RNA–Protein interactions for RNA: ENST00000568239.1

SMG1-215, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 2,978 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-215ENST00000568239 PAK1Q13153 545 aa7.91□□□□□ -1.14
SMG1-215ENST00000568239 STIM1Q13586 685 aa7.91□□□□□ -1.14
SMG1-215ENST00000568239 CCDC144BQ3MJ40 725 aa7.91□□□□□ -1.14
SMG1-215ENST00000568239 CEP55Q53EZ4 464 aa7.91□□□□□ -1.14
SMG1-215ENST00000568239 LRCH2Q5VUJ6 765 aa7.91□□□□□ -1.14
SMG1-215ENST00000568239 POTEGQ6S5H5 508 aa7.91□□□□□ -1.14
SMG1-215ENST00000568239 POTEEQ6S8J3 1075 aa7.91□□□□□ -1.14
SMG1-215ENST00000568239 GADL1Q6ZQY3 521 aa7.91□□□□□ -1.14
SMG1-215ENST00000568239 USP50Q70EL3 339 aaPredicted RBP7.91□□□□□ -1.14
SMG1-215ENST00000568239 TMC6Q7Z403 805 aa7.91□□□□□ -1.14
SMG1-215ENST00000568239 NELFBQ8WX92 580 aa7.91□□□□□ -1.14
SMG1-215ENST00000568239 CDCA5Q96FF9 252 aa7.91□□□□□ -1.14
SMG1-215ENST00000568239 CLMNQ96JQ2 1002 aa7.91□□□□□ -1.14
SMG1-215ENST00000568239 PURBQ96QR8 312 aaKnown RBP7.91□□□□□ -1.14
SMG1-215ENST00000568239 MED15Q96RN5 788 aa7.91□□□□□ -1.14
SMG1-215ENST00000568239 ZNF577Q9BSK1 485 aa7.91□□□□□ -1.14
SMG1-215ENST00000568239 ZHX3Q9H4I2 956 aa7.91□□□□□ -1.14
SMG1-215ENST00000568239 RNF146Q9NTX7 359 aa7.91□□□□□ -1.14
SMG1-215ENST00000568239 KDM3AQ9Y4C1 1321 aa7.91□□□□□ -1.14
SMG1-215ENST00000568239 KLRC4O43908 158 aa7.9□□□□□ -1.14
SMG1-215ENST00000568239 GAS7O60861 476 aa7.9□□□□□ -1.14
SMG1-215ENST00000568239 KRT18P05783 430 aaKnown RBP7.9□□□□□ -1.14
SMG1-215ENST00000568239 ARP10275 920 aa7.9□□□□□ -1.14
SMG1-215ENST00000568239 FCER1AP12319 257 aa7.9□□□□□ -1.14
SMG1-215ENST00000568239 DSG3P32926 999 aa7.9□□□□□ -1.14
SMG1-215ENST00000568239 HSD17B4P51659 736 aa7.9□□□□□ -1.14
SMG1-215ENST00000568239 CACNB1Q02641 598 aaPredicted RBP7.9□□□□□ -1.14
SMG1-215ENST00000568239 NOL9Q5SY16 702 aaKnown RBP7.9□□□□□ -1.14
SMG1-215ENST00000568239 SPATA1Q5VX52 437 aa7.9□□□□□ -1.14
SMG1-215ENST00000568239 CATSPERGQ6ZRH7 1159 aa7.9□□□□□ -1.14
SMG1-215ENST00000568239 CATSPER3Q86XQ3 398 aa7.9□□□□□ -1.14
SMG1-215ENST00000568239 DDX12PQ92771 950 aa7.9□□□□□ -1.14
SMG1-215ENST00000568239 EEF2KMTQ96G04 330 aa7.9□□□□□ -1.14
SMG1-215ENST00000568239 TAAR1Q96RJ0 339 aa7.9□□□□□ -1.14
SMG1-215ENST00000568239 SLC39A2Q9NP94 309 aa7.9□□□□□ -1.14
SMG1-215ENST00000568239 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.9□□□□□ -1.14
SMG1-215ENST00000568239 IGLV3-22A0A075B6J6 115 aa7.9□□□□□ -1.15
SMG1-215ENST00000568239 TRIM49BA6NDI0 452 aa7.9□□□□□ -1.15
SMG1-215ENST00000568239 IRF6O14896 467 aa7.9□□□□□ -1.15
SMG1-215ENST00000568239 CBFA2T2O43439 604 aa7.9□□□□□ -1.15
SMG1-215ENST00000568239 GRIN3BO60391 1043 aa7.9□□□□□ -1.15
SMG1-215ENST00000568239 RHOBTB3O94955 611 aa7.9□□□□□ -1.15
SMG1-215ENST00000568239 TPM3P06753 285 aa7.9□□□□□ -1.15
SMG1-215ENST00000568239 CDC25BP30305 580 aa7.9□□□□□ -1.15
SMG1-215ENST00000568239 LRMPQ12912 555 aa7.9□□□□□ -1.15
SMG1-215ENST00000568239 STK4Q13043 487 aa7.9□□□□□ -1.15
SMG1-215ENST00000568239 TREML2Q5T2D2 321 aa7.9□□□□□ -1.15
SMG1-215ENST00000568239 ARHGEF16Q5VV41 709 aa7.9□□□□□ -1.15
SMG1-215ENST00000568239 IL31RAQ8NI17 732 aa7.9□□□□□ -1.15
SMG1-215ENST00000568239 RBM46Q8TBY0 533 aaKnown RBP7.9□□□□□ -1.15
SMG1-215ENST00000568239 SYTL5Q8TDW5 730 aaPredicted RBP7.9□□□□□ -1.15
SMG1-215ENST00000568239 NAP1L5Q96NT1 182 aaPredicted RBP7.9□□□□□ -1.15
SMG1-215ENST00000568239 RMDN3Q96TC7 470 aa7.9□□□□□ -1.15
SMG1-215ENST00000568239 C7orf25Q9BPX7 421 aa7.9□□□□□ -1.15
SMG1-215ENST00000568239 BMP2KQ9NSY1 1161 aaPredicted RBP7.9□□□□□ -1.15
SMG1-215ENST00000568239 HOXC10Q9NYD6 342 aa7.9□□□□□ -1.15
SMG1-215ENST00000568239 RGL1Q9NZL6 768 aa7.9□□□□□ -1.15
SMG1-215ENST00000568239 PSMA7O14818 248 aa7.89□□□□□ -1.15
SMG1-215ENST00000568239 PEX10O60683 326 aa7.89□□□□□ -1.15
SMG1-215ENST00000568239 PLA2G4BP0C869 781 aa7.89□□□□□ -1.15
SMG1-215ENST00000568239 FDX1P10109 184 aa7.89□□□□□ -1.15
SMG1-215ENST00000568239 SPIRE1Q08AE8 756 aa7.89□□□□□ -1.15
SMG1-215ENST00000568239 PABPC4Q13310 644 aaKnown RBP eCLIP7.89□□□□□ -1.15
SMG1-215ENST00000568239 BAATQ14032 418 aaPredicted RBP7.89□□□□□ -1.15
SMG1-215ENST00000568239 KCNB1Q14721 858 aa7.89□□□□□ -1.15
SMG1-215ENST00000568239 ARID5BQ14865 1188 aa7.89□□□□□ -1.15
SMG1-215ENST00000568239 TMEM132BQ14DG7 1078 aa7.89□□□□□ -1.15
SMG1-215ENST00000568239 TMEM119Q4V9L6 283 aa7.89□□□□□ -1.15
SMG1-215ENST00000568239 TRMT1LQ7Z2T5 733 aaKnown RBP7.89□□□□□ -1.15
SMG1-215ENST00000568239 TPH2Q8IWU9 490 aa7.89□□□□□ -1.15
SMG1-215ENST00000568239 ANKRD13AQ8IZ07 590 aa7.89□□□□□ -1.15
SMG1-215ENST00000568239 C17orf53Q8N3J3 647 aaPredicted RBP7.89□□□□□ -1.15
SMG1-215ENST00000568239 L3MBTL3Q96JM7 780 aaPredicted RBP7.89□□□□□ -1.15
SMG1-215ENST00000568239 C12orf42Q96LP6 360 aa7.89□□□□□ -1.15
SMG1-215ENST00000568239 WDR11Q9BZH6 1224 aa7.89□□□□□ -1.15
SMG1-215ENST00000568239 TAF1DQ9H5J8 278 aaPredicted RBP7.89□□□□□ -1.15
SMG1-215ENST00000568239 TESPA1A2RU30 521 aaPredicted RBP7.89□□□□□ -1.15
SMG1-215ENST00000568239 IQCA1LA6NCM1 817 aa7.89□□□□□ -1.15
SMG1-215ENST00000568239 IPO5O00410 1097 aaKnown RBP7.89□□□□□ -1.15
SMG1-215ENST00000568239 EML1O00423 815 aa7.89□□□□□ -1.15
SMG1-215ENST00000568239 ITGB5P18084 799 aa7.89□□□□□ -1.15
SMG1-215ENST00000568239 PSMC6P62333 389 aa7.89□□□□□ -1.15
SMG1-215ENST00000568239 CTTNQ14247 550 aaKnown RBP7.89□□□□□ -1.15
SMG1-215ENST00000568239 CNNM4Q6P4Q7 775 aa7.89□□□□□ -1.15
SMG1-215ENST00000568239 TRIM47Q96LD4 638 aa7.89□□□□□ -1.15
SMG1-215ENST00000568239 MXRA8Q9BRK3 442 aa7.89□□□□□ -1.15
SMG1-215ENST00000568239 LRRC27Q9C0I9 530 aa7.89□□□□□ -1.15
SMG1-215ENST00000568239 KCNF1Q9H3M0 494 aa7.89□□□□□ -1.15
SMG1-215ENST00000568239 TBC1D7Q9P0N9 293 aa7.89□□□□□ -1.15
SMG1-215ENST00000568239 RWDD2AQ9UIY3 292 aa7.89□□□□□ -1.15
SMG1-215ENST00000568239 DNM3Q9UQ16 869 aa7.89□□□□□ -1.15
SMG1-215ENST00000568239 SAMM50Q9Y512 469 aa7.89□□□□□ -1.15
SMG1-215ENST00000568239 COL11A1P12107 1806 aaPredicted RBP7.89□□□□□ -1.15
SMG1-215ENST00000568239 NPHP3-ACAD11A0A0J9YXS1 232 aa7.89□□□□□ -1.15
SMG1-215ENST00000568239 SPDYE16A6NNV3 312 aaPredicted RBP7.89□□□□□ -1.15
SMG1-215ENST00000568239 PES1O00541 588 aaKnown RBP7.89□□□□□ -1.15
SMG1-215ENST00000568239 RPA1P27694 616 aa7.89□□□□□ -1.15
SMG1-215ENST00000568239 SETQ01105 290 aaPredicted RBP7.89□□□□□ -1.15
SMG1-215ENST00000568239 CT47A1Q5JQC4 288 aaPredicted RBP7.89□□□□□ -1.15
SMG1-215ENST00000568239 MAP1SQ66K74 1059 aaPredicted RBP7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms