RNA–Protein interactions for RNA: ENST00000569394.5

GTF3C1-210, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-210ENST00000569394 GGPS1O95749 300 aa10.34□□□□□ -0.75
GTF3C1-210ENST00000569394 ZNF286BP0CG31 522 aa10.34□□□□□ -0.75
GTF3C1-210ENST00000569394 ZNF76P36508 570 aa10.34□□□□□ -0.75
GTF3C1-210ENST00000569394 MAGEA10P43363 369 aaPredicted RBP10.34□□□□□ -0.75
GTF3C1-210ENST00000569394 CPT1AP50416 773 aa10.34□□□□□ -0.75
GTF3C1-210ENST00000569394 ARHGAP1Q07960 439 aa10.34□□□□□ -0.75
GTF3C1-210ENST00000569394 ITGA7Q13683 1181 aa10.34□□□□□ -0.75
GTF3C1-210ENST00000569394 UTP14CQ5TAP6 766 aaKnown RBP10.34□□□□□ -0.75
GTF3C1-210ENST00000569394 CCDC62Q6P9F0 684 aa10.34□□□□□ -0.75
GTF3C1-210ENST00000569394 CYFIP1Q7L576 1253 aa10.34□□□□□ -0.75
GTF3C1-210ENST00000569394 BADQ92934 168 aa10.34□□□□□ -0.75
GTF3C1-210ENST00000569394 ZNF274Q96GC6 653 aaPredicted RBP10.34□□□□□ -0.75
GTF3C1-210ENST00000569394 LBHD1Q9BQE6 289 aaPredicted RBP10.34□□□□□ -0.75
GTF3C1-210ENST00000569394 C22orf23Q9BZE7 217 aa10.34□□□□□ -0.75
GTF3C1-210ENST00000569394 PPP1R12CQ9BZL4 782 aa10.34□□□□□ -0.75
GTF3C1-210ENST00000569394 TRPV6Q9H1D0 765 aa10.34□□□□□ -0.75
GTF3C1-210ENST00000569394 RIC8AQ9NPQ8 531 aa10.34□□□□□ -0.75
GTF3C1-210ENST00000569394 GJB4Q9NTQ9 266 aa10.34□□□□□ -0.75
GTF3C1-210ENST00000569394 BARHL2Q9NY43 387 aa10.34□□□□□ -0.75
GTF3C1-210ENST00000569394 MAP3K20Q9NYL2 800 aaKnown RBP10.34□□□□□ -0.75
GTF3C1-210ENST00000569394 PCDHB8Q9UN66 801 aa10.34□□□□□ -0.75
GTF3C1-210ENST00000569394 PCDHB13Q9Y5F0 798 aa10.34□□□□□ -0.75
GTF3C1-210ENST00000569394 LOC102724159A0A0B4J2E5 919 aa10.33□□□□□ -0.76
GTF3C1-210ENST00000569394 A0A0U1RQG5 324 aaPredicted RBP10.33□□□□□ -0.76
GTF3C1-210ENST00000569394 TRIM43BA6NCK2 446 aa10.33□□□□□ -0.76
GTF3C1-210ENST00000569394 DCDC2CA8MYV0 355 aa10.33□□□□□ -0.76
GTF3C1-210ENST00000569394 DDX39AO00148 427 aaKnown RBP10.33□□□□□ -0.76
GTF3C1-210ENST00000569394 ARVCFO00192 962 aa10.33□□□□□ -0.76
GTF3C1-210ENST00000569394 MMP3P08254 477 aa10.33□□□□□ -0.76
GTF3C1-210ENST00000569394 CLTBP09497 229 aa10.33□□□□□ -0.76
GTF3C1-210ENST00000569394 RAG1P15918 1043 aa10.33□□□□□ -0.76
GTF3C1-210ENST00000569394 UBA1P22314 1058 aaKnown RBP10.33□□□□□ -0.76
GTF3C1-210ENST00000569394 ITGB8P26012 769 aa10.33□□□□□ -0.76
GTF3C1-210ENST00000569394 CST5P28325 142 aaPredicted RBP10.33□□□□□ -0.76
GTF3C1-210ENST00000569394 NLRP5P59047 1200 aa10.33□□□□□ -0.76
GTF3C1-210ENST00000569394 ANAPC15P60006 121 aa10.33□□□□□ -0.76
GTF3C1-210ENST00000569394 PURAQ00577 322 aaKnown RBP10.33□□□□□ -0.76
GTF3C1-210ENST00000569394 PWP2Q15269 919 aaKnown RBP10.33□□□□□ -0.76
GTF3C1-210ENST00000569394 ME3Q16798 604 aa10.33□□□□□ -0.76
GTF3C1-210ENST00000569394 NBPF20Q3BBV1 942 aa10.33□□□□□ -0.76
GTF3C1-210ENST00000569394 GNPTABQ3T906 1256 aa10.33□□□□□ -0.76
GTF3C1-210ENST00000569394 BRDTQ58F21 947 aaPredicted RBP10.33□□□□□ -0.76
GTF3C1-210ENST00000569394 TRIM22Q8IYM9 498 aa10.33□□□□□ -0.76
GTF3C1-210ENST00000569394 CYP2W1Q8TAV3 490 aa10.33□□□□□ -0.76
GTF3C1-210ENST00000569394 TRIM43Q96BQ3 446 aaPredicted RBP10.33□□□□□ -0.76
GTF3C1-210ENST00000569394 SPATA33Q96N06 139 aa10.33□□□□□ -0.76
GTF3C1-210ENST00000569394 ANO3Q9BYT9 981 aa10.33□□□□□ -0.76
GTF3C1-210ENST00000569394 UBE2OQ9C0C9 1292 aaKnown RBP10.33□□□□□ -0.76
GTF3C1-210ENST00000569394 C6orf50Q9HD87 102 aa10.33□□□□□ -0.76
GTF3C1-210ENST00000569394 PDLIM7Q9NR12 457 aa10.33□□□□□ -0.76
GTF3C1-210ENST00000569394 KCNJ14Q9UNX9 436 aa10.33□□□□□ -0.76
GTF3C1-210ENST00000569394 GRIN2DO15399 1336 aa10.33□□□□□ -0.76
GTF3C1-210ENST00000569394 PIK3CDO00329 1044 aa10.32□□□□□ -0.76
GTF3C1-210ENST00000569394 NOP56O00567 594 aaKnown RBP10.32□□□□□ -0.76
GTF3C1-210ENST00000569394 NKRFO15226 690 aaKnown RBP eCLIP10.32□□□□□ -0.76
GTF3C1-210ENST00000569394 ATP9AO75110 1047 aa10.32□□□□□ -0.76
GTF3C1-210ENST00000569394 CYP2C9P11712 490 aa10.32□□□□□ -0.76
GTF3C1-210ENST00000569394 IFNAR1P17181 557 aa10.32□□□□□ -0.76
GTF3C1-210ENST00000569394 RCAN1P53805 252 aa10.32□□□□□ -0.76
GTF3C1-210ENST00000569394 GHRHRQ02643 423 aa10.32□□□□□ -0.76
GTF3C1-210ENST00000569394 FAAP100Q0VG06 881 aa10.32□□□□□ -0.76
GTF3C1-210ENST00000569394 SEMA3FQ13275 785 aa10.32□□□□□ -0.76
GTF3C1-210ENST00000569394 PDAP1Q13442 181 aaKnown RBP10.32□□□□□ -0.76
GTF3C1-210ENST00000569394 HSDL1Q3SXM5 330 aa10.32□□□□□ -0.76
GTF3C1-210ENST00000569394 PCNX4Q63HM2 1172 aa10.32□□□□□ -0.76
GTF3C1-210ENST00000569394 CPLX2Q6PUV4 134 aaKnown RBP10.32□□□□□ -0.76
GTF3C1-210ENST00000569394 FBXL16Q8N461 479 aa10.32□□□□□ -0.76
GTF3C1-210ENST00000569394 SAMD3Q8N6K7 520 aa10.32□□□□□ -0.76
GTF3C1-210ENST00000569394 MTG1Q9BT17 334 aaPredicted RBP10.32□□□□□ -0.76
GTF3C1-210ENST00000569394 RNF26Q9BY78 433 aaPredicted RBP10.32□□□□□ -0.76
GTF3C1-210ENST00000569394 TRMT13Q9NUP7 481 aaKnown RBP10.32□□□□□ -0.76
GTF3C1-210ENST00000569394 POLR3EQ9NVU0 708 aa10.32□□□□□ -0.76
GTF3C1-210ENST00000569394 Q9Y3F1 56 aa10.32□□□□□ -0.76
GTF3C1-210ENST00000569394 B4GALT4O60513 344 aa10.31□□□□□ -0.76
GTF3C1-210ENST00000569394 PFKFB2O60825 505 aa10.31□□□□□ -0.76
GTF3C1-210ENST00000569394 EIF5BO60841 1220 aaKnown RBP10.31□□□□□ -0.76
GTF3C1-210ENST00000569394 CTDNEP1O95476 244 aa10.31□□□□□ -0.76
GTF3C1-210ENST00000569394 EVCP57679 992 aa10.31□□□□□ -0.76
GTF3C1-210ENST00000569394 LAMC2Q13753 1193 aa10.31□□□□□ -0.76
GTF3C1-210ENST00000569394 SNX17Q15036 470 aa10.31□□□□□ -0.76
GTF3C1-210ENST00000569394 ANKRD1Q15327 319 aa10.31□□□□□ -0.76
GTF3C1-210ENST00000569394 CELF3Q5SZQ8 465 aaKnown RBP10.31□□□□□ -0.76
GTF3C1-210ENST00000569394 MYSM1Q5VVJ2 828 aa10.31□□□□□ -0.76
GTF3C1-210ENST00000569394 PPP1R18Q6NYC8 613 aa10.31□□□□□ -0.76
GTF3C1-210ENST00000569394 TRMT1LQ7Z2T5 733 aaKnown RBP10.31□□□□□ -0.76
GTF3C1-210ENST00000569394 NLRX1Q86UT6 975 aa10.31□□□□□ -0.76
GTF3C1-210ENST00000569394 CCDC83Q8IWF9 413 aa10.31□□□□□ -0.76
GTF3C1-210ENST00000569394 CCDC12Q8WUD4 166 aaPredicted RBP10.31□□□□□ -0.76
GTF3C1-210ENST00000569394 EHMT1Q9H9B1 1298 aa10.31□□□□□ -0.76
GTF3C1-210ENST00000569394 ELP1O95163 1332 aa10.31□□□□□ -0.76
GTF3C1-210ENST00000569394 UMODL1Q5DID0 1318 aa10.31□□□□□ -0.76
GTF3C1-210ENST00000569394 NID2Q14112 1375 aa10.3□□□□□ -0.76
GTF3C1-210ENST00000569394 A6NJR5 290 aa10.3□□□□□ -0.76
GTF3C1-210ENST00000569394 SPATA31C2B4DYI2 1134 aa10.3□□□□□ -0.76
GTF3C1-210ENST00000569394 TLR3O15455 904 aaKnown RBP10.3□□□□□ -0.76
GTF3C1-210ENST00000569394 FIBPO43427 364 aa10.3□□□□□ -0.76
GTF3C1-210ENST00000569394 JAK2O60674 1132 aa10.3□□□□□ -0.76
GTF3C1-210ENST00000569394 DEXIO95424 95 aa10.3□□□□□ -0.76
GTF3C1-210ENST00000569394 ARP10275 920 aa10.3□□□□□ -0.76
GTF3C1-210ENST00000569394 ACRP10323 421 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms