RNA–Protein interactions for RNA: ENST00000566370.1

LINC00563-201, long intergenic non-protein coding RNA 563, humanhuman

BASIC

Gene LINC00563, Length 1,400 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00563-201ENST00000566370 CYP3A4P08684 503 aa14.85□□□□□ -0.03
LINC00563-201ENST00000566370 CIITAP33076 1130 aa14.85□□□□□ -0.03
LINC00563-201ENST00000566370 FKBP3Q00688 224 aaKnown RBP14.85□□□□□ -0.03
LINC00563-201ENST00000566370 COASYQ13057 564 aa14.85□□□□□ -0.03
LINC00563-201ENST00000566370 PRR16Q569H4 304 aa14.85□□□□□ -0.03
LINC00563-201ENST00000566370 KIAA0895Q8NCT3 520 aa14.85□□□□□ -0.03
LINC00563-201ENST00000566370 EDEM3Q9BZQ6 932 aa14.85□□□□□ -0.03
LINC00563-201ENST00000566370 NUCKS1Q9H1E3 243 aaKnown RBP14.85□□□□□ -0.03
LINC00563-201ENST00000566370 HAUS4Q9H6D7 363 aa14.85□□□□□ -0.03
LINC00563-201ENST00000566370 VEZTQ9HBM0 779 aa14.85□□□□□ -0.03
LINC00563-201ENST00000566370 LZTFL1Q9NQ48 299 aa14.85□□□□□ -0.03
LINC00563-201ENST00000566370 GINM1Q9NU53 330 aa14.85□□□□□ -0.03
LINC00563-201ENST00000566370 ZBTB21Q9ULJ3 1066 aa14.85□□□□□ -0.03
LINC00563-201ENST00000566370 PRR12Q9ULL5 1215 aa14.85□□□□□ -0.03
LINC00563-201ENST00000566370 KIAA1024Q9UPX6 916 aa14.85□□□□□ -0.03
LINC00563-201ENST00000566370 EPN1Q9Y6I3 576 aaPredicted RBP14.85□□□□□ -0.03
LINC00563-201ENST00000566370 TTC26A0AVF1 554 aa14.84□□□□□ -0.03
LINC00563-201ENST00000566370 POTEB2H3BUK9 544 aa14.84□□□□□ -0.03
LINC00563-201ENST00000566370 GCOM1H8Y6P7 765 aaPredicted RBP14.84□□□□□ -0.03
LINC00563-201ENST00000566370 RAD17O75943 681 aa14.84□□□□□ -0.03
LINC00563-201ENST00000566370 POLR2MP0CAP2 368 aa14.84□□□□□ -0.03
LINC00563-201ENST00000566370 TNFAIP1Q13829 316 aa14.84□□□□□ -0.03
LINC00563-201ENST00000566370 CCDC40Q4G0X9 1142 aa14.84□□□□□ -0.03
LINC00563-201ENST00000566370 VWA3BQ502W6 1294 aa14.84□□□□□ -0.03
LINC00563-201ENST00000566370 NCAPH2Q6IBW4 605 aa14.84□□□□□ -0.03
LINC00563-201ENST00000566370 SIAH1Q8IUQ4 282 aa14.84□□□□□ -0.03
LINC00563-201ENST00000566370 LRRC15Q8TF66 581 aa14.84□□□□□ -0.03
LINC00563-201ENST00000566370 TSGA10Q9BZW7 698 aa14.84□□□□□ -0.03
LINC00563-201ENST00000566370 FEM1BQ9UK73 627 aa14.84□□□□□ -0.03
LINC00563-201ENST00000566370 CLRN2A0PK11 232 aa14.83□□□□□ -0.03
LINC00563-201ENST00000566370 KRT86O43790 486 aa14.83□□□□□ -0.03
LINC00563-201ENST00000566370 NDUFA10O95299 355 aa14.83□□□□□ -0.03
LINC00563-201ENST00000566370 ASNSP08243 561 aa14.83□□□□□ -0.03
LINC00563-201ENST00000566370 MUTP22033 750 aa14.83□□□□□ -0.03
LINC00563-201ENST00000566370 RPA1P27694 616 aa14.83□□□□□ -0.03
LINC00563-201ENST00000566370 MAP3K9P80192 1104 aa14.83□□□□□ -0.03
LINC00563-201ENST00000566370 CDK17Q00537 523 aa14.83□□□□□ -0.03
LINC00563-201ENST00000566370 PPP2R3AQ06190 1150 aa14.83□□□□□ -0.03
LINC00563-201ENST00000566370 TNIP1Q15025 636 aa14.83□□□□□ -0.03
LINC00563-201ENST00000566370 SPA17Q15506 151 aa14.83□□□□□ -0.03
LINC00563-201ENST00000566370 ELF2Q15723 593 aa14.83□□□□□ -0.03
LINC00563-201ENST00000566370 KIF4BQ2VIQ3 1234 aa14.83□□□□□ -0.03
LINC00563-201ENST00000566370 KIAA1328Q86T90 577 aa14.83□□□□□ -0.03
LINC00563-201ENST00000566370 JDP2Q8WYK2 163 aa14.83□□□□□ -0.03
LINC00563-201ENST00000566370 NDST4Q9H3R1 872 aa14.83□□□□□ -0.03
LINC00563-201ENST00000566370 SEMA6BQ9H3T3 888 aa14.83□□□□□ -0.03
LINC00563-201ENST00000566370 VCPKMTQ9H867 229 aa14.83□□□□□ -0.03
LINC00563-201ENST00000566370 LUC7LQ9NQ29 371 aaKnown RBP14.83□□□□□ -0.03
LINC00563-201ENST00000566370 FAM184BQ9ULE4 1060 aa14.83□□□□□ -0.03
LINC00563-201ENST00000566370 MRFAP1Q9Y605 127 aa14.83□□□□□ -0.03
LINC00563-201ENST00000566370 TBCAO75347 108 aaKnown RBP14.83□□□□□ -0.04
LINC00563-201ENST00000566370 EPS15P42566 896 aa14.83□□□□□ -0.04
LINC00563-201ENST00000566370 SETQ01105 290 aaPredicted RBP14.83□□□□□ -0.04
LINC00563-201ENST00000566370 EHHADHQ08426 723 aa14.83□□□□□ -0.04
LINC00563-201ENST00000566370 MTF1Q14872 753 aa14.83□□□□□ -0.04
LINC00563-201ENST00000566370 HERC4Q5GLZ8 1057 aaPredicted RBP14.83□□□□□ -0.04
LINC00563-201ENST00000566370 ZNF569Q5MCW4 686 aa14.83□□□□□ -0.04
LINC00563-201ENST00000566370 STXBP4Q6ZWJ1 553 aa14.83□□□□□ -0.04
LINC00563-201ENST00000566370 ETNPPLQ8TBG4 499 aa14.83□□□□□ -0.04
LINC00563-201ENST00000566370 GOLGA1Q92805 767 aa14.83□□□□□ -0.04
LINC00563-201ENST00000566370 GMLQ99445 158 aa14.83□□□□□ -0.04
LINC00563-201ENST00000566370 NAPGQ99747 312 aaPredicted RBP14.83□□□□□ -0.04
LINC00563-201ENST00000566370 POLR3CQ9BUI4 534 aaPredicted RBP14.83□□□□□ -0.04
LINC00563-201ENST00000566370 CARD6Q9BX69 1037 aa14.83□□□□□ -0.04
LINC00563-201ENST00000566370 TANGO6Q9C0B7 1094 aa14.83□□□□□ -0.04
LINC00563-201ENST00000566370 MRPL44Q9H9J2 332 aaKnown RBP14.83□□□□□ -0.04
LINC00563-201ENST00000566370 PIM2Q9P1W9 311 aa14.83□□□□□ -0.04
LINC00563-201ENST00000566370 COL4A3BPQ9Y5P4 624 aa14.83□□□□□ -0.04
LINC00563-201ENST00000566370 POTEB3A0JP26 581 aa14.82□□□□□ -0.04
LINC00563-201ENST00000566370 POTECB2RU33 542 aa14.82□□□□□ -0.04
LINC00563-201ENST00000566370 E9PMD0 336 aa14.82□□□□□ -0.04
LINC00563-201ENST00000566370 TRAF5O00463 557 aa14.82□□□□□ -0.04
LINC00563-201ENST00000566370 EDIL3O43854 480 aa14.82□□□□□ -0.04
LINC00563-201ENST00000566370 USO1O60763 962 aaKnown RBP14.82□□□□□ -0.04
LINC00563-201ENST00000566370 DPEP1P16444 411 aa14.82□□□□□ -0.04
LINC00563-201ENST00000566370 GAP43P17677 238 aa14.82□□□□□ -0.04
LINC00563-201ENST00000566370 TGFB2P61812 414 aa14.82□□□□□ -0.04
LINC00563-201ENST00000566370 ERVK-24P63145 666 aa14.82□□□□□ -0.04
LINC00563-201ENST00000566370 MEA1Q16626 185 aa14.82□□□□□ -0.04
LINC00563-201ENST00000566370 FAM83BQ5T0W9 1011 aa14.82□□□□□ -0.04
LINC00563-201ENST00000566370 CIAPIN1Q6FI81 312 aa14.82□□□□□ -0.04
LINC00563-201ENST00000566370 POTEBQ6S5H4 581 aa14.82□□□□□ -0.04
LINC00563-201ENST00000566370 ZNF662Q6ZS27 426 aa14.82□□□□□ -0.04
LINC00563-201ENST00000566370 KRT26Q7Z3Y9 468 aa14.82□□□□□ -0.04
LINC00563-201ENST00000566370 NEK11Q8NG66 645 aa14.82□□□□□ -0.04
LINC00563-201ENST00000566370 CRYGNQ8WXF5 182 aa14.82□□□□□ -0.04
LINC00563-201ENST00000566370 DNAJC19Q96DA6 116 aa14.82□□□□□ -0.04
LINC00563-201ENST00000566370 NUDT12Q9BQG2 462 aa14.82□□□□□ -0.04
LINC00563-201ENST00000566370 SLF1Q9BQI6 1058 aa14.82□□□□□ -0.04
LINC00563-201ENST00000566370 WDR11Q9BZH6 1224 aa14.82□□□□□ -0.04
LINC00563-201ENST00000566370 RANBP17Q9H2T7 1088 aaKnown RBP14.82□□□□□ -0.04
LINC00563-201ENST00000566370 TUFT1Q9NNX1 390 aa14.82□□□□□ -0.04
LINC00563-201ENST00000566370 ZNF277Q9NRM2 450 aaPredicted RBP14.82□□□□□ -0.04
LINC00563-201ENST00000566370 KIF13BQ9NQT8 1826 aa14.81□□□□□ -0.04
LINC00563-201ENST00000566370 EIF3CLB5ME19 914 aaKnown RBP14.81□□□□□ -0.04
LINC00563-201ENST00000566370 CETN3O15182 167 aa14.81□□□□□ -0.04
LINC00563-201ENST00000566370 CALUO43852 315 aaPredicted RBP14.81□□□□□ -0.04
LINC00563-201ENST00000566370 CFBP00751 764 aa14.81□□□□□ -0.04
LINC00563-201ENST00000566370 RPS12P25398 132 aaKnown RBP14.81□□□□□ -0.04
LINC00563-201ENST00000566370 POLD1P28340 1107 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms