RNA–Protein interactions for RNA: ENST00000563343.5

HERPUD1-206, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-206ENST00000563343 RGS20O76081 388 aa9.17□□□□□ -0.94
HERPUD1-206ENST00000563343 TXNP10599 105 aaKnown RBP9.17□□□□□ -0.94
HERPUD1-206ENST00000563343 SLC1A4P43007 532 aa9.17□□□□□ -0.94
HERPUD1-206ENST00000563343 CHMP4BP1P59074 171 aa9.17□□□□□ -0.94
HERPUD1-206ENST00000563343 SIGLEC14Q08ET2 396 aa9.17□□□□□ -0.94
HERPUD1-206ENST00000563343 CAMK1Q14012 370 aa9.17□□□□□ -0.94
HERPUD1-206ENST00000563343 ZKSCAN2Q63HK3 967 aa9.17□□□□□ -0.94
HERPUD1-206ENST00000563343 ZNF444Q8N0Y2 327 aaPredicted RBP9.17□□□□□ -0.94
HERPUD1-206ENST00000563343 CLASRPQ8N2M8 674 aaKnown RBP9.17□□□□□ -0.94
HERPUD1-206ENST00000563343 AFG1LQ8WV93 481 aa9.17□□□□□ -0.94
HERPUD1-206ENST00000563343 ATOH1Q92858 354 aaPredicted RBP9.17□□□□□ -0.94
HERPUD1-206ENST00000563343 FSD1Q9BTV5 496 aa9.17□□□□□ -0.94
HERPUD1-206ENST00000563343 LMAN2LQ9H0V9 348 aa9.17□□□□□ -0.94
HERPUD1-206ENST00000563343 IRF2BPLQ9H1B7 796 aa9.17□□□□□ -0.94
HERPUD1-206ENST00000563343 CD207Q9UJ71 328 aa9.17□□□□□ -0.94
HERPUD1-206ENST00000563343 KAT6AQ92794 2004 aa9.16□□□□□ -0.94
HERPUD1-206ENST00000563343 H0Y858 1186 aa9.16□□□□□ -0.94
HERPUD1-206ENST00000563343 F2P00734 622 aa9.16□□□□□ -0.94
HERPUD1-206ENST00000563343 NBL1P41271 181 aa9.16□□□□□ -0.94
HERPUD1-206ENST00000563343 NOVP48745 357 aa9.16□□□□□ -0.94
HERPUD1-206ENST00000563343 PSEN2P49810 448 aa9.16□□□□□ -0.94
HERPUD1-206ENST00000563343 RPS6P62753 249 aaKnown RBP9.16□□□□□ -0.94
HERPUD1-206ENST00000563343 ZNF200P98182 395 aaPredicted RBP9.16□□□□□ -0.94
HERPUD1-206ENST00000563343 PDE4DQ08499 809 aa9.16□□□□□ -0.94
HERPUD1-206ENST00000563343 IKQ13123 557 aaPredicted RBP9.16□□□□□ -0.94
HERPUD1-206ENST00000563343 ADAM15Q13444 863 aa9.16□□□□□ -0.94
HERPUD1-206ENST00000563343 TTBK2Q6IQ55 1244 aa9.16□□□□□ -0.94
HERPUD1-206ENST00000563343 BTNL9Q6UXG8 535 aa9.16□□□□□ -0.94
HERPUD1-206ENST00000563343 OSBP2Q969R2 916 aa9.16□□□□□ -0.94
HERPUD1-206ENST00000563343 KIF1BPQ96EK5 621 aa9.16□□□□□ -0.94
HERPUD1-206ENST00000563343 RC3H2Q9HBD1 1191 aaKnown RBP9.16□□□□□ -0.94
HERPUD1-206ENST00000563343 TLR9Q9NR96 1032 aa9.16□□□□□ -0.94
HERPUD1-206ENST00000563343 IL17RBQ9NRM6 502 aa9.16□□□□□ -0.94
HERPUD1-206ENST00000563343 CLEC1BQ9P126 229 aa9.16□□□□□ -0.94
HERPUD1-206ENST00000563343 EMSYQ7Z589 1322 aa9.15□□□□□ -0.94
HERPUD1-206ENST00000563343 PTPDC1A2A3K4 754 aa9.15□□□□□ -0.94
HERPUD1-206ENST00000563343 RB1P06400 928 aa9.15□□□□□ -0.94
HERPUD1-206ENST00000563343 IFIT2P09913 472 aaKnown RBP9.15□□□□□ -0.94
HERPUD1-206ENST00000563343 TSPY3P0CV98 308 aa9.15□□□□□ -0.94
HERPUD1-206ENST00000563343 TSPY8P0CW00 308 aa9.15□□□□□ -0.94
HERPUD1-206ENST00000563343 CALML3P27482 149 aa9.15□□□□□ -0.94
HERPUD1-206ENST00000563343 RRP1P56182 461 aaKnown RBP9.15□□□□□ -0.94
HERPUD1-206ENST00000563343 TFAP4Q01664 338 aa9.15□□□□□ -0.94
HERPUD1-206ENST00000563343 PDE4BQ07343 736 aa9.15□□□□□ -0.94
HERPUD1-206ENST00000563343 GSE1Q14687 1217 aa9.15□□□□□ -0.94
HERPUD1-206ENST00000563343 LY6KQ17RY6 165 aa9.15□□□□□ -0.94
HERPUD1-206ENST00000563343 HSP90AB4PQ58FF6 505 aa9.15□□□□□ -0.94
HERPUD1-206ENST00000563343 RNF207Q6ZRF8 634 aa9.15□□□□□ -0.94
HERPUD1-206ENST00000563343 SMRP1Q8NCR6 262 aa9.15□□□□□ -0.94
HERPUD1-206ENST00000563343 DNERQ8NFT8 737 aa9.15□□□□□ -0.94
HERPUD1-206ENST00000563343 YME1L1Q96TA2 773 aa9.15□□□□□ -0.94
HERPUD1-206ENST00000563343 ALG1Q9BT22 464 aa9.15□□□□□ -0.94
HERPUD1-206ENST00000563343 ISY1Q9ULR0 285 aaKnown RBP9.15□□□□□ -0.94
HERPUD1-206ENST00000563343 TRPC6Q9Y210 931 aa9.15□□□□□ -0.94
HERPUD1-206ENST00000563343 EPG5Q9HCE0 2579 aa9.15□□□□□ -0.95
HERPUD1-206ENST00000563343 FRYLO94915 3013 aa9.14□□□□□ -0.95
HERPUD1-206ENST00000563343 GALR2O43603 387 aaPredicted RBP9.14□□□□□ -0.95
HERPUD1-206ENST00000563343 UPP2O95045 317 aa9.14□□□□□ -0.95
HERPUD1-206ENST00000563343 GLP2RO95838 553 aa9.14□□□□□ -0.95
HERPUD1-206ENST00000563343 PDGFBP01127 241 aaPredicted RBP9.14□□□□□ -0.95
HERPUD1-206ENST00000563343 GH1P01241 217 aa9.14□□□□□ -0.95
HERPUD1-206ENST00000563343 MMP1P03956 469 aa9.14□□□□□ -0.95
HERPUD1-206ENST00000563343 HOXD8P13378 290 aaPredicted RBP9.14□□□□□ -0.95
HERPUD1-206ENST00000563343 CASTP20810 708 aaKnown RBP9.14□□□□□ -0.95
HERPUD1-206ENST00000563343 HOXC8P31273 242 aa9.14□□□□□ -0.95
HERPUD1-206ENST00000563343 CTNNB1P35222 781 aa9.14□□□□□ -0.95
HERPUD1-206ENST00000563343 SLC16A2P36021 539 aa9.14□□□□□ -0.95
HERPUD1-206ENST00000563343 BMPR1AP36894 532 aa9.14□□□□□ -0.95
HERPUD1-206ENST00000563343 ID4P47928 161 aa9.14□□□□□ -0.95
HERPUD1-206ENST00000563343 CLCN6P51797 869 aa9.14□□□□□ -0.95
HERPUD1-206ENST00000563343 COASYQ13057 564 aa9.14□□□□□ -0.95
HERPUD1-206ENST00000563343 MFSD10Q14728 455 aa9.14□□□□□ -0.95
HERPUD1-206ENST00000563343 KIAA0753Q2KHM9 967 aa9.14□□□□□ -0.95
HERPUD1-206ENST00000563343 ZSCAN25Q6NSZ9 544 aa9.14□□□□□ -0.95
HERPUD1-206ENST00000563343 SERINC5Q86VE9 423 aa9.14□□□□□ -0.95
HERPUD1-206ENST00000563343 SIRT2Q8IXJ6 389 aa9.14□□□□□ -0.95
HERPUD1-206ENST00000563343 C7orf31Q8N865 590 aa9.14□□□□□ -0.95
HERPUD1-206ENST00000563343 CLP1Q92989 425 aaKnown RBP9.14□□□□□ -0.95
HERPUD1-206ENST00000563343 EMID1Q96A84 441 aaPredicted RBP9.14□□□□□ -0.95
HERPUD1-206ENST00000563343 ZNF287Q9HBT7 754 aa9.14□□□□□ -0.95
HERPUD1-206ENST00000563343 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.14□□□□□ -0.95
HERPUD1-206ENST00000563343 FNDC1Q4ZHG4 1894 aaPredicted RBP9.14□□□□□ -0.95
HERPUD1-206ENST00000563343 FANCMQ8IYD8 2048 aa9.14□□□□□ -0.95
HERPUD1-206ENST00000563343 MED19A0JLT2 244 aaPredicted RBP9.13□□□□□ -0.95
HERPUD1-206ENST00000563343 RSPH10B2B2RC85 870 aa9.13□□□□□ -0.95
HERPUD1-206ENST00000563343 M0R2C6 588 aa9.13□□□□□ -0.95
HERPUD1-206ENST00000563343 GPAA1O43292 621 aa9.13□□□□□ -0.95
HERPUD1-206ENST00000563343 NMT2O60551 498 aa9.13□□□□□ -0.95
HERPUD1-206ENST00000563343 RSPH10BP0C881 870 aa9.13□□□□□ -0.95
HERPUD1-206ENST00000563343 ZNF286BP0CG31 522 aa9.13□□□□□ -0.95
HERPUD1-206ENST00000563343 DNAJB1P25685 340 aa9.13□□□□□ -0.95
HERPUD1-206ENST00000563343 ICAM3P32942 547 aa9.13□□□□□ -0.95
HERPUD1-206ENST00000563343 DGKDQ16760 1214 aa9.13□□□□□ -0.95
HERPUD1-206ENST00000563343 SYDE2Q5VT97 1194 aa9.13□□□□□ -0.95
HERPUD1-206ENST00000563343 ADGRD2Q7Z7M1 963 aa9.13□□□□□ -0.95
HERPUD1-206ENST00000563343 ITPRIPQ8IWB1 547 aa9.13□□□□□ -0.95
HERPUD1-206ENST00000563343 IFNL3Q8IZI9 196 aa9.13□□□□□ -0.95
HERPUD1-206ENST00000563343 APPBP2Q92624 585 aa9.13□□□□□ -0.95
HERPUD1-206ENST00000563343 C11orf84Q9BUA3 381 aaPredicted RBP9.13□□□□□ -0.95
HERPUD1-206ENST00000563343 KATNAL1Q9BW62 490 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms