RNA–Protein interactions for RNA: ENST00000569429.5

HERPUD1-217, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 562 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-217ENST00000569429 TBC1D8BQ0IIM8 1120 aa8.01□□□□□ -1.13
HERPUD1-217ENST00000569429 KCNC3Q14003 757 aa8.01□□□□□ -1.13
HERPUD1-217ENST00000569429 ANKRD54Q6NXT1 300 aa8.01□□□□□ -1.13
HERPUD1-217ENST00000569429 SYCE2Q6PIF2 218 aa8.01□□□□□ -1.13
HERPUD1-217ENST00000569429 DDX1Q92499 740 aaKnown RBP8.01□□□□□ -1.13
HERPUD1-217ENST00000569429 CCDC17Q96LX7 622 aa8.01□□□□□ -1.13
HERPUD1-217ENST00000569429 NECTIN4Q96NY8 510 aa8.01□□□□□ -1.13
HERPUD1-217ENST00000569429 ACAD9Q9H845 621 aa8.01□□□□□ -1.13
HERPUD1-217ENST00000569429 ERVK-5Q9HDB9 667 aa8.01□□□□□ -1.13
HERPUD1-217ENST00000569429 TSHZ2Q9NRE2 1034 aa8.01□□□□□ -1.13
HERPUD1-217ENST00000569429 PA2G4Q9UQ80 394 aaKnown RBP8.01□□□□□ -1.13
HERPUD1-217ENST00000569429 CTDP1Q9Y5B0 961 aaPredicted RBP8.01□□□□□ -1.13
HERPUD1-217ENST00000569429 COL4A3Q01955 1670 aa8.01□□□□□ -1.13
HERPUD1-217ENST00000569429 KIAA1217Q5T5P2 1943 aa8.01□□□□□ -1.13
HERPUD1-217ENST00000569429 AKAP13Q12802 2813 aa8.01□□□□□ -1.13
HERPUD1-217ENST00000569429 PATJQ8NI35 1801 aa8.01□□□□□ -1.13
HERPUD1-217ENST00000569429 RBAK-RBAKDNI3L0D1 243 aa8□□□□□ -1.13
HERPUD1-217ENST00000569429 SRGAP2BP0DMP2 458 aa8□□□□□ -1.13
HERPUD1-217ENST00000569429 ATXN8OSP0DMR3 200 aa8□□□□□ -1.13
HERPUD1-217ENST00000569429 HOXB8P17481 243 aaPredicted RBP8□□□□□ -1.13
HERPUD1-217ENST00000569429 CYP7A1P22680 504 aa8□□□□□ -1.13
HERPUD1-217ENST00000569429 RBM10P98175 930 aaKnown RBP8□□□□□ -1.13
HERPUD1-217ENST00000569429 DUSP6Q16828 381 aa8□□□□□ -1.13
HERPUD1-217ENST00000569429 ZNF528Q3MIS6 628 aa8□□□□□ -1.13
HERPUD1-217ENST00000569429 N4BP2L1Q5TBK1 243 aaPredicted RBP8□□□□□ -1.13
HERPUD1-217ENST00000569429 UNQ6494/PRO21346Q6UXR6 183 aa8□□□□□ -1.13
HERPUD1-217ENST00000569429 C1orf210Q8IVY1 113 aa8□□□□□ -1.13
HERPUD1-217ENST00000569429 PLCD3Q8N3E9 789 aa8□□□□□ -1.13
HERPUD1-217ENST00000569429 POF1BQ8WVV4 589 aa8□□□□□ -1.13
HERPUD1-217ENST00000569429 SEPT8Q92599 483 aa8□□□□□ -1.13
HERPUD1-217ENST00000569429 WNT8BQ93098 351 aa8□□□□□ -1.13
HERPUD1-217ENST00000569429 ZNF689Q96CS4 500 aaPredicted RBP8□□□□□ -1.13
HERPUD1-217ENST00000569429 NEUROD6Q96NK8 337 aa8□□□□□ -1.13
HERPUD1-217ENST00000569429 KANSL2Q9H9L4 492 aa8□□□□□ -1.13
HERPUD1-217ENST00000569429 LIMD1Q9UGP4 676 aa8□□□□□ -1.13
HERPUD1-217ENST00000569429 USP18Q9UMW8 372 aa8□□□□□ -1.13
HERPUD1-217ENST00000569429 FANCIQ9NVI1 1328 aa8□□□□□ -1.13
HERPUD1-217ENST00000569429 HECTD1Q9ULT8 2610 aa7.99□□□□□ -1.13
HERPUD1-217ENST00000569429 LOC102724159A0A0B4J2E5 919 aa7.99□□□□□ -1.13
HERPUD1-217ENST00000569429 TMEM8BA6NDV4 472 aa7.99□□□□□ -1.13
HERPUD1-217ENST00000569429 SRRM3A6NNA2 597 aaPredicted RBP7.99□□□□□ -1.13
HERPUD1-217ENST00000569429 RSPH10B2B2RC85 870 aa7.99□□□□□ -1.13
HERPUD1-217ENST00000569429 C1QTNF9BB2RNN3 333 aa7.99□□□□□ -1.13
HERPUD1-217ENST00000569429 E9PSI1 815 aa7.99□□□□□ -1.13
HERPUD1-217ENST00000569429 PER2O15055 1255 aa7.99□□□□□ -1.13
HERPUD1-217ENST00000569429 CYP2E1P05181 493 aaPredicted RBP7.99□□□□□ -1.13
HERPUD1-217ENST00000569429 C1QTNF9P0C862 333 aa7.99□□□□□ -1.13
HERPUD1-217ENST00000569429 RSPH10BP0C881 870 aa7.99□□□□□ -1.13
HERPUD1-217ENST00000569429 EVX2Q03828 476 aa7.99□□□□□ -1.13
HERPUD1-217ENST00000569429 TFCP2Q12800 502 aa7.99□□□□□ -1.13
HERPUD1-217ENST00000569429 PWP2Q15269 919 aaKnown RBP7.99□□□□□ -1.13
HERPUD1-217ENST00000569429 SOWAHCQ53LP3 525 aaPredicted RBP7.99□□□□□ -1.13
HERPUD1-217ENST00000569429 GORABQ5T7V8 394 aa7.99□□□□□ -1.13
HERPUD1-217ENST00000569429 SIX5Q8N196 739 aa7.99□□□□□ -1.13
HERPUD1-217ENST00000569429 RASGRP4Q8TDF6 673 aa7.99□□□□□ -1.13
HERPUD1-217ENST00000569429 KAT2BQ92831 832 aa7.99□□□□□ -1.13
HERPUD1-217ENST00000569429 POMKQ9H5K3 350 aa7.99□□□□□ -1.13
HERPUD1-217ENST00000569429 PARD6AQ9NPB6 346 aa7.99□□□□□ -1.13
HERPUD1-217ENST00000569429 HOMER2Q9NSB8 354 aa7.99□□□□□ -1.13
HERPUD1-217ENST00000569429 DLGAP2Q9P1A6 1054 aa7.99□□□□□ -1.13
HERPUD1-217ENST00000569429 DUSP12Q9UNI6 340 aa7.99□□□□□ -1.13
HERPUD1-217ENST00000569429 GREB1Q4ZG55 1949 aa7.98□□□□□ -1.13
HERPUD1-217ENST00000569429 TEP1Q99973 2627 aaKnown RBP7.98□□□□□ -1.13
HERPUD1-217ENST00000569429 FDX1P10109 184 aa7.98□□□□□ -1.13
HERPUD1-217ENST00000569429 TECP42680 631 aa7.98□□□□□ -1.13
HERPUD1-217ENST00000569429 CHMP4BP1P59074 171 aa7.98□□□□□ -1.13
HERPUD1-217ENST00000569429 BTG3Q14201 252 aaPredicted RBP7.98□□□□□ -1.13
HERPUD1-217ENST00000569429 PPP2R5BQ15173 497 aa7.98□□□□□ -1.13
HERPUD1-217ENST00000569429 TMED8Q6PL24 325 aaPredicted RBP7.98□□□□□ -1.13
HERPUD1-217ENST00000569429 PRR23BQ6ZRT6 265 aa7.98□□□□□ -1.13
HERPUD1-217ENST00000569429 WWC1Q8IX03 1113 aa7.98□□□□□ -1.13
HERPUD1-217ENST00000569429 LRRC47Q8N1G4 583 aaKnown RBP7.98□□□□□ -1.13
HERPUD1-217ENST00000569429 MIGA1Q8NAN2 632 aa7.98□□□□□ -1.13
HERPUD1-217ENST00000569429 KLHL23Q8NBE8 558 aa7.98□□□□□ -1.13
HERPUD1-217ENST00000569429 APBB2Q92870 758 aa7.98□□□□□ -1.13
HERPUD1-217ENST00000569429 NUP88Q99567 741 aaPredicted RBP7.98□□□□□ -1.13
HERPUD1-217ENST00000569429 EPC1Q9H2F5 836 aa7.98□□□□□ -1.13
HERPUD1-217ENST00000569429 SNRKQ9NRH2 765 aa7.98□□□□□ -1.13
HERPUD1-217ENST00000569429 RNF146Q9NTX7 359 aa7.98□□□□□ -1.13
HERPUD1-217ENST00000569429 ANKFY1Q9P2R3 1169 aa7.98□□□□□ -1.13
HERPUD1-217ENST00000569429 HDAC6Q9UBN7 1215 aa7.98□□□□□ -1.13
HERPUD1-217ENST00000569429 WNT16Q9UBV4 365 aa7.98□□□□□ -1.13
HERPUD1-217ENST00000569429 FBXL21Q9UKT6 434 aa7.98□□□□□ -1.13
HERPUD1-217ENST00000569429 SMG5Q9UPR3 1016 aaKnown RBP7.98□□□□□ -1.13
HERPUD1-217ENST00000569429 USTQ9Y2C2 406 aa7.98□□□□□ -1.13
HERPUD1-217ENST00000569429 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.98□□□□□ -1.13
HERPUD1-217ENST00000569429 PTPN13Q12923 2485 aa7.98□□□□□ -1.13
HERPUD1-217ENST00000569429 FNDC1Q4ZHG4 1894 aaPredicted RBP7.98□□□□□ -1.13
HERPUD1-217ENST00000569429 FREM2Q5SZK8 3169 aa7.98□□□□□ -1.13
HERPUD1-217ENST00000569429 LOXHD1Q8IVV2 1947 aa7.97□□□□□ -1.13
HERPUD1-217ENST00000569429 PCNX2A6NKB5 2137 aa7.97□□□□□ -1.13
HERPUD1-217ENST00000569429 RAD21O60216 631 aa7.97□□□□□ -1.13
HERPUD1-217ENST00000569429 MMP3P08254 477 aa7.97□□□□□ -1.13
HERPUD1-217ENST00000569429 UBE3AQ05086 875 aa7.97□□□□□ -1.13
HERPUD1-217ENST00000569429 ITIH3Q06033 890 aa7.97□□□□□ -1.13
HERPUD1-217ENST00000569429 EXOSC9Q06265 439 aaKnown RBP7.97□□□□□ -1.13
HERPUD1-217ENST00000569429 TDGQ13569 410 aa7.97□□□□□ -1.13
HERPUD1-217ENST00000569429 TKFCQ3LXA3 575 aa7.97□□□□□ -1.13
HERPUD1-217ENST00000569429 MAML2Q8IZL2 1156 aaPredicted RBP7.97□□□□□ -1.13
HERPUD1-217ENST00000569429 C7orf31Q8N865 590 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms