RNA–Protein interactions for RNA: ENST00000565887.1

SHCBP1-204, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 5

Gene SHCBP1, Length 603 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-204ENST00000565887 RTEL1Q9NZ71 1219 aa14.35□□□□□ -0.11
SHCBP1-204ENST00000565887 DDX49Q9Y6V7 483 aaKnown RBP14.35□□□□□ -0.11
SHCBP1-204ENST00000565887 ELP1O95163 1332 aa14.35□□□□□ -0.11
SHCBP1-204ENST00000565887 KIAA1217Q5T5P2 1943 aa14.35□□□□□ -0.11
SHCBP1-204ENST00000565887 CCDC194A0A1B0GVG4 234 aa14.34□□□□□ -0.11
SHCBP1-204ENST00000565887 M0R2N6 131 aa14.34□□□□□ -0.11
SHCBP1-204ENST00000565887 MEIS1O00470 390 aa14.34□□□□□ -0.11
SHCBP1-204ENST00000565887 JAK2O60674 1132 aa14.34□□□□□ -0.11
SHCBP1-204ENST00000565887 PPFIA4O75335 1185 aa14.34□□□□□ -0.11
SHCBP1-204ENST00000565887 RGS20O76081 388 aa14.34□□□□□ -0.11
SHCBP1-204ENST00000565887 CIITAP33076 1130 aa14.34□□□□□ -0.11
SHCBP1-204ENST00000565887 KRT2P35908 639 aa14.34□□□□□ -0.11
SHCBP1-204ENST00000565887 ACLYP53396 1101 aa14.34□□□□□ -0.11
SHCBP1-204ENST00000565887 MTMR1Q13613 665 aa14.34□□□□□ -0.11
SHCBP1-204ENST00000565887 NONOQ15233 471 aaKnown RBP eCLIP14.34□□□□□ -0.11
SHCBP1-204ENST00000565887 CELF3Q5SZQ8 465 aaKnown RBP14.34□□□□□ -0.11
SHCBP1-204ENST00000565887 C1orf53Q5VUE5 145 aa14.34□□□□□ -0.11
SHCBP1-204ENST00000565887 CCSAPQ6IQ19 270 aaPredicted RBP14.34□□□□□ -0.11
SHCBP1-204ENST00000565887 C8orf76Q96K31 380 aa14.34□□□□□ -0.11
SHCBP1-204ENST00000565887 AIFM3Q96NN9 605 aa14.34□□□□□ -0.11
SHCBP1-204ENST00000565887 SENP6Q9GZR1 1112 aaPredicted RBP14.34□□□□□ -0.11
SHCBP1-204ENST00000565887 TMEM260Q9NX78 707 aa14.34□□□□□ -0.11
SHCBP1-204ENST00000565887 KCNJ14Q9UNX9 436 aa14.34□□□□□ -0.11
SHCBP1-204ENST00000565887 ADCY6O43306 1168 aa14.33□□□□□ -0.12
SHCBP1-204ENST00000565887 MMP1P03956 469 aa14.33□□□□□ -0.12
SHCBP1-204ENST00000565887 ASGR1P07306 291 aa14.33□□□□□ -0.12
SHCBP1-204ENST00000565887 ITGB5P18084 799 aa14.33□□□□□ -0.12
SHCBP1-204ENST00000565887 SETQ01105 290 aaPredicted RBP14.33□□□□□ -0.12
SHCBP1-204ENST00000565887 ST3GAL1Q11201 340 aa14.33□□□□□ -0.12
SHCBP1-204ENST00000565887 DGKDQ16760 1214 aa14.33□□□□□ -0.12
SHCBP1-204ENST00000565887 MYSM1Q5VVJ2 828 aa14.33□□□□□ -0.12
SHCBP1-204ENST00000565887 MOXD1Q6UVY6 613 aa14.33□□□□□ -0.12
SHCBP1-204ENST00000565887 METTL7BQ6UX53 244 aa14.33□□□□□ -0.12
SHCBP1-204ENST00000565887 FBXO18Q8NFZ0 1043 aa14.33□□□□□ -0.12
SHCBP1-204ENST00000565887 PPTC7Q8NI37 304 aa14.33□□□□□ -0.12
SHCBP1-204ENST00000565887 CRYGNQ8WXF5 182 aa14.33□□□□□ -0.12
SHCBP1-204ENST00000565887 VTI1AQ96AJ9 217 aa14.33□□□□□ -0.12
SHCBP1-204ENST00000565887 SMC3Q9UQE7 1217 aa14.33□□□□□ -0.12
SHCBP1-204ENST00000565887 CTAGE5O15320 804 aa14.32□□□□□ -0.12
SHCBP1-204ENST00000565887 ARIH2O95376 493 aa14.32□□□□□ -0.12
SHCBP1-204ENST00000565887 GGPS1O95749 300 aa14.32□□□□□ -0.12
SHCBP1-204ENST00000565887 ARHGAP1Q07960 439 aa14.32□□□□□ -0.12
SHCBP1-204ENST00000565887 CUL4AQ13619 759 aa14.32□□□□□ -0.12
SHCBP1-204ENST00000565887 NPY5RQ15761 445 aa14.32□□□□□ -0.12
SHCBP1-204ENST00000565887 KRT40Q6A162 431 aa14.32□□□□□ -0.12
SHCBP1-204ENST00000565887 SLC39A5Q6ZMH5 540 aa14.32□□□□□ -0.12
SHCBP1-204ENST00000565887 TBCKQ8TEA7 893 aa14.32□□□□□ -0.12
SHCBP1-204ENST00000565887 LENG1Q96BZ8 264 aaPredicted RBP14.32□□□□□ -0.12
SHCBP1-204ENST00000565887 INTS4Q96HW7 963 aaKnown RBP14.32□□□□□ -0.12
SHCBP1-204ENST00000565887 SDF4Q9BRK5 362 aa14.32□□□□□ -0.12
SHCBP1-204ENST00000565887 KCNH7Q9NS40 1196 aa14.32□□□□□ -0.12
SHCBP1-204ENST00000565887 NR2E3Q9Y5X4 410 aa14.32□□□□□ -0.12
SHCBP1-204ENST00000565887 CYP3A7-CYP3A51PA0A087WV96 503 aa14.31□□□□□ -0.12
SHCBP1-204ENST00000565887 A0A1W2PQ45 241 aaPredicted RBP14.31□□□□□ -0.12
SHCBP1-204ENST00000565887 A0A1W2PQY0 241 aa14.31□□□□□ -0.12
SHCBP1-204ENST00000565887 NOP56O00567 594 aaKnown RBP14.31□□□□□ -0.12
SHCBP1-204ENST00000565887 CD2BP2O95400 341 aaKnown RBP14.31□□□□□ -0.12
SHCBP1-204ENST00000565887 PDIA4P13667 645 aaKnown RBP14.31□□□□□ -0.12
SHCBP1-204ENST00000565887 GCFC2P16383 781 aaKnown RBP14.31□□□□□ -0.12
SHCBP1-204ENST00000565887 UBA1P22314 1058 aaKnown RBP14.31□□□□□ -0.12
SHCBP1-204ENST00000565887 CYP3A7P24462 503 aa14.31□□□□□ -0.12
SHCBP1-204ENST00000565887 PLA2G4DQ86XP0 818 aa14.31□□□□□ -0.12
SHCBP1-204ENST00000565887 DIS3LQ8TF46 1054 aaKnown RBP14.31□□□□□ -0.12
SHCBP1-204ENST00000565887 AFG1LQ8WV93 481 aa14.31□□□□□ -0.12
SHCBP1-204ENST00000565887 DPF3Q92784 378 aa14.31□□□□□ -0.12
SHCBP1-204ENST00000565887 PGBD1Q96JS3 809 aa14.31□□□□□ -0.12
SHCBP1-204ENST00000565887 SPATA33Q96N06 139 aa14.31□□□□□ -0.12
SHCBP1-204ENST00000565887 MTG1Q9BT17 334 aaPredicted RBP14.31□□□□□ -0.12
SHCBP1-204ENST00000565887 FOXP1Q9H334 677 aaPredicted RBP14.31□□□□□ -0.12
SHCBP1-204ENST00000565887 STARD7Q9NQZ5 370 aa14.31□□□□□ -0.12
SHCBP1-204ENST00000565887 TBC1D22BQ9NU19 505 aa14.31□□□□□ -0.12
SHCBP1-204ENST00000565887 LRRC37A2A6NM11 1700 aa14.31□□□□□ -0.12
SHCBP1-204ENST00000565887 NFASCO94856 1347 aa14.31□□□□□ -0.12
SHCBP1-204ENST00000565887 MROH7Q68CQ1 1323 aa14.31□□□□□ -0.12
SHCBP1-204ENST00000565887 FRMPD3Q5JV73 1810 aa14.3□□□□□ -0.12
SHCBP1-204ENST00000565887 K7ELQ4 463 aaPredicted RBP14.3□□□□□ -0.12
SHCBP1-204ENST00000565887 PDCP20941 246 aa14.3□□□□□ -0.12
SHCBP1-204ENST00000565887 BEX3Q00994 111 aa14.3□□□□□ -0.12
SHCBP1-204ENST00000565887 SP2Q02086 613 aa14.3□□□□□ -0.12
SHCBP1-204ENST00000565887 GNL2Q13823 731 aaKnown RBP14.3□□□□□ -0.12
SHCBP1-204ENST00000565887 TMEM63BQ5T3F8 832 aa14.3□□□□□ -0.12
SHCBP1-204ENST00000565887 PPP4R3AQ6IN85 833 aa14.3□□□□□ -0.12
SHCBP1-204ENST00000565887 CYFIP1Q7L576 1253 aa14.3□□□□□ -0.12
SHCBP1-204ENST00000565887 NEK8Q86SG6 692 aa14.3□□□□□ -0.12
SHCBP1-204ENST00000565887 HSCBQ8IWL3 235 aa14.3□□□□□ -0.12
SHCBP1-204ENST00000565887 DIS3L2Q8IYB7 885 aaKnown RBP14.3□□□□□ -0.12
SHCBP1-204ENST00000565887 RASGRP4Q8TDF6 673 aa14.3□□□□□ -0.12
SHCBP1-204ENST00000565887 COPS5Q92905 334 aa14.3□□□□□ -0.12
SHCBP1-204ENST00000565887 KATNAL1Q9BW62 490 aa14.3□□□□□ -0.12
SHCBP1-204ENST00000565887 TCEAL9Q9UHQ7 104 aa14.3□□□□□ -0.12
SHCBP1-204ENST00000565887 A0A0U1RQG5 324 aaPredicted RBP14.29□□□□□ -0.12
SHCBP1-204ENST00000565887 MYADML2A6NDP7 307 aa14.29□□□□□ -0.12
SHCBP1-204ENST00000565887 BTBD18B2RXH4 712 aa14.29□□□□□ -0.12
SHCBP1-204ENST00000565887 FAM86B1E9PN63 330 aa14.29□□□□□ -0.12
SHCBP1-204ENST00000565887 EVI5O60447 810 aa14.29□□□□□ -0.12
SHCBP1-204ENST00000565887 MMP3P08254 477 aa14.29□□□□□ -0.12
SHCBP1-204ENST00000565887 MYL3P08590 195 aa14.29□□□□□ -0.12
SHCBP1-204ENST00000565887 FAM86B2P0C5J1 330 aa14.29□□□□□ -0.12
SHCBP1-204ENST00000565887 HOXD8P13378 290 aaPredicted RBP14.29□□□□□ -0.12
SHCBP1-204ENST00000565887 KCNA2P16389 499 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms