RNA–Protein interactions for RNA: ENST00000563367.1

NME3-203, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 3

Gene NME3, Length 891 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-203ENST00000563367 XRRA1Q6P2D8 792 aa32.47■■■□□ 2.79
NME3-203ENST00000563367 PPP1R13LQ8WUF5 828 aa32.47■■■□□ 2.79
NME3-203ENST00000563367 SPDYE3A6NKU9 549 aa32.46■■■□□ 2.79
NME3-203ENST00000563367 GGPS1O95749 300 aa32.46■■■□□ 2.79
NME3-203ENST00000563367 IFNAR1P17181 557 aa32.46■■■□□ 2.79
NME3-203ENST00000563367 ICAM3P32942 547 aa32.46■■■□□ 2.79
NME3-203ENST00000563367 SPATA31C2B4DYI2 1134 aa32.45■■■□□ 2.79
NME3-203ENST00000563367 EIF5BO60841 1220 aaKnown RBP32.45■■■□□ 2.79
NME3-203ENST00000563367 FXR1P51114 621 aaKnown RBP eCLIP32.45■■■□□ 2.79
NME3-203ENST00000563367 GNPTABQ3T906 1256 aa32.45■■■□□ 2.79
NME3-203ENST00000563367 PPTC7Q8NI37 304 aa32.45■■■□□ 2.79
NME3-203ENST00000563367 SLC26A6Q9BXS9 759 aa32.45■■■□□ 2.79
NME3-203ENST00000563367 SEZ6LQ9BYH1 1024 aa32.45■■■□□ 2.79
NME3-203ENST00000563367 TRPV6Q9H1D0 765 aa32.45■■■□□ 2.79
NME3-203ENST00000563367 TLR3O15455 904 aaKnown RBP32.44■■■□□ 2.78
NME3-203ENST00000563367 B4GALT4O60513 344 aa32.44■■■□□ 2.78
NME3-203ENST00000563367 RAG1P15918 1043 aa32.44■■■□□ 2.78
NME3-203ENST00000563367 STK3Q13188 491 aa32.44■■■□□ 2.78
NME3-203ENST00000563367 NBPF20Q3BBV1 942 aa32.44■■■□□ 2.78
NME3-203ENST00000563367 C8orf34Q49A92 452 aa32.44■■■□□ 2.78
NME3-203ENST00000563367 PGBD1Q96JS3 809 aa32.44■■■□□ 2.78
NME3-203ENST00000563367 RNF26Q9BY78 433 aaPredicted RBP32.44■■■□□ 2.78
NME3-203ENST00000563367 ALDH8A1Q9H2A2 487 aaPredicted RBP32.44■■■□□ 2.78
NME3-203ENST00000563367 TMEM260Q9NX78 707 aa32.44■■■□□ 2.78
NME3-203ENST00000563367 ADAMTS3O15072 1205 aa32.43■■■□□ 2.78
NME3-203ENST00000563367 FIBPO43427 364 aa32.43■■■□□ 2.78
NME3-203ENST00000563367 HSDL1Q3SXM5 330 aa32.43■■■□□ 2.78
NME3-203ENST00000563367 KAT2BQ92831 832 aa32.43■■■□□ 2.78
NME3-203ENST00000563367 CLK2P49760 499 aaKnown RBP32.42■■■□□ 2.78
NME3-203ENST00000563367 AKAP17AQ02040 695 aaKnown RBP32.42■■■□□ 2.78
NME3-203ENST00000563367 DGKDQ16760 1214 aa32.42■■■□□ 2.78
NME3-203ENST00000563367 TEX2Q8IWB9 1127 aa32.42■■■□□ 2.78
NME3-203ENST00000563367 TDHQ8IZJ6 230 aa32.42■■■□□ 2.78
NME3-203ENST00000563367 SPATA33Q96N06 139 aa32.42■■■□□ 2.78
NME3-203ENST00000563367 TIMP1P01033 207 aa32.41■■■□□ 2.78
NME3-203ENST00000563367 ITGB5P18084 799 aa32.41■■■□□ 2.78
NME3-203ENST00000563367 MLXIPQ9HAP2 919 aa32.41■■■□□ 2.78
NME3-203ENST00000563367 TPCN1Q9ULQ1 816 aa32.41■■■□□ 2.78
NME3-203ENST00000563367 UBIAD1Q9Y5Z9 338 aa32.41■■■□□ 2.78
NME3-203ENST00000563367 HOXD8P13378 290 aaPredicted RBP32.4■■■□□ 2.78
NME3-203ENST00000563367 CHMP4BP1P59074 171 aa32.4■■■□□ 2.78
NME3-203ENST00000563367 NLRX1Q86UT6 975 aa32.4■■■□□ 2.78
NME3-203ENST00000563367 ZMYND12Q9H0C1 365 aa32.4■■■□□ 2.78
NME3-203ENST00000563367 GLT8D2Q9H1C3 349 aa32.4■■■□□ 2.78
NME3-203ENST00000563367 TRMT13Q9NUP7 481 aaKnown RBP32.4■■■□□ 2.78
NME3-203ENST00000563367 LAMA3Q16787 3333 aa32.39■■■□□ 2.78
NME3-203ENST00000563367 ESYT2A0FGR8 921 aa32.39■■■□□ 2.78
NME3-203ENST00000563367 FOSP01100 380 aaPredicted RBP32.39■■■□□ 2.78
NME3-203ENST00000563367 ZNF286BP0CG31 522 aa32.39■■■□□ 2.78
NME3-203ENST00000563367 AK2P54819 239 aa32.39■■■□□ 2.78
NME3-203ENST00000563367 FAM47CQ5HY64 1035 aa32.39■■■□□ 2.78
NME3-203ENST00000563367 NFRKBQ6P4R8 1299 aa32.39■■■□□ 2.78
NME3-203ENST00000563367 ANO3Q9BYT9 981 aa32.39■■■□□ 2.78
NME3-203ENST00000563367 EHMT1Q9H9B1 1298 aa32.39■■■□□ 2.78
NME3-203ENST00000563367 EPHB4P54760 987 aa32.38■■■□□ 2.77
NME3-203ENST00000563367 SSRP1Q08945 709 aaKnown RBP32.38■■■□□ 2.77
NME3-203ENST00000563367 SCRN1Q12765 414 aa32.38■■■□□ 2.77
NME3-203ENST00000563367 NEDD9Q14511 834 aa32.38■■■□□ 2.77
NME3-203ENST00000563367 JAKMIP3Q5VZ66 844 aa32.38■■■□□ 2.77
NME3-203ENST00000563367 CYFIP1Q7L576 1253 aa32.38■■■□□ 2.77
NME3-203ENST00000563367 GPRASP2Q96D09 838 aa32.38■■■□□ 2.77
NME3-203ENST00000563367 PPP1R12CQ9BZL4 782 aa32.38■■■□□ 2.77
NME3-203ENST00000563367 TELO2Q9Y4R8 837 aa32.38■■■□□ 2.77
NME3-203ENST00000563367 TRIP12Q14669 1992 aaPredicted RBP32.38■■■□□ 2.77
NME3-203ENST00000563367 CPLX1O14810 134 aa32.37■■■□□ 2.77
NME3-203ENST00000563367 ATP9AO75110 1047 aa32.37■■■□□ 2.77
NME3-203ENST00000563367 PPFIA4O75335 1185 aa32.37■■■□□ 2.77
NME3-203ENST00000563367 AP3B2Q13367 1082 aa32.37■■■□□ 2.77
NME3-203ENST00000563367 METTL7BQ6UX53 244 aa32.37■■■□□ 2.77
NME3-203ENST00000563367 CCDC12Q8WUD4 166 aaPredicted RBP32.37■■■□□ 2.77
NME3-203ENST00000563367 VPS54Q9P1Q0 977 aa32.37■■■□□ 2.77
NME3-203ENST00000563367 SOX1O00570 391 aaPredicted RBP32.36■■■□□ 2.77
NME3-203ENST00000563367 CYP2C18P33260 490 aa32.36■■■□□ 2.77
NME3-203ENST00000563367 MFSD5Q6N075 450 aa32.36■■■□□ 2.77
NME3-203ENST00000563367 TRIM22Q8IYM9 498 aa32.36■■■□□ 2.77
NME3-203ENST00000563367 SENP7Q9BQF6 1050 aa32.36■■■□□ 2.77
NME3-203ENST00000563367 C6orf50Q9HD87 102 aa32.36■■■□□ 2.77
NME3-203ENST00000563367 JADE2Q9NQC1 790 aa32.36■■■□□ 2.77
NME3-203ENST00000563367 UMODL1Q5DID0 1318 aa32.35■■■□□ 2.77
NME3-203ENST00000563367 PFKFB2O60825 505 aa32.35■■■□□ 2.77
NME3-203ENST00000563367 F2P00734 622 aa32.35■■■□□ 2.77
NME3-203ENST00000563367 PSEN2P49810 448 aa32.35■■■□□ 2.77
NME3-203ENST00000563367 FPGSQ05932 587 aa32.35■■■□□ 2.77
NME3-203ENST00000563367 PTPN11Q06124 597 aaPredicted RBP32.35■■■□□ 2.77
NME3-203ENST00000563367 C9orf50Q5SZB4 431 aa32.35■■■□□ 2.77
NME3-203ENST00000563367 CYP2W1Q8TAV3 490 aa32.35■■■□□ 2.77
NME3-203ENST00000563367 NOC4LQ9BVI4 516 aaKnown RBP32.35■■■□□ 2.77
NME3-203ENST00000563367 SLKQ9H2G2 1235 aaPredicted RBP32.35■■■□□ 2.77
NME3-203ENST00000563367 HAS3O00219 553 aa32.34■■■□□ 2.77
NME3-203ENST00000563367 CYP2C9P11712 490 aa32.34■■■□□ 2.77
NME3-203ENST00000563367 KCNA2P16389 499 aa32.34■■■□□ 2.77
NME3-203ENST00000563367 SREBF1P36956 1147 aa32.34■■■□□ 2.77
NME3-203ENST00000563367 NEK4P51957 841 aa32.34■■■□□ 2.77
NME3-203ENST00000563367 MTMR1Q13613 665 aa32.34■■■□□ 2.77
NME3-203ENST00000563367 ANKRD1Q15327 319 aa32.34■■■□□ 2.77
NME3-203ENST00000563367 SHHQ15465 462 aa32.34■■■□□ 2.77
NME3-203ENST00000563367 MXRA8Q9BRK3 442 aa32.34■■■□□ 2.77
NME3-203ENST00000563367 C16orf70Q9BSU1 422 aa32.34■■■□□ 2.77
NME3-203ENST00000563367 HIPK3Q9H422 1215 aa32.34■■■□□ 2.77
NME3-203ENST00000563367 MFSD10Q14728 455 aa32.33■■■□□ 2.77
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms