RNA–Protein interactions for RNA: ENST00000567071.5

CAPN3-216, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-216ENST00000567071 CASTP20810 708 aaKnown RBP11.54□□□□□ -0.56
CAPN3-216ENST00000567071 PDE4DQ08499 809 aa11.54□□□□□ -0.56
CAPN3-216ENST00000567071 OS9Q13438 667 aaPredicted RBP11.54□□□□□ -0.56
CAPN3-216ENST00000567071 MBTPS1Q14703 1052 aa11.54□□□□□ -0.56
CAPN3-216ENST00000567071 NAALADL2Q58DX5 795 aa11.54□□□□□ -0.56
CAPN3-216ENST00000567071 TNNI3KQ59H18 835 aa11.54□□□□□ -0.56
CAPN3-216ENST00000567071 C16orf86Q6ZW13 317 aa11.54□□□□□ -0.56
CAPN3-216ENST00000567071 SPDYE1Q8NFV5 336 aaPredicted RBP11.54□□□□□ -0.56
CAPN3-216ENST00000567071 CLP1Q92989 425 aaKnown RBP11.54□□□□□ -0.56
CAPN3-216ENST00000567071 P2RX5Q93086 422 aa11.54□□□□□ -0.56
CAPN3-216ENST00000567071 RTKNQ9BST9 563 aa11.54□□□□□ -0.56
CAPN3-216ENST00000567071 TLE6Q9H808 572 aa11.54□□□□□ -0.56
CAPN3-216ENST00000567071 NYAP2Q9P242 653 aa11.54□□□□□ -0.56
CAPN3-216ENST00000567071 NCDNQ9UBB6 729 aa11.54□□□□□ -0.56
CAPN3-216ENST00000567071 PLAGL2Q9UPG8 496 aa11.54□□□□□ -0.56
CAPN3-216ENST00000567071 FPGT-TNNI3KV9GXZ4 949 aa11.54□□□□□ -0.56
CAPN3-216ENST00000567071 MYH4Q9Y623 1939 aa11.54□□□□□ -0.56
CAPN3-216ENST00000567071 BAZ2AQ9UIF9 1905 aaKnown RBP11.53□□□□□ -0.56
CAPN3-216ENST00000567071 GNAI3P08754 354 aa11.53□□□□□ -0.56
CAPN3-216ENST00000567071 TXNP10599 105 aaKnown RBP11.53□□□□□ -0.56
CAPN3-216ENST00000567071 RFX1P22670 979 aa11.53□□□□□ -0.56
CAPN3-216ENST00000567071 THPOP40225 353 aa11.53□□□□□ -0.56
CAPN3-216ENST00000567071 ALDH5A1P51649 535 aaPredicted RBP11.53□□□□□ -0.56
CAPN3-216ENST00000567071 STAT2P52630 851 aa11.53□□□□□ -0.56
CAPN3-216ENST00000567071 LMNB2Q03252 620 aa11.53□□□□□ -0.56
CAPN3-216ENST00000567071 MTX1Q13505 466 aa11.53□□□□□ -0.56
CAPN3-216ENST00000567071 BTG3Q14201 252 aaPredicted RBP11.53□□□□□ -0.56
CAPN3-216ENST00000567071 ADGRD2Q7Z7M1 963 aa11.53□□□□□ -0.56
CAPN3-216ENST00000567071 RPAP2Q8IXW5 612 aaPredicted RBP11.53□□□□□ -0.56
CAPN3-216ENST00000567071 DHX37Q8IY37 1157 aaKnown RBP11.53□□□□□ -0.56
CAPN3-216ENST00000567071 DCLK2Q8N568 766 aa11.53□□□□□ -0.56
CAPN3-216ENST00000567071 CHURC1Q8WUH1 139 aa11.53□□□□□ -0.56
CAPN3-216ENST00000567071 APBB2Q92870 758 aa11.53□□□□□ -0.56
CAPN3-216ENST00000567071 SECISBP2LQ93073 1101 aaKnown RBP11.53□□□□□ -0.56
CAPN3-216ENST00000567071 CDCA3Q99618 268 aaPredicted RBP11.53□□□□□ -0.56
CAPN3-216ENST00000567071 ATP8A2Q9NTI2 1148 aa11.53□□□□□ -0.56
CAPN3-216ENST00000567071 HDAC6Q9UBN7 1215 aa11.53□□□□□ -0.56
CAPN3-216ENST00000567071 SOBPA7XYQ1 873 aa11.52□□□□□ -0.57
CAPN3-216ENST00000567071 B4DLN1 442 aa11.52□□□□□ -0.57
CAPN3-216ENST00000567071 MRPL12P52815 198 aaKnown RBP11.52□□□□□ -0.57
CAPN3-216ENST00000567071 IRX6P78412 446 aaPredicted RBP11.52□□□□□ -0.57
CAPN3-216ENST00000567071 COL9A3Q14050 684 aaPredicted RBP11.52□□□□□ -0.57
CAPN3-216ENST00000567071 TRIM71Q2Q1W2 868 aaKnown RBP11.52□□□□□ -0.57
CAPN3-216ENST00000567071 ALDH1L2Q3SY69 923 aa11.52□□□□□ -0.57
CAPN3-216ENST00000567071 CWF19L1Q69YN2 538 aaKnown RBP11.52□□□□□ -0.57
CAPN3-216ENST00000567071 TRAF7Q6Q0C0 670 aa11.52□□□□□ -0.57
CAPN3-216ENST00000567071 FAM160B2Q86V87 743 aa11.52□□□□□ -0.57
CAPN3-216ENST00000567071 MICAL1Q8TDZ2 1067 aa11.52□□□□□ -0.57
CAPN3-216ENST00000567071 FRAT1Q92837 279 aaPredicted RBP11.52□□□□□ -0.57
CAPN3-216ENST00000567071 ALG1Q9BT22 464 aa11.52□□□□□ -0.57
CAPN3-216ENST00000567071 LCTP09848 1927 aa11.51□□□□□ -0.57
CAPN3-216ENST00000567071 CEP295Q9C0D2 2601 aa11.51□□□□□ -0.57
CAPN3-216ENST00000567071 DCDC2BA2VCK2 349 aa11.51□□□□□ -0.57
CAPN3-216ENST00000567071 STK25O00506 426 aa11.51□□□□□ -0.57
CAPN3-216ENST00000567071 MMP3P08254 477 aa11.51□□□□□ -0.57
CAPN3-216ENST00000567071 BMP3P12645 472 aa11.51□□□□□ -0.57
CAPN3-216ENST00000567071 HOXB3P14651 431 aaPredicted RBP11.51□□□□□ -0.57
CAPN3-216ENST00000567071 PSEN2P49810 448 aa11.51□□□□□ -0.57
CAPN3-216ENST00000567071 TTF1Q15361 905 aaPredicted RBP11.51□□□□□ -0.57
CAPN3-216ENST00000567071 DGKDQ16760 1214 aa11.51□□□□□ -0.57
CAPN3-216ENST00000567071 SLC9C2Q5TAH2 1124 aa11.51□□□□□ -0.57
CAPN3-216ENST00000567071 C12orf60Q5U649 245 aa11.51□□□□□ -0.57
CAPN3-216ENST00000567071 AFG1LQ8WV93 481 aa11.51□□□□□ -0.57
CAPN3-216ENST00000567071 POF1BQ8WVV4 589 aa11.51□□□□□ -0.57
CAPN3-216ENST00000567071 COPS5Q92905 334 aa11.51□□□□□ -0.57
CAPN3-216ENST00000567071 MEIS3Q99687 375 aa11.51□□□□□ -0.57
CAPN3-216ENST00000567071 CLIP2Q9UDT6 1046 aa11.51□□□□□ -0.57
CAPN3-216ENST00000567071 FBXL21Q9UKT6 434 aa11.51□□□□□ -0.57
CAPN3-216ENST00000567071 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.5□□□□□ -0.57
CAPN3-216ENST00000567071 TMEM232C9JQI7 657 aa11.5□□□□□ -0.57
CAPN3-216ENST00000567071 KINO60870 393 aaKnown RBP11.5□□□□□ -0.57
CAPN3-216ENST00000567071 GH1P01241 217 aa11.5□□□□□ -0.57
CAPN3-216ENST00000567071 CAMK1Q14012 370 aa11.5□□□□□ -0.57
CAPN3-216ENST00000567071 MUM1L1Q5H9M0 696 aa11.5□□□□□ -0.57
CAPN3-216ENST00000567071 SPPL3Q8TCT6 385 aa11.5□□□□□ -0.57
CAPN3-216ENST00000567071 NECTIN4Q96NY8 510 aa11.5□□□□□ -0.57
CAPN3-216ENST00000567071 ANGPTL2Q9UKU9 493 aa11.5□□□□□ -0.57
CAPN3-216ENST00000567071 CCPG1Q9ULG6 757 aa11.5□□□□□ -0.57
CAPN3-216ENST00000567071 SYNPO2Q9UMS6 1093 aa11.5□□□□□ -0.57
CAPN3-216ENST00000567071 FANCMQ8IYD8 2048 aa11.5□□□□□ -0.57
CAPN3-216ENST00000567071 MAST4O15021 2626 aa11.49□□□□□ -0.57
CAPN3-216ENST00000567071 GCN1Q92616 2671 aaKnown RBP11.49□□□□□ -0.57
CAPN3-216ENST00000567071 GREB1LQ9C091 1923 aaPredicted RBP11.49□□□□□ -0.57
CAPN3-216ENST00000567071 PTPDC1A2A3K4 754 aa11.49□□□□□ -0.57
CAPN3-216ENST00000567071 PI15O43692 258 aa11.49□□□□□ -0.57
CAPN3-216ENST00000567071 ITGB1P05556 798 aa11.49□□□□□ -0.57
CAPN3-216ENST00000567071 NEFLP07196 543 aa11.49□□□□□ -0.57
CAPN3-216ENST00000567071 LINC00271P0C7V0 271 aa11.49□□□□□ -0.57
CAPN3-216ENST00000567071 PDE6AP16499 860 aa11.49□□□□□ -0.57
CAPN3-216ENST00000567071 HOXB8P17481 243 aaPredicted RBP11.49□□□□□ -0.57
CAPN3-216ENST00000567071 TECP42680 631 aa11.49□□□□□ -0.57
CAPN3-216ENST00000567071 BAATQ14032 418 aaPredicted RBP11.49□□□□□ -0.57
CAPN3-216ENST00000567071 MFSD10Q14728 455 aa11.49□□□□□ -0.57
CAPN3-216ENST00000567071 CES5AQ6NT32 575 aa11.49□□□□□ -0.57
CAPN3-216ENST00000567071 LCORLQ8N3X6 602 aa11.49□□□□□ -0.57
CAPN3-216ENST00000567071 TDRD5Q8NAT2 981 aaKnown RBP11.49□□□□□ -0.57
CAPN3-216ENST00000567071 ATP8B4Q8TF62 1192 aa11.49□□□□□ -0.57
CAPN3-216ENST00000567071 RIN2Q8WYP3 895 aaPredicted RBP11.49□□□□□ -0.57
CAPN3-216ENST00000567071 KAT2BQ92831 832 aa11.49□□□□□ -0.57
CAPN3-216ENST00000567071 PURBQ96QR8 312 aaKnown RBP11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms