RNA–Protein interactions for RNA: ENST00000569243.5

UBR1-209, Transcript of ubiquitin protein ligase E3 component n-recognin 1, human

TSL 3

Gene UBR1, Length 702 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBR1-209	ENST00000569243	KIAA1211L	Q6NV74	962 aa		5.77	□□□□□ -1.49
UBR1-209	ENST00000569243	VHLL	Q6RSH7	139 aa		5.77	□□□□□ -1.49
UBR1-209	ENST00000569243	BVES	Q8NE79	360 aa		5.77	□□□□□ -1.49
UBR1-209	ENST00000569243		Q8TCH9	128 aa		5.77	□□□□□ -1.49
UBR1-209	ENST00000569243	ZNF503	Q96F45	646 aa		5.77	□□□□□ -1.49
UBR1-209	ENST00000569243	CYP26B1	Q9NR63	512 aa		5.77	□□□□□ -1.49
UBR1-209	ENST00000569243	FBLN5	Q9UBX5	448 aa		5.77	□□□□□ -1.49
UBR1-209	ENST00000569243	AKT3	Q9Y243	479 aa		5.77	□□□□□ -1.49
UBR1-209	ENST00000569243	C7orf72	A4D263	438 aa		5.76	□□□□□ -1.49
UBR1-209	ENST00000569243	EPHB4	P54760	987 aa		5.76	□□□□□ -1.49
UBR1-209	ENST00000569243	NRN1L	Q496H8	165 aa		5.76	□□□□□ -1.49
UBR1-209	ENST00000569243	PRR31	Q5SQ13	230 aa		5.76	□□□□□ -1.49
UBR1-209	ENST00000569243	DPY19L2P1	Q6NXN4	242 aa		5.76	□□□□□ -1.49
UBR1-209	ENST00000569243	ARHGEF18	Q6ZSZ5	1173 aa		5.76	□□□□□ -1.49
UBR1-209	ENST00000569243	AMER2	Q8N7J2	671 aa		5.76	□□□□□ -1.49
UBR1-209	ENST00000569243	VOPP1	Q96AW1	172 aa		5.76	□□□□□ -1.49
UBR1-209	ENST00000569243	CSRNP2	Q9H175	543 aa		5.76	□□□□□ -1.49
UBR1-209	ENST00000569243	RWDD3	Q9Y3V2	267 aa		5.76	□□□□□ -1.49
UBR1-209	ENST00000569243	C9orf118	A6NHY6	69 aa		5.75	□□□□□ -1.49
UBR1-209	ENST00000569243	NOP56	O00567	594 aa	Known RBP	5.75	□□□□□ -1.49
UBR1-209	ENST00000569243	NARS	O43776	548 aa	Known RBP	5.75	□□□□□ -1.49
UBR1-209	ENST00000569243	CYP1A1	P04798	512 aa	Predicted RBP	5.75	□□□□□ -1.49
UBR1-209	ENST00000569243	RNF207	Q6ZRF8	634 aa		5.75	□□□□□ -1.49
UBR1-209	ENST00000569243	CPNE8	Q86YQ8	564 aa		5.75	□□□□□ -1.49
UBR1-209	ENST00000569243	DCP2	Q8IU60	420 aa	Known RBP	5.75	□□□□□ -1.49
UBR1-209	ENST00000569243	SCUBE1	Q8IWY4	988 aa		5.75	□□□□□ -1.49
UBR1-209	ENST00000569243	FAM26E	Q8N5C1	309 aa		5.75	□□□□□ -1.49
UBR1-209	ENST00000569243	TTLL6	Q8N841	843 aa		5.75	□□□□□ -1.49
UBR1-209	ENST00000569243	PLEKHO2	Q8TD55	490 aa		5.75	□□□□□ -1.49
UBR1-209	ENST00000569243	MRRF	Q96E11	262 aa	Known RBP	5.75	□□□□□ -1.49
UBR1-209	ENST00000569243	MCM7	P33993	719 aa		5.74	□□□□□ -1.49
UBR1-209	ENST00000569243	SLC6A11	P48066	632 aa		5.74	□□□□□ -1.49
UBR1-209	ENST00000569243	LRCH2	Q5VUJ6	765 aa		5.74	□□□□□ -1.49
UBR1-209	ENST00000569243	E4F1	Q66K89	784 aa	Predicted RBP	5.74	□□□□□ -1.49
UBR1-209	ENST00000569243	RIOX2	Q8IUF8	465 aa		5.74	□□□□□ -1.49
UBR1-209	ENST00000569243	TRIM59	Q8IWR1	403 aa		5.74	□□□□□ -1.49
UBR1-209	ENST00000569243	FAM169B	Q8N8A8	192 aa		5.74	□□□□□ -1.49
UBR1-209	ENST00000569243	MRGPRX3	Q96LB0	322 aa		5.74	□□□□□ -1.49
UBR1-209	ENST00000569243	CCDC140	Q96MF4	163 aa		5.74	□□□□□ -1.49
UBR1-209	ENST00000569243	NKX2-4	Q9H2Z4	354 aa		5.74	□□□□□ -1.49
UBR1-209	ENST00000569243	NGRN	Q9NPE2	291 aa	Known RBP	5.74	□□□□□ -1.49
UBR1-209	ENST00000569243	GULP1	Q9UBP9	304 aa		5.74	□□□□□ -1.49
UBR1-209	ENST00000569243	APEX2	Q9UBZ4	518 aa		5.74	□□□□□ -1.49
UBR1-209	ENST00000569243	KCNH1	O95259	989 aa		5.73	□□□□□ -1.49
UBR1-209	ENST00000569243	PLS3	P13797	630 aa		5.73	□□□□□ -1.49
UBR1-209	ENST00000569243	IL12RB1	P42701	662 aa		5.73	□□□□□ -1.49
UBR1-209	ENST00000569243	INHBC	P55103	352 aa		5.73	□□□□□ -1.49
UBR1-209	ENST00000569243	SCRN1	Q12765	414 aa		5.73	□□□□□ -1.49
UBR1-209	ENST00000569243	TESK1	Q15569	626 aa		5.73	□□□□□ -1.49
UBR1-209	ENST00000569243	MROH9	Q5TGP6	573 aa		5.73	□□□□□ -1.49
UBR1-209	ENST00000569243	PRAMEF18	Q5VWM3	479 aa		5.73	□□□□□ -1.49
UBR1-209	ENST00000569243	SLFN13	Q68D06	897 aa		5.73	□□□□□ -1.49
UBR1-209	ENST00000569243	CD300LD	Q6UXZ3	194 aa		5.73	□□□□□ -1.49
UBR1-209	ENST00000569243	HOMEZ	Q8IX15	550 aa		5.73	□□□□□ -1.49
UBR1-209	ENST00000569243	MBD6	Q96DN6	1003 aa		5.73	□□□□□ -1.49
UBR1-209	ENST00000569243	AP5M1	Q9H0R1	490 aa		5.73	□□□□□ -1.49
UBR1-209	ENST00000569243	KIAA1522	Q9P206	1035 aa	Predicted RBP	5.73	□□□□□ -1.49
UBR1-209	ENST00000569243	INPP5F	Q9Y2H2	1132 aa		5.73	□□□□□ -1.49
UBR1-209	ENST00000569243	FUCA1	P04066	466 aa		5.72	□□□□□ -1.49
UBR1-209	ENST00000569243	NTRK1	P04629	796 aa		5.72	□□□□□ -1.49
UBR1-209	ENST00000569243	SCG5	P05408	212 aa		5.72	□□□□□ -1.49
UBR1-209	ENST00000569243	ATF4	P18848	351 aa	Predicted RBP	5.72	□□□□□ -1.49
UBR1-209	ENST00000569243	HOXC12	P31275	282 aa		5.72	□□□□□ -1.49
UBR1-209	ENST00000569243	GTF2A2	P52657	109 aa		5.72	□□□□□ -1.49
UBR1-209	ENST00000569243	ITGA1	P56199	1179 aa		5.72	□□□□□ -1.49
UBR1-209	ENST00000569243	KRTAP10-9	P60411	292 aa		5.72	□□□□□ -1.49
UBR1-209	ENST00000569243	PRKD1	Q15139	912 aa	Predicted RBP	5.72	□□□□□ -1.49
UBR1-209	ENST00000569243	TNNI3K	Q59H18	835 aa		5.72	□□□□□ -1.49
UBR1-209	ENST00000569243	GTF2IRD2B	Q6EKJ0	949 aa		5.72	□□□□□ -1.49
UBR1-209	ENST00000569243	GTF2IRD2	Q86UP8	949 aa		5.72	□□□□□ -1.49
UBR1-209	ENST00000569243	MIB1	Q86YT6	1006 aa		5.72	□□□□□ -1.49
UBR1-209	ENST00000569243		Q8N1Y9	231 aa		5.72	□□□□□ -1.49
UBR1-209	ENST00000569243	NEU4	Q8WWR8	484 aa	Predicted RBP	5.72	□□□□□ -1.49
UBR1-209	ENST00000569243	SEC14L1	Q92503	715 aa		5.72	□□□□□ -1.49
UBR1-209	ENST00000569243	DPF3	Q92784	378 aa		5.72	□□□□□ -1.49
UBR1-209	ENST00000569243	CLEC1B	Q9P126	229 aa		5.72	□□□□□ -1.49
UBR1-209	ENST00000569243	SIT1	Q9Y3P8	196 aa		5.72	□□□□□ -1.49
UBR1-209	ENST00000569243	ETV3L	Q6ZN32	361 aa		5.71	□□□□□ -1.5
UBR1-209	ENST00000569243	VPS37D	Q86XT2	251 aa		5.71	□□□□□ -1.5
UBR1-209	ENST00000569243	KBTBD2	Q8IY47	623 aa		5.71	□□□□□ -1.5
UBR1-209	ENST00000569243	NPLOC4	Q8TAT6	608 aa		5.71	□□□□□ -1.5
UBR1-209	ENST00000569243	FRS2	Q8WU20	508 aa		5.71	□□□□□ -1.5
UBR1-209	ENST00000569243		X6R8D5	127 aa		5.71	□□□□□ -1.5
UBR1-209	ENST00000569243	B4GALT4	O60513	344 aa		5.7	□□□□□ -1.5
UBR1-209	ENST00000569243	CP	P00450	1065 aa		5.7	□□□□□ -1.5
UBR1-209	ENST00000569243	THBD	P07204	575 aa		5.7	□□□□□ -1.5
UBR1-209	ENST00000569243	DGCR2	P98153	550 aa		5.7	□□□□□ -1.5
UBR1-209	ENST00000569243	PTH1R	Q03431	593 aa		5.7	□□□□□ -1.5
UBR1-209	ENST00000569243	LSM12	Q3MHD2	195 aa	Known RBP	5.7	□□□□□ -1.5
UBR1-209	ENST00000569243	USP39	Q53GS9	565 aa	Known RBP	5.7	□□□□□ -1.5
UBR1-209	ENST00000569243	HS1BP3	Q53T59	392 aa		5.7	□□□□□ -1.5
UBR1-209	ENST00000569243	ACBD5	Q5T8D3	534 aa	Predicted RBP	5.7	□□□□□ -1.5
UBR1-209	ENST00000569243	MBLAC2	Q68D91	279 aa		5.7	□□□□□ -1.5
UBR1-209	ENST00000569243	ZC3H18	Q86VM9	953 aa	Known RBP	5.7	□□□□□ -1.5
UBR1-209	ENST00000569243	ACBD3	Q9H3P7	528 aa		5.7	□□□□□ -1.5
UBR1-209	ENST00000569243	CCSER2	Q9H7U1	834 aa		5.7	□□□□□ -1.5
UBR1-209	ENST00000569243	GPRC5C	Q9NQ84	441 aa		5.7	□□□□□ -1.5
UBR1-209	ENST00000569243	TIMM13	Q9Y5L4	95 aa	Predicted RBP	5.7	□□□□□ -1.5
UBR1-209	ENST00000569243	C22orf46	C9J442	243 aa		5.69	□□□□□ -1.5
UBR1-209	ENST00000569243	ZNF28	P17035	718 aa		5.69	□□□□□ -1.5

Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms