIM10L2AP0DMW4 78 aa14.02□□□□□ -0.17
CAPN3-220ENST00000569827 SMIM10L2BP0DMW5 78 aa14.02□□□□□ -0.17
CAPN3-220ENST00000569827 HOXD8P13378 290 aaPredicted RBP14.02□□□□□ -0.17
CAPN3-220ENST00000569827 SP4Q02446 784 aa14.02□□□□□ -0.17
CAPN3-220ENST00000569827 SEC23AQ15436 765 aa14.02□□□□□ -0.17
CAPN3-220ENST00000569827 CCDC178Q5BJE1 867 aa14.02□□□□□ -0.17
CAPN3-220ENST00000569827 TMEM31Q5JXX7 168 aa14.02□□□□□ -0.17
CAPN3-220ENST00000569827 SERINC5Q86VE9 423 aa14.02□□□□□ -0.17
CAPN3-220ENST00000569827 ATP6V0A1Q93050 837 aa14.02□□□□□ -0.17
CAPN3-220ENST00000569827 DSCC1Q9BVC3 393 aa14.02□□□□□ -0.17
CAPN3-220ENST00000569827 TAF6LQ9Y6J9 622 aa14.02□□□□□ -0.17
CAPN3-220ENST00000569827 H3BQ06 376 aaPredicted RBP14.01□□□□□ -0.17
CAPN3-220ENST00000569827 ZBTB5O15062 677 aa14.01□□□□□ -0.17
CAPN3-220ENST00000569827 LGALS2P05162 132 aa14.01□□□□□ -0.17
CAPN3-220ENST00000569827 MKRN4PQ13434 485 aaPredicted RBP14.01□□□□□ -0.17
CAPN3-220ENST00000569827 EP400NLQ6ZTU2 488 aa14.01□□□□□ -0.17
CAPN3-220ENST00000569827 STOX1Q6ZVD7 989 aa14.01□□□□□ -0.17
CAPN3-220ENST00000569827 VSIG10LQ86VR7 867 aa14.01□□□□□ -0.17
CAPN3-220ENST00000569827 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.01□□□□□ -0.17
CAPN3-220ENST00000569827 MTMR8Q96EF0 704 aa14.01□□□□□ -0.17
CAPN3-220ENST00000569827 KRT23Q9C075 422 aa14.01□□□□□ -0.17
CAPN3-220ENST00000569827 MLXIPQ9HAP2 919 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms