RNA–Protein interactions for RNA: ENST00000565442.1

CHD9-215, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 703 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-215ENST00000565442 HSP90AA2PQ14568 343 aaPredicted RBP6.55□□□□□ -1.36
CHD9-215ENST00000565442 POMZP3Q6PJE2 187 aa6.55□□□□□ -1.36
CHD9-215ENST00000565442 JMYQ8N9B5 988 aa6.55□□□□□ -1.36
CHD9-215ENST00000565442 BTN2A2Q8WVV5 523 aa6.55□□□□□ -1.36
CHD9-215ENST00000565442 TSPAN17Q96FV3 270 aa6.55□□□□□ -1.36
CHD9-215ENST00000565442 MRGPRX3Q96LB0 322 aa6.55□□□□□ -1.36
CHD9-215ENST00000565442 AARSD1Q9BTE6 412 aaKnown RBP6.55□□□□□ -1.36
CHD9-215ENST00000565442 BCAS3Q9H6U6 928 aa6.55□□□□□ -1.36
CHD9-215ENST00000565442 SF3B6Q9Y3B4 125 aaKnown RBP6.55□□□□□ -1.36
CHD9-215ENST00000565442 SF1Q15637 639 aaKnown RBP6.54□□□□□ -1.36
CHD9-215ENST00000565442 DPY19L1Q2PZI1 675 aa6.54□□□□□ -1.36
CHD9-215ENST00000565442 FOXB2Q5VYV0 432 aa6.54□□□□□ -1.36
CHD9-215ENST00000565442 GTF2IRD2BQ6EKJ0 949 aa6.54□□□□□ -1.36
CHD9-215ENST00000565442 SPRED1Q7Z699 444 aa6.54□□□□□ -1.36
CHD9-215ENST00000565442 GTF2IRD2Q86UP8 949 aa6.54□□□□□ -1.36
CHD9-215ENST00000565442 TRIM59Q8IWR1 403 aa6.54□□□□□ -1.36
CHD9-215ENST00000565442 ZFPM1Q8IX07 1006 aa6.54□□□□□ -1.36
CHD9-215ENST00000565442 CRACR2BQ8N4Y2 399 aaPredicted RBP6.54□□□□□ -1.36
CHD9-215ENST00000565442 NLGN2Q8NFZ4 835 aa6.54□□□□□ -1.36
CHD9-215ENST00000565442 SH3RF3Q8TEJ3 882 aaPredicted RBP6.54□□□□□ -1.36
CHD9-215ENST00000565442 CPA5Q8WXQ8 436 aa6.54□□□□□ -1.36
CHD9-215ENST00000565442 ZBTB8AQ96BR9 441 aa6.54□□□□□ -1.36
CHD9-215ENST00000565442 SLITRK6Q9H5Y7 841 aa6.54□□□□□ -1.36
CHD9-215ENST00000565442 TMEM260Q9NX78 707 aa6.54□□□□□ -1.36
CHD9-215ENST00000565442 TRAV20A0A0B4J274 112 aa6.53□□□□□ -1.36
CHD9-215ENST00000565442 ENPP3O14638 875 aa6.53□□□□□ -1.36
CHD9-215ENST00000565442 PRODHO43272 600 aa6.53□□□□□ -1.36
CHD9-215ENST00000565442 CDC45O75419 566 aa6.53□□□□□ -1.36
CHD9-215ENST00000565442 L1CAMP32004 1257 aa6.53□□□□□ -1.36
CHD9-215ENST00000565442 ACVRL1P37023 503 aa6.53□□□□□ -1.36
CHD9-215ENST00000565442 AMPD2Q01433 879 aa6.53□□□□□ -1.36
CHD9-215ENST00000565442 CRIP3Q6Q6R5 217 aa6.53□□□□□ -1.36
CHD9-215ENST00000565442 HOMER1Q86YM7 354 aa6.53□□□□□ -1.36
CHD9-215ENST00000565442 APPBP2Q92624 585 aa6.53□□□□□ -1.36
CHD9-215ENST00000565442 PTCHD1Q96NR3 888 aa6.53□□□□□ -1.36
CHD9-215ENST00000565442 CDC6Q99741 560 aa6.53□□□□□ -1.36
CHD9-215ENST00000565442 SSBP3Q9BWW4 388 aaPredicted RBP6.53□□□□□ -1.36
CHD9-215ENST00000565442 RXFP1Q9HBX9 757 aa6.53□□□□□ -1.36
CHD9-215ENST00000565442 ST6GALNAC2Q9UJ37 374 aa6.53□□□□□ -1.36
CHD9-215ENST00000565442 TBC1D8O95759 1140 aa6.52□□□□□ -1.37
CHD9-215ENST00000565442 CD3EP07766 207 aa6.52□□□□□ -1.37
CHD9-215ENST00000565442 HSD3B2P26439 372 aa6.52□□□□□ -1.37
CHD9-215ENST00000565442 CACNB2Q08289 660 aaPredicted RBP6.52□□□□□ -1.37
CHD9-215ENST00000565442 LONRF2Q1L5Z9 754 aa6.52□□□□□ -1.37
CHD9-215ENST00000565442 RGL3Q3MIN7 710 aa6.52□□□□□ -1.37
CHD9-215ENST00000565442 FAM209AQ5JX71 171 aa6.52□□□□□ -1.37
CHD9-215ENST00000565442 EGFLAMQ63HQ2 1017 aa6.52□□□□□ -1.37
CHD9-215ENST00000565442 ZNF662Q6ZS27 426 aa6.52□□□□□ -1.37
CHD9-215ENST00000565442 CABP7Q86V35 215 aa6.52□□□□□ -1.37
CHD9-215ENST00000565442 ZSWIM2Q8NEG5 633 aa6.52□□□□□ -1.37
CHD9-215ENST00000565442 EXOC2Q96KP1 924 aa6.52□□□□□ -1.37
CHD9-215ENST00000565442 MCMBPQ9BTE3 642 aa6.52□□□□□ -1.37
CHD9-215ENST00000565442 IER2Q9BTL4 223 aa6.52□□□□□ -1.37
CHD9-215ENST00000565442 STXBP3O00186 592 aa6.51□□□□□ -1.37
CHD9-215ENST00000565442 ASMTLO95671 621 aa6.51□□□□□ -1.37
CHD9-215ENST00000565442 CAPNS1P04632 268 aa6.51□□□□□ -1.37
CHD9-215ENST00000565442 SNRPB2P08579 225 aaKnown RBP6.51□□□□□ -1.37
CHD9-215ENST00000565442 PABPC1P11940 636 aaKnown RBP6.51□□□□□ -1.37
CHD9-215ENST00000565442 NOP2P46087 812 aaKnown RBP6.51□□□□□ -1.37
CHD9-215ENST00000565442 KCNJ6P48051 423 aa6.51□□□□□ -1.37
CHD9-215ENST00000565442 POU4F1Q01851 419 aa6.51□□□□□ -1.37
CHD9-215ENST00000565442 GRB10Q13322 594 aa6.51□□□□□ -1.37
CHD9-215ENST00000565442 SMAD4Q13485 552 aaKnown RBP6.51□□□□□ -1.37
CHD9-215ENST00000565442 NSMFQ6X4W1 530 aa6.51□□□□□ -1.37
CHD9-215ENST00000565442 LGI4Q8N135 537 aa6.51□□□□□ -1.37
CHD9-215ENST00000565442 KISS1RQ969F8 398 aaPredicted RBP6.51□□□□□ -1.37
CHD9-215ENST00000565442 IPO9Q96P70 1041 aaKnown RBP6.51□□□□□ -1.37
CHD9-215ENST00000565442 NKX2-4Q9H2Z4 354 aa6.51□□□□□ -1.37
CHD9-215ENST00000565442 INVSQ9Y283 1065 aa6.51□□□□□ -1.37
CHD9-215ENST00000565442 TSC22D4Q9Y3Q8 395 aa6.51□□□□□ -1.37
CHD9-215ENST00000565442 TRBV23-1A0A0A0MS06 115 aa6.5□□□□□ -1.37
CHD9-215ENST00000565442 PPP1R12AO14974 1030 aaPredicted RBP6.5□□□□□ -1.37
CHD9-215ENST00000565442 FGFR1P11362 822 aa6.5□□□□□ -1.37
CHD9-215ENST00000565442 IFNGR1P15260 489 aa6.5□□□□□ -1.37
CHD9-215ENST00000565442 ECI1P42126 302 aa6.5□□□□□ -1.37
CHD9-215ENST00000565442 KIAA2012Q0VF49 1180 aa6.5□□□□□ -1.37
CHD9-215ENST00000565442 SLC9A5Q14940 896 aa6.5□□□□□ -1.37
CHD9-215ENST00000565442 TKFCQ3LXA3 575 aa6.5□□□□□ -1.37
CHD9-215ENST00000565442 CRB2Q5IJ48 1285 aa6.5□□□□□ -1.37
CHD9-215ENST00000565442 GLB1LQ6UWU2 654 aa6.5□□□□□ -1.37
CHD9-215ENST00000565442 C16orf86Q6ZW13 317 aa6.5□□□□□ -1.37
CHD9-215ENST00000565442 SCUBE1Q8IWY4 988 aa6.5□□□□□ -1.37
CHD9-215ENST00000565442 LINC00482Q8N8I6 264 aa6.5□□□□□ -1.37
CHD9-215ENST00000565442 OSBP2Q969R2 916 aa6.5□□□□□ -1.37
CHD9-215ENST00000565442 FCRL3Q96P31 734 aaPredicted RBP6.5□□□□□ -1.37
CHD9-215ENST00000565442 DHRS4Q9BTZ2 278 aa6.5□□□□□ -1.37
CHD9-215ENST00000565442 NUDT5Q9UKK9 219 aa6.5□□□□□ -1.37
CHD9-215ENST00000565442 ZNF536O15090 1300 aa6.5□□□□□ -1.37
CHD9-215ENST00000565442 SBNO2Q9Y2G9 1366 aa6.49□□□□□ -1.37
CHD9-215ENST00000565442 AURKAO14965 403 aa6.49□□□□□ -1.37
CHD9-215ENST00000565442 DLX3O60479 287 aa6.49□□□□□ -1.37
CHD9-215ENST00000565442 FZD7O75084 574 aa6.49□□□□□ -1.37
CHD9-215ENST00000565442 CLSTN1O94985 981 aa6.49□□□□□ -1.37
CHD9-215ENST00000565442 HOXC12P31275 282 aa6.49□□□□□ -1.37
CHD9-215ENST00000565442 GFRA1P56159 465 aa6.49□□□□□ -1.37
CHD9-215ENST00000565442 SCRN1Q12765 414 aa6.49□□□□□ -1.37
CHD9-215ENST00000565442 CDSNQ15517 529 aa6.49□□□□□ -1.37
CHD9-215ENST00000565442 PRSS53Q2L4Q9 553 aa6.49□□□□□ -1.37
CHD9-215ENST00000565442 ZC3H12BQ5HYM0 836 aaKnown RBP6.49□□□□□ -1.37
CHD9-215ENST00000565442 BORAQ6PGQ7 559 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms