RNA–Protein interactions for RNA: ENST00000567549.2

LINC01238-205, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

BASIC

Gene LINC01238, Length 1,107 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-205ENST00000567549 TRIP12Q14669 1992 aaPredicted RBP21.5■■□□□ 1.03
LINC01238-205ENST00000567549 EMSYQ7Z589 1322 aa21.5■■□□□ 1.03
LINC01238-205ENST00000567549 OPLAHO14841 1288 aa21.49■■□□□ 1.03
LINC01238-205ENST00000567549 GGPS1O95749 300 aa21.49■■□□□ 1.03
LINC01238-205ENST00000567549 HOXD8P13378 290 aaPredicted RBP21.49■■□□□ 1.03
LINC01238-205ENST00000567549 MCM5P33992 734 aa21.49■■□□□ 1.03
LINC01238-205ENST00000567549 RABGGTBP53611 331 aa21.49■■□□□ 1.03
LINC01238-205ENST00000567549 MYSM1Q5VVJ2 828 aa21.49■■□□□ 1.03
LINC01238-205ENST00000567549 CNKSR3Q6P9H4 555 aa21.49■■□□□ 1.03
LINC01238-205ENST00000567549 NFXL1Q6ZNB6 911 aa21.49■■□□□ 1.03
LINC01238-205ENST00000567549 FCHSD1Q86WN1 690 aa21.49■■□□□ 1.03
LINC01238-205ENST00000567549 SMARCC2Q8TAQ2 1214 aa21.49■■□□□ 1.03
LINC01238-205ENST00000567549 KAT2BQ92831 832 aa21.49■■□□□ 1.03
LINC01238-205ENST00000567549 TMEM87BQ96K49 555 aa21.49■■□□□ 1.03
LINC01238-205ENST00000567549 SPZ1Q9BXG8 430 aa21.49■■□□□ 1.03
LINC01238-205ENST00000567549 HDAC6Q9UBN7 1215 aa21.49■■□□□ 1.03
LINC01238-205ENST00000567549 ABHD14A-ACY1A0A1B0GW23 586 aa21.48■■□□□ 1.03
LINC01238-205ENST00000567549 CCDC69A6NI79 296 aa21.48■■□□□ 1.03
LINC01238-205ENST00000567549 PPP1R11O60927 126 aaPredicted RBP21.48■■□□□ 1.03
LINC01238-205ENST00000567549 GNAT1P11488 350 aa21.48■■□□□ 1.03
LINC01238-205ENST00000567549 MRPS5P82675 430 aaKnown RBP21.48■■□□□ 1.03
LINC01238-205ENST00000567549 HERC6Q8IVU3 1022 aa21.48■■□□□ 1.03
LINC01238-205ENST00000567549 GIMAP8Q8ND71 665 aaPredicted RBP21.48■■□□□ 1.03
LINC01238-205ENST00000567549 ZBED2Q9BTP6 218 aa21.48■■□□□ 1.03
LINC01238-205ENST00000567549 USP26Q9BXU7 913 aa21.48■■□□□ 1.03
LINC01238-205ENST00000567549 GTF3C3Q9Y5Q9 886 aa21.48■■□□□ 1.03
LINC01238-205ENST00000567549 RBM8AQ9Y5S9 174 aaKnown RBP21.48■■□□□ 1.03
LINC01238-205ENST00000567549 CDH23Q9H251 3354 aa21.47■■□□□ 1.03
LINC01238-205ENST00000567549 HAS3O00219 553 aa21.47■■□□□ 1.03
LINC01238-205ENST00000567549 TLL1O43897 1013 aa21.47■■□□□ 1.03
LINC01238-205ENST00000567549 CA3P07451 260 aa21.47■■□□□ 1.03
LINC01238-205ENST00000567549 CKBP12277 381 aa21.47■■□□□ 1.03
LINC01238-205ENST00000567549 IKBKEQ14164 716 aa21.47■■□□□ 1.03
LINC01238-205ENST00000567549 ZNF215Q9UL58 517 aaPredicted RBP21.47■■□□□ 1.03
LINC01238-205ENST00000567549 BAZ2BQ9UIF8 2168 aaKnown RBP21.47■■□□□ 1.03
LINC01238-205ENST00000567549 FIBPO43427 364 aa21.46■■□□□ 1.03
LINC01238-205ENST00000567549 ZNF286BP0CG31 522 aa21.46■■□□□ 1.03
LINC01238-205ENST00000567549 UBA1P22314 1058 aaKnown RBP21.46■■□□□ 1.03
LINC01238-205ENST00000567549 RNF20Q5VTR2 975 aa21.46■■□□□ 1.03
LINC01238-205ENST00000567549 NLRX1Q86UT6 975 aa21.46■■□□□ 1.03
LINC01238-205ENST00000567549 MB21D2Q8IYB1 491 aaPredicted RBP21.46■■□□□ 1.03
LINC01238-205ENST00000567549 ZNF654Q8IZM8 581 aa21.46■■□□□ 1.03
LINC01238-205ENST00000567549 USP38Q8NB14 1042 aa21.46■■□□□ 1.03
LINC01238-205ENST00000567549 IGDCC4Q8TDY8 1250 aa21.46■■□□□ 1.03
LINC01238-205ENST00000567549 CDHR1Q96JP9 859 aa21.46■■□□□ 1.03
LINC01238-205ENST00000567549 CAND2O75155 1236 aa21.45■■□□□ 1.02
LINC01238-205ENST00000567549 CXCL10P02778 98 aa21.45■■□□□ 1.02
LINC01238-205ENST00000567549 ICAM3P32942 547 aa21.45■■□□□ 1.02
LINC01238-205ENST00000567549 SYNE3Q6ZMZ3 975 aa21.45■■□□□ 1.02
LINC01238-205ENST00000567549 VWCEQ96DN2 955 aa21.45■■□□□ 1.02
LINC01238-205ENST00000567549 FRMPD4Q14CM0 1322 aa21.45■■□□□ 1.02
LINC01238-205ENST00000567549 EYSQ5T1H1 3165 aa21.44■■□□□ 1.02
LINC01238-205ENST00000567549 C17orf102A2RUQ5 167 aa21.44■■□□□ 1.02
LINC01238-205ENST00000567549 H3BRB1 525 aa21.44■■□□□ 1.02
LINC01238-205ENST00000567549 PRC1O43663 620 aa21.44■■□□□ 1.02
LINC01238-205ENST00000567549 CYTH3O43739 400 aa21.44■■□□□ 1.02
LINC01238-205ENST00000567549 RGS20O76081 388 aa21.44■■□□□ 1.02
LINC01238-205ENST00000567549 POU3F3P20264 500 aaPredicted RBP21.44■■□□□ 1.02
LINC01238-205ENST00000567549 ADGRE1Q14246 886 aa21.44■■□□□ 1.02
LINC01238-205ENST00000567549 CCDC85BQ15834 202 aaPredicted RBP21.44■■□□□ 1.02
LINC01238-205ENST00000567549 HSDL1Q3SXM5 330 aa21.44■■□□□ 1.02
LINC01238-205ENST00000567549 METTL7BQ6UX53 244 aa21.44■■□□□ 1.02
LINC01238-205ENST00000567549 TEX2Q8IWB9 1127 aa21.44■■□□□ 1.02
LINC01238-205ENST00000567549 INPP4AQ96PE3 977 aaPredicted RBP21.44■■□□□ 1.02
LINC01238-205ENST00000567549 ASB2Q96Q27 587 aa21.44■■□□□ 1.02
LINC01238-205ENST00000567549 TUT1Q9H6E5 874 aaKnown RBP21.44■■□□□ 1.02
LINC01238-205ENST00000567549 EHMT1Q9H9B1 1298 aa21.44■■□□□ 1.02
LINC01238-205ENST00000567549 PRUNE2Q8WUY3 3088 aa21.44■■□□□ 1.02
LINC01238-205ENST00000567549 PIK3CDO00329 1044 aa21.43■■□□□ 1.02
LINC01238-205ENST00000567549 MYOGP15173 224 aa21.43■■□□□ 1.02
LINC01238-205ENST00000567549 LIFRP42702 1097 aa21.43■■□□□ 1.02
LINC01238-205ENST00000567549 WDR5P61964 334 aaKnown RBP21.43■■□□□ 1.02
LINC01238-205ENST00000567549 PCNX4Q63HM2 1172 aa21.43■■□□□ 1.02
LINC01238-205ENST00000567549 PPP1R13LQ8WUF5 828 aa21.43■■□□□ 1.02
LINC01238-205ENST00000567549 SENP7Q9BQF6 1050 aa21.43■■□□□ 1.02
LINC01238-205ENST00000567549 LY9Q9HBG7 655 aa21.43■■□□□ 1.02
LINC01238-205ENST00000567549 SLC12A7Q9Y666 1083 aa21.43■■□□□ 1.02
LINC01238-205ENST00000567549 SKIV2LQ15477 1246 aaKnown RBP21.42■■□□□ 1.02
LINC01238-205ENST00000567549 MICALL1Q8N3F8 863 aa21.42■■□□□ 1.02
LINC01238-205ENST00000567549 IL31RAQ8NI17 732 aa21.42■■□□□ 1.02
LINC01238-205ENST00000567549 ATP6V0A1Q93050 837 aa21.42■■□□□ 1.02
LINC01238-205ENST00000567549 TET1Q8NFU7 2136 aa21.41■■□□□ 1.02
LINC01238-205ENST00000567549 RSPH10B2B2RC85 870 aa21.41■■□□□ 1.02
LINC01238-205ENST00000567549 SPATA31C2B4DYI2 1134 aa21.41■■□□□ 1.02
LINC01238-205ENST00000567549 TNFRSF10AO00220 468 aa21.41■■□□□ 1.02
LINC01238-205ENST00000567549 LGALS2P05162 132 aa21.41■■□□□ 1.02
LINC01238-205ENST00000567549 RSPH10BP0C881 870 aa21.41■■□□□ 1.02
LINC01238-205ENST00000567549 ANTXR2P58335 489 aa21.41■■□□□ 1.02
LINC01238-205ENST00000567549 SERINC5Q86VE9 423 aa21.41■■□□□ 1.02
LINC01238-205ENST00000567549 PIBF1Q8WXW3 757 aa21.41■■□□□ 1.02
LINC01238-205ENST00000567549 DHX38Q92620 1227 aaKnown RBP21.41■■□□□ 1.02
LINC01238-205ENST00000567549 CTAGE1Q96RT6 745 aa21.41■■□□□ 1.02
LINC01238-205ENST00000567549 RAD9AQ99638 391 aa21.41■■□□□ 1.02
LINC01238-205ENST00000567549 C16orf70Q9BSU1 422 aa21.41■■□□□ 1.02
LINC01238-205ENST00000567549 COG5Q9UP83 839 aa21.41■■□□□ 1.02
LINC01238-205ENST00000567549 LGR5O75473 907 aa21.4■■□□□ 1.02
LINC01238-205ENST00000567549 AMHP03971 560 aa21.4■■□□□ 1.02
LINC01238-205ENST00000567549 THPOP40225 353 aa21.4■■□□□ 1.02
LINC01238-205ENST00000567549 TAP1Q03518 808 aa21.4■■□□□ 1.02
LINC01238-205ENST00000567549 ZNF618Q5T7W0 954 aa21.4■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms