RNA–Protein interactions for RNA: ENST00000566400.5

BBS4-210, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 1 (best)

Gene BBS4, Length 2,055 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-210ENST00000566400 PANK4Q9NVE7 773 aa10.33□□□□□ -0.76
BBS4-210ENST00000566400 CALCOCO1Q9P1Z2 691 aa10.33□□□□□ -0.76
BBS4-210ENST00000566400 RNF14Q9UBS8 474 aa10.33□□□□□ -0.76
BBS4-210ENST00000566400 ATF5Q9Y2D1 282 aaPredicted RBP10.33□□□□□ -0.76
BBS4-210ENST00000566400 SIK3Q9Y2K2 1263 aa10.33□□□□□ -0.76
BBS4-210ENST00000566400 GREB1LQ9C091 1923 aaPredicted RBP10.33□□□□□ -0.76
BBS4-210ENST00000566400 RGPD3A6NKT7 1758 aaPredicted RBP10.32□□□□□ -0.76
BBS4-210ENST00000566400 RGPD4Q7Z3J3 1758 aa10.32□□□□□ -0.76
BBS4-210ENST00000566400 POTEMA6NI47 508 aa10.32□□□□□ -0.76
BBS4-210ENST00000566400 RIMBP2O15034 1052 aa10.32□□□□□ -0.76
BBS4-210ENST00000566400 TCP1P17987 556 aaKnown RBP10.32□□□□□ -0.76
BBS4-210ENST00000566400 CYP2C19P33261 490 aa10.32□□□□□ -0.76
BBS4-210ENST00000566400 EDRF1Q3B7T1 1238 aa10.32□□□□□ -0.76
BBS4-210ENST00000566400 CDC42EP5Q6NZY7 148 aa10.32□□□□□ -0.76
BBS4-210ENST00000566400 DYMQ7RTS9 669 aa10.32□□□□□ -0.76
BBS4-210ENST00000566400 EXOC4Q96A65 974 aa10.32□□□□□ -0.76
BBS4-210ENST00000566400 MASTLQ96GX5 879 aa10.32□□□□□ -0.76
BBS4-210ENST00000566400 MBOAT7Q96N66 472 aa10.32□□□□□ -0.76
BBS4-210ENST00000566400 IDI2Q9BXS1 227 aa10.32□□□□□ -0.76
BBS4-210ENST00000566400 IFIH1Q9BYX4 1025 aaKnown RBP10.32□□□□□ -0.76
BBS4-210ENST00000566400 ZSWIM4Q9H7M6 989 aa10.32□□□□□ -0.76
BBS4-210ENST00000566400 DDX4Q9NQI0 724 aaKnown RBP10.32□□□□□ -0.76
BBS4-210ENST00000566400 CEP72Q9P209 647 aa10.32□□□□□ -0.76
BBS4-210ENST00000566400 L1RE1Q9UN81 338 aa10.32□□□□□ -0.76
BBS4-210ENST00000566400 NRXN2Q9P2S2 1712 aa10.32□□□□□ -0.76
BBS4-210ENST00000566400 PJA2O43164 708 aa10.32□□□□□ -0.76
BBS4-210ENST00000566400 AKR1B10O60218 316 aa10.32□□□□□ -0.76
BBS4-210ENST00000566400 SLC1A4P43007 532 aa10.32□□□□□ -0.76
BBS4-210ENST00000566400 CRKP46108 304 aa10.32□□□□□ -0.76
BBS4-210ENST00000566400 USP14P54578 494 aa10.32□□□□□ -0.76
BBS4-210ENST00000566400 COASYQ13057 564 aa10.32□□□□□ -0.76
BBS4-210ENST00000566400 SLC9C1Q4G0N8 1177 aa10.32□□□□□ -0.76
BBS4-210ENST00000566400 CCDC40Q4G0X9 1142 aa10.32□□□□□ -0.76
BBS4-210ENST00000566400 LRRC55Q6ZSA7 311 aa10.32□□□□□ -0.76
BBS4-210ENST00000566400 TMEM179Q6ZVK1 233 aa10.32□□□□□ -0.76
BBS4-210ENST00000566400 GMCL1P1Q8NEA9 526 aa10.32□□□□□ -0.76
BBS4-210ENST00000566400 CAGE1Q8TC20 777 aa10.32□□□□□ -0.76
BBS4-210ENST00000566400 FAM20AQ96MK3 541 aa10.32□□□□□ -0.76
BBS4-210ENST00000566400 AMNQ9BXJ7 453 aa10.32□□□□□ -0.76
BBS4-210ENST00000566400 MMRN2Q9H8L6 949 aa10.32□□□□□ -0.76
BBS4-210ENST00000566400 A0A0U1RQJ8 604 aa10.31□□□□□ -0.76
BBS4-210ENST00000566400 RASSF10A6NK89 507 aa10.31□□□□□ -0.76
BBS4-210ENST00000566400 SASH3O75995 380 aa10.31□□□□□ -0.76
BBS4-210ENST00000566400 KIF11P52732 1056 aa10.31□□□□□ -0.76
BBS4-210ENST00000566400 CERKLQ49MI3 558 aaPredicted RBP10.31□□□□□ -0.76
BBS4-210ENST00000566400 ZCWPW2Q504Y3 356 aa10.31□□□□□ -0.76
BBS4-210ENST00000566400 STRIP1Q5VSL9 837 aa10.31□□□□□ -0.76
BBS4-210ENST00000566400 APOBEC3HQ6NTF7 200 aaKnown RBP10.31□□□□□ -0.76
BBS4-210ENST00000566400 ZNF572Q7Z3I7 529 aaPredicted RBP10.31□□□□□ -0.76
BBS4-210ENST00000566400 C2CD5Q86YS7 1000 aa10.31□□□□□ -0.76
BBS4-210ENST00000566400 ATRIPQ8WXE1 791 aa10.31□□□□□ -0.76
BBS4-210ENST00000566400 HAS1Q92839 578 aa10.31□□□□□ -0.76
BBS4-210ENST00000566400 DNAJC19Q96DA6 116 aa10.31□□□□□ -0.76
BBS4-210ENST00000566400 CAMKK2Q96RR4 588 aa10.31□□□□□ -0.76
BBS4-210ENST00000566400 MXD3Q9BW11 206 aa10.31□□□□□ -0.76
BBS4-210ENST00000566400 TANGO6Q9C0B7 1094 aa10.31□□□□□ -0.76
BBS4-210ENST00000566400 SH2D4AQ9H788 454 aa10.31□□□□□ -0.76
BBS4-210ENST00000566400 KCNMB3Q9NPA1 279 aa10.31□□□□□ -0.76
BBS4-210ENST00000566400 PCDHA13Q9Y5I0 950 aa10.31□□□□□ -0.76
BBS4-210ENST00000566400 PCDHA1Q9Y5I3 950 aa10.31□□□□□ -0.76
BBS4-210ENST00000566400 USP17L10C9JJH3 530 aa10.3□□□□□ -0.76
BBS4-210ENST00000566400 F8W031 263 aaPredicted RBP10.3□□□□□ -0.76
BBS4-210ENST00000566400 TRAF5O00463 557 aa10.3□□□□□ -0.76
BBS4-210ENST00000566400 RHOXF2BP0C7M4 288 aa10.3□□□□□ -0.76
BBS4-210ENST00000566400 EPS15P42566 896 aa10.3□□□□□ -0.76
BBS4-210ENST00000566400 EIF6P56537 245 aaKnown RBP10.3□□□□□ -0.76
BBS4-210ENST00000566400 ATP2B2Q01814 1243 aa10.3□□□□□ -0.76
BBS4-210ENST00000566400 Q4G0T1 1027 aa10.3□□□□□ -0.76
BBS4-210ENST00000566400 C10orf76Q5T2E6 689 aa10.3□□□□□ -0.76
BBS4-210ENST00000566400 SLFN13Q68D06 897 aa10.3□□□□□ -0.76
BBS4-210ENST00000566400 CERS5Q8N5B7 392 aa10.3□□□□□ -0.76
BBS4-210ENST00000566400 FAM71BQ8TC56 605 aa10.3□□□□□ -0.76
BBS4-210ENST00000566400 GMCL1Q96IK5 515 aa10.3□□□□□ -0.76
BBS4-210ENST00000566400 RHOXF2Q9BQY4 288 aa10.3□□□□□ -0.76
BBS4-210ENST00000566400 ANO3Q9BYT9 981 aa10.3□□□□□ -0.76
BBS4-210ENST00000566400 EPC1Q9H2F5 836 aa10.3□□□□□ -0.76
BBS4-210ENST00000566400 JADE2Q9NQC1 790 aa10.3□□□□□ -0.76
BBS4-210ENST00000566400 COL2A1P02458 1487 aaPredicted RBP10.3□□□□□ -0.76
BBS4-210ENST00000566400 SPDYE3A6NKU9 549 aa10.3□□□□□ -0.76
BBS4-210ENST00000566400 RBAK-RBAKDNI3L0D1 243 aa10.3□□□□□ -0.76
BBS4-210ENST00000566400 CETN3O15182 167 aa10.3□□□□□ -0.76
BBS4-210ENST00000566400 ATP1A1P05023 1023 aaKnown RBP10.3□□□□□ -0.76
BBS4-210ENST00000566400 SERPING1P05155 500 aa10.3□□□□□ -0.76
BBS4-210ENST00000566400 KRT18P05783 430 aaKnown RBP10.3□□□□□ -0.76
BBS4-210ENST00000566400 PLA2G4BP0C869 781 aa10.3□□□□□ -0.76
BBS4-210ENST00000566400 ANXA13P27216 316 aa10.3□□□□□ -0.76
BBS4-210ENST00000566400 PAFAH1B1P43034 410 aa10.3□□□□□ -0.76
BBS4-210ENST00000566400 UBE2SQ16763 222 aa10.3□□□□□ -0.76
BBS4-210ENST00000566400 QRICH1Q2TAL8 776 aa10.3□□□□□ -0.76
BBS4-210ENST00000566400 TATDN1Q6P1N9 297 aa10.3□□□□□ -0.76
BBS4-210ENST00000566400 PDXDC1Q6P996 788 aa10.3□□□□□ -0.76
BBS4-210ENST00000566400 ZC3H3Q8IXZ2 948 aaKnown RBP10.3□□□□□ -0.76
BBS4-210ENST00000566400 GOLGA6L1Q8N7Z2 621 aa10.3□□□□□ -0.76
BBS4-210ENST00000566400 CNKSR2Q8WXI2 1034 aa10.3□□□□□ -0.76
BBS4-210ENST00000566400 PNKPQ96T60 521 aa10.3□□□□□ -0.76
BBS4-210ENST00000566400 ABCB6Q9NP58 842 aa10.3□□□□□ -0.76
BBS4-210ENST00000566400 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.3□□□□□ -0.76
BBS4-210ENST00000566400 SERPINA10Q9UK55 444 aa10.3□□□□□ -0.76
BBS4-210ENST00000566400 SNX12Q9UMY4 172 aa10.3□□□□□ -0.76
BBS4-210ENST00000566400 HYOU1Q9Y4L1 999 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms