RNA–Protein interactions for RNA: ENST00000568848.5

USB1-214, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 548 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-214ENST00000568848 SLC35G1Q2M3R5 365 aa17.36■□□□□ 0.37
USB1-214ENST00000568848 HSDL1Q3SXM5 330 aa17.36■□□□□ 0.37
USB1-214ENST00000568848 EP400NLQ6ZTU2 488 aa17.36■□□□□ 0.37
USB1-214ENST00000568848 FBXO22Q8NEZ5 403 aa17.36■□□□□ 0.37
USB1-214ENST00000568848 BAZ2BQ9UIF8 2168 aaKnown RBP17.36■□□□□ 0.37
USB1-214ENST00000568848 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.35■□□□□ 0.37
USB1-214ENST00000568848 PI4K2BG5E9Z4 385 aa17.35■□□□□ 0.37
USB1-214ENST00000568848 NR3C2P08235 984 aa17.35■□□□□ 0.37
USB1-214ENST00000568848 SSTR3P32745 418 aaPredicted RBP17.35■□□□□ 0.37
USB1-214ENST00000568848 RBL2Q08999 1139 aa17.35■□□□□ 0.37
USB1-214ENST00000568848 MKRN4PQ13434 485 aaPredicted RBP17.35■□□□□ 0.37
USB1-214ENST00000568848 GPATCH4Q5T3I0 446 aaKnown RBP17.35■□□□□ 0.37
USB1-214ENST00000568848 PTCRAQ6ISU1 281 aaPredicted RBP17.35■□□□□ 0.37
USB1-214ENST00000568848 B4GALNT3Q6L9W6 998 aa17.35■□□□□ 0.37
USB1-214ENST00000568848 ALYREFQ86V81 257 aaKnown RBP17.35■□□□□ 0.37
USB1-214ENST00000568848 FBXO11Q86XK2 927 aa17.35■□□□□ 0.37
USB1-214ENST00000568848 FAM178BQ8IXR5 827 aa17.35■□□□□ 0.37
USB1-214ENST00000568848 DHX37Q8IY37 1157 aaKnown RBP17.35■□□□□ 0.37
USB1-214ENST00000568848 ENAHQ8N8S7 591 aaPredicted RBP17.35■□□□□ 0.37
USB1-214ENST00000568848 TTC14Q96N46 770 aa17.35■□□□□ 0.37
USB1-214ENST00000568848 UIMC1Q96RL1 719 aa17.35■□□□□ 0.37
USB1-214ENST00000568848 ABHD14A-ACY1A0A1B0GW23 586 aa17.34■□□□□ 0.37
USB1-214ENST00000568848 GPR37L1O60883 481 aa17.34■□□□□ 0.37
USB1-214ENST00000568848 GGPS1O95749 300 aa17.34■□□□□ 0.37
USB1-214ENST00000568848 PTK7Q13308 1070 aa17.34■□□□□ 0.37
USB1-214ENST00000568848 IKBKEQ14164 716 aa17.34■□□□□ 0.37
USB1-214ENST00000568848 GJD3Q8N144 294 aa17.34■□□□□ 0.37
USB1-214ENST00000568848 RGS22Q8NE09 1264 aa17.34■□□□□ 0.37
USB1-214ENST00000568848 ESR2Q92731 530 aa17.34■□□□□ 0.37
USB1-214ENST00000568848 IL25Q9H293 177 aa17.34■□□□□ 0.37
USB1-214ENST00000568848 KAT14Q9H8E8 782 aa17.34■□□□□ 0.37
USB1-214ENST00000568848 ZMYM6O95789 1325 aa17.33■□□□□ 0.36
USB1-214ENST00000568848 TREHO43280 583 aa17.33■□□□□ 0.36
USB1-214ENST00000568848 UBA1P22314 1058 aaKnown RBP17.33■□□□□ 0.36
USB1-214ENST00000568848 CLUL1Q15846 466 aa17.33■□□□□ 0.36
USB1-214ENST00000568848 LEXMQ3ZCV2 418 aa17.33■□□□□ 0.36
USB1-214ENST00000568848 MYSM1Q5VVJ2 828 aa17.33■□□□□ 0.36
USB1-214ENST00000568848 TRIM50Q86XT4 487 aa17.33■□□□□ 0.36
USB1-214ENST00000568848 PPTC7Q8NI37 304 aa17.33■□□□□ 0.36
USB1-214ENST00000568848 SPATA33Q96N06 139 aa17.33■□□□□ 0.36
USB1-214ENST00000568848 PDCD2LQ9BRP1 358 aa17.33■□□□□ 0.36
USB1-214ENST00000568848 C16orf70Q9BSU1 422 aa17.33■□□□□ 0.36
USB1-214ENST00000568848 NLRC5Q86WI3 1866 aa17.33■□□□□ 0.36
USB1-214ENST00000568848 B4DLN1 442 aa17.32■□□□□ 0.36
USB1-214ENST00000568848 ZNF213O14771 459 aa17.32■□□□□ 0.36
USB1-214ENST00000568848 EIF3JO75822 258 aaKnown RBP17.32■□□□□ 0.36
USB1-214ENST00000568848 PARP1P09874 1014 aaKnown RBP17.32■□□□□ 0.36
USB1-214ENST00000568848 SDSP20132 328 aa17.32■□□□□ 0.36
USB1-214ENST00000568848 MRPL12P52815 198 aaKnown RBP17.32■□□□□ 0.36
USB1-214ENST00000568848 EPC2Q52LR7 807 aa17.32■□□□□ 0.36
USB1-214ENST00000568848 TCEAL5Q5H9L2 206 aa17.32■□□□□ 0.36
USB1-214ENST00000568848 CWC27Q6UX04 472 aaKnown RBP17.32■□□□□ 0.36
USB1-214ENST00000568848 HOMER1Q86YM7 354 aa17.32■□□□□ 0.36
USB1-214ENST00000568848 IWS1Q96ST2 819 aa17.32■□□□□ 0.36
USB1-214ENST00000568848 ZSCAN10Q96SZ4 725 aaPredicted RBP17.32■□□□□ 0.36
USB1-214ENST00000568848 SENP2Q9HC62 589 aa17.32■□□□□ 0.36
USB1-214ENST00000568848 ZSWIM5Q9P217 1185 aa17.32■□□□□ 0.36
USB1-214ENST00000568848 TRIOO75962 3097 aa17.32■□□□□ 0.36
USB1-214ENST00000568848 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.31■□□□□ 0.36
USB1-214ENST00000568848 RSPH10B2B2RC85 870 aa17.31■□□□□ 0.36
USB1-214ENST00000568848 RSPH10BP0C881 870 aa17.31■□□□□ 0.36
USB1-214ENST00000568848 HSD17B4P51659 736 aa17.31■□□□□ 0.36
USB1-214ENST00000568848 LAMC2Q13753 1193 aa17.31■□□□□ 0.36
USB1-214ENST00000568848 CELF3Q5SZQ8 465 aaKnown RBP17.31■□□□□ 0.36
USB1-214ENST00000568848 CYB5R4Q7L1T6 521 aa17.31■□□□□ 0.36
USB1-214ENST00000568848 SERINC5Q86VE9 423 aa17.31■□□□□ 0.36
USB1-214ENST00000568848 FCHSD1Q86WN1 690 aa17.31■□□□□ 0.36
USB1-214ENST00000568848 DGKHQ86XP1 1220 aa17.31■□□□□ 0.36
USB1-214ENST00000568848 PIBF1Q8WXW3 757 aa17.31■□□□□ 0.36
USB1-214ENST00000568848 EMID1Q96A84 441 aaPredicted RBP17.31■□□□□ 0.36
USB1-214ENST00000568848 LMCD1Q9NZU5 365 aa17.31■□□□□ 0.36
USB1-214ENST00000568848 ZBTB47Q9UFB7 747 aaPredicted RBP17.31■□□□□ 0.36
USB1-214ENST00000568848 MRPL11Q9Y3B7 192 aaKnown RBP17.31■□□□□ 0.36
USB1-214ENST00000568848 GRXCR2A6NFK2 248 aa17.3■□□□□ 0.36
USB1-214ENST00000568848 AMHP03971 560 aa17.3■□□□□ 0.36
USB1-214ENST00000568848 SMIM10L2AP0DMW4 78 aa17.3■□□□□ 0.36
USB1-214ENST00000568848 SMIM10L2BP0DMW5 78 aa17.3■□□□□ 0.36
USB1-214ENST00000568848 RRP1P56182 461 aaKnown RBP17.3■□□□□ 0.36
USB1-214ENST00000568848 HTRA4P83105 476 aaPredicted RBP17.3■□□□□ 0.36
USB1-214ENST00000568848 SP4Q02446 784 aa17.3■□□□□ 0.36
USB1-214ENST00000568848 PGM5Q15124 567 aa17.3■□□□□ 0.36
USB1-214ENST00000568848 ASPRV1Q53RT3 343 aa17.3■□□□□ 0.36
USB1-214ENST00000568848 PLEKHG4Q58EX7 1191 aa17.3■□□□□ 0.36
USB1-214ENST00000568848 MCF2L2Q86YR7 1114 aa17.3■□□□□ 0.36
USB1-214ENST00000568848 ATP6V0A1Q93050 837 aa17.3■□□□□ 0.36
USB1-214ENST00000568848 KATNAL1Q9BW62 490 aa17.3■□□□□ 0.36
USB1-214ENST00000568848 RNF41Q9H4P4 317 aaPredicted RBP17.3■□□□□ 0.36
USB1-214ENST00000568848 PNMA2Q9UL42 364 aa17.3■□□□□ 0.36
USB1-214ENST00000568848 LGALS2P05162 132 aa17.29■□□□□ 0.36
USB1-214ENST00000568848 HOXD8P13378 290 aaPredicted RBP17.29■□□□□ 0.36
USB1-214ENST00000568848 GTF2F1P35269 517 aaKnown RBP eCLIP17.29■□□□□ 0.36
USB1-214ENST00000568848 DLX2Q07687 328 aaPredicted RBP17.29■□□□□ 0.36
USB1-214ENST00000568848 GPM6BQ13491 265 aa17.29■□□□□ 0.36
USB1-214ENST00000568848 SP7Q8TDD2 431 aaPredicted RBP17.29■□□□□ 0.36
USB1-214ENST00000568848 ZBTB10Q96DT7 871 aa17.29■□□□□ 0.36
USB1-214ENST00000568848 MRPL38Q96DV4 380 aaKnown RBP17.29■□□□□ 0.36
USB1-214ENST00000568848 YME1L1Q96TA2 773 aa17.29■□□□□ 0.36
USB1-214ENST00000568848 SETD4Q9NVD3 440 aa17.29■□□□□ 0.36
USB1-214ENST00000568848 INSL6Q9Y581 213 aa17.29■□□□□ 0.36
USB1-214ENST00000568848 C17orf102A2RUQ5 167 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 117 ms