RNA–Protein interactions for RNA: ENST00000564172.1

GDE1-203, Transcript of glycerophosphodiester phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene GDE1, Length 2,238 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDE1-203ENST00000564172 COL20A1Q9P218 1284 aa19.84■□□□□ 0.77
GDE1-203ENST00000564172 SMTNL1A8MU46 457 aa19.83■□□□□ 0.77
GDE1-203ENST00000564172 STX1AQ16623 288 aa19.83■□□□□ 0.77
GDE1-203ENST00000564172 SH3RF1Q7Z6J0 888 aa19.83■□□□□ 0.77
GDE1-203ENST00000564172 MNS1Q8NEH6 495 aa19.83■□□□□ 0.77
GDE1-203ENST00000564172 ZNF397Q8NF99 534 aaPredicted RBP19.83■□□□□ 0.77
GDE1-203ENST00000564172 GJA10Q969M2 543 aa19.83■□□□□ 0.77
GDE1-203ENST00000564172 CCDC34Q96HJ3 373 aa19.83■□□□□ 0.77
GDE1-203ENST00000564172 DISC1Q9NRI5 854 aa19.83■□□□□ 0.77
GDE1-203ENST00000564172 RNF146Q9NTX7 359 aa19.83■□□□□ 0.77
GDE1-203ENST00000564172 PCDHA12Q9UN75 941 aa19.83■□□□□ 0.77
GDE1-203ENST00000564172 PCDHA5Q9Y5H7 936 aa19.83■□□□□ 0.77
GDE1-203ENST00000564172 ZNF76P36508 570 aa19.83■□□□□ 0.76
GDE1-203ENST00000564172 RPS6P62753 249 aaKnown RBP19.83■□□□□ 0.76
GDE1-203ENST00000564172 CABP7Q86V35 215 aa19.83■□□□□ 0.76
GDE1-203ENST00000564172 GRAMD1CQ8IYS0 662 aa19.83■□□□□ 0.76
GDE1-203ENST00000564172 CYP2W1Q8TAV3 490 aa19.83■□□□□ 0.76
GDE1-203ENST00000564172 TEX13BQ9BXU2 312 aa19.83■□□□□ 0.76
GDE1-203ENST00000564172 RAB34Q9BZG1 259 aa19.83■□□□□ 0.76
GDE1-203ENST00000564172 DNAJC25Q9H1X3 360 aa19.83■□□□□ 0.76
GDE1-203ENST00000564172 ANO10Q9NW15 660 aa19.83■□□□□ 0.76
GDE1-203ENST00000564172 LRWD1Q9UFC0 647 aa19.83■□□□□ 0.76
GDE1-203ENST00000564172 GJA5P36382 358 aa19.82■□□□□ 0.76
GDE1-203ENST00000564172 UBXN2AP68543 259 aa19.82■□□□□ 0.76
GDE1-203ENST00000564172 ETNPPLQ8TBG4 499 aa19.82■□□□□ 0.76
GDE1-203ENST00000564172 FAM200AQ8TCP9 573 aa19.82■□□□□ 0.76
GDE1-203ENST00000564172 SYTL5Q8TDW5 730 aaPredicted RBP19.82■□□□□ 0.76
GDE1-203ENST00000564172 PAGE5Q96GU1 130 aa19.82■□□□□ 0.76
GDE1-203ENST00000564172 ZKSCAN7Q9P0L1 754 aaPredicted RBP19.82■□□□□ 0.76
GDE1-203ENST00000564172 TBX3O15119 743 aa19.82■□□□□ 0.76
GDE1-203ENST00000564172 STAT3P40763 770 aa19.82■□□□□ 0.76
GDE1-203ENST00000564172 FKBP1BP68106 108 aa19.82■□□□□ 0.76
GDE1-203ENST00000564172 MOGSQ13724 837 aa19.82■□□□□ 0.76
GDE1-203ENST00000564172 PDXDC2PQ6P474 469 aa19.82■□□□□ 0.76
GDE1-203ENST00000564172 POTEEQ6S8J3 1075 aa19.82■□□□□ 0.76
GDE1-203ENST00000564172 LBX2Q6XYB7 198 aa19.82■□□□□ 0.76
GDE1-203ENST00000564172 ZNF526Q8TF50 670 aaPredicted RBP19.82■□□□□ 0.76
GDE1-203ENST00000564172 MMTAG2Q9BU76 263 aaKnown RBP19.82■□□□□ 0.76
GDE1-203ENST00000564172 GBA2Q9HCG7 927 aaPredicted RBP19.82■□□□□ 0.76
GDE1-203ENST00000564172 AGTPBP1Q9UPW5 1226 aa19.82■□□□□ 0.76
GDE1-203ENST00000564172 IGLV3-22A0A075B6J6 115 aa19.81■□□□□ 0.76
GDE1-203ENST00000564172 POTEMA6NI47 508 aa19.81■□□□□ 0.76
GDE1-203ENST00000564172 BIN1O00499 593 aa19.81■□□□□ 0.76
GDE1-203ENST00000564172 AFMP43652 599 aa19.81■□□□□ 0.76
GDE1-203ENST00000564172 ZRSR1Q15695 479 aaKnown RBP19.81■□□□□ 0.76
GDE1-203ENST00000564172 NAALADL2Q58DX5 795 aa19.81■□□□□ 0.76
GDE1-203ENST00000564172 RRAGBQ5VZM2 374 aa19.81■□□□□ 0.76
GDE1-203ENST00000564172 RNF207Q6ZRF8 634 aa19.81■□□□□ 0.76
GDE1-203ENST00000564172 SLFN12Q8IYM2 578 aa19.81■□□□□ 0.76
GDE1-203ENST00000564172 RASSF8Q8NHQ8 419 aa19.81■□□□□ 0.76
GDE1-203ENST00000564172 UIMC1Q96RL1 719 aa19.81■□□□□ 0.76
GDE1-203ENST00000564172 CAVIN2O95810 425 aa19.8■□□□□ 0.76
GDE1-203ENST00000564172 STAT6P42226 847 aa19.8■□□□□ 0.76
GDE1-203ENST00000564172 ZNF165P49910 485 aa19.8■□□□□ 0.76
GDE1-203ENST00000564172 PLS1Q14651 629 aa19.8■□□□□ 0.76
GDE1-203ENST00000564172 NSMFQ6X4W1 530 aa19.8■□□□□ 0.76
GDE1-203ENST00000564172 FASTKD5Q7L8L6 764 aaKnown RBP19.8■□□□□ 0.76
GDE1-203ENST00000564172 TXLNBQ8N3L3 684 aa19.8■□□□□ 0.76
GDE1-203ENST00000564172 RPTORQ8N122 1335 aa19.8■□□□□ 0.76
GDE1-203ENST00000564172 SARSP49591 514 aaKnown RBP19.8■□□□□ 0.76
GDE1-203ENST00000564172 NT5DC1Q5TFE4 455 aa19.8■□□□□ 0.76
GDE1-203ENST00000564172 SLC30A10Q6XR72 485 aa19.8■□□□□ 0.76
GDE1-203ENST00000564172 C11orf57Q6ZUT1 292 aaPredicted RBP19.8■□□□□ 0.76
GDE1-203ENST00000564172 GOLGA6L1Q8N7Z2 621 aa19.8■□□□□ 0.76
GDE1-203ENST00000564172 FAM20AQ96MK3 541 aa19.8■□□□□ 0.76
GDE1-203ENST00000564172 PLIN2Q99541 437 aa19.8■□□□□ 0.76
GDE1-203ENST00000564172 ASCC2Q9H1I8 757 aaPredicted RBP19.8■□□□□ 0.76
GDE1-203ENST00000564172 RABGAP1Q9Y3P9 1069 aa19.8■□□□□ 0.76
GDE1-203ENST00000564172 COL11A1P12107 1806 aaPredicted RBP19.8■□□□□ 0.76
GDE1-203ENST00000564172 MSH4O15457 936 aa19.79■□□□□ 0.76
GDE1-203ENST00000564172 CELF2O95319 508 aaKnown RBP19.79■□□□□ 0.76
GDE1-203ENST00000564172 NLRP12P59046 1061 aa19.79■□□□□ 0.76
GDE1-203ENST00000564172 SNAPC2Q13487 334 aa19.79■□□□□ 0.76
GDE1-203ENST00000564172 TKFCQ3LXA3 575 aa19.79■□□□□ 0.76
GDE1-203ENST00000564172 CEP55Q53EZ4 464 aa19.79■□□□□ 0.76
GDE1-203ENST00000564172 MB21D1Q8N884 522 aa19.79■□□□□ 0.76
GDE1-203ENST00000564172 SPATA20Q8TB22 786 aa19.79■□□□□ 0.76
GDE1-203ENST00000564172 TAAR1Q96RJ0 339 aa19.79■□□□□ 0.76
GDE1-203ENST00000564172 MTRQ99707 1265 aa19.79■□□□□ 0.76
GDE1-203ENST00000564172 CBX8Q9HC52 389 aa19.79■□□□□ 0.76
GDE1-203ENST00000564172 LOC285556D6RIA3 1793 aa19.79■□□□□ 0.76
GDE1-203ENST00000564172 BAATQ14032 418 aaPredicted RBP19.79■□□□□ 0.76
GDE1-203ENST00000564172 DPCR1Q3MIW9 517 aa19.79■□□□□ 0.76
GDE1-203ENST00000564172 ISM2Q6H9L7 571 aa19.79■□□□□ 0.76
GDE1-203ENST00000564172 C2orf69Q8N8R5 385 aa19.79■□□□□ 0.76
GDE1-203ENST00000564172 STAMQ92783 540 aa19.79■□□□□ 0.76
GDE1-203ENST00000564172 MED4Q9NPJ6 270 aa19.79■□□□□ 0.76
GDE1-203ENST00000564172 PAXBP1Q9Y5B6 917 aa19.79■□□□□ 0.76
GDE1-203ENST00000564172 PLCG1P19174 1290 aa19.78■□□□□ 0.76
GDE1-203ENST00000564172 GPAT2Q6NUI2 795 aa19.78■□□□□ 0.76
GDE1-203ENST00000564172 LRRC15Q8TF66 581 aa19.78■□□□□ 0.76
GDE1-203ENST00000564172 SMARCE1Q969G3 411 aa19.78■□□□□ 0.76
GDE1-203ENST00000564172 CALML4Q96GE6 196 aa19.78■□□□□ 0.76
GDE1-203ENST00000564172 BTBD7Q9P203 1132 aa19.78■□□□□ 0.76
GDE1-203ENST00000564172 KRT79Q5XKE5 535 aa19.78■□□□□ 0.76
GDE1-203ENST00000564172 PLA2G4DQ86XP0 818 aa19.78■□□□□ 0.76
GDE1-203ENST00000564172 NUDT12Q9BQG2 462 aa19.78■□□□□ 0.76
GDE1-203ENST00000564172 ACAD9Q9H845 621 aa19.78■□□□□ 0.76
GDE1-203ENST00000564172 MEIS1O00470 390 aa19.77■□□□□ 0.76
GDE1-203ENST00000564172 PEX10O60683 326 aa19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms