RNA–Protein interactions for RNA: ENST00000563130.5

CNOT1-204, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 2,280 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-204ENST00000563130 GPKOWQ92917 476 aaPredicted RBP eCLIP7.12□□□□□ -1.271e-8■■■■■ 31.5
CNOT1-204ENST00000563130 PHKBQ93100 1093 aa7.12□□□□□ -1.27
CNOT1-204ENST00000563130 KCTD12Q96CX2 325 aaKnown RBP7.12□□□□□ -1.27
CNOT1-204ENST00000563130 TBC1D32Q96NH3 1257 aa7.12□□□□□ -1.27
CNOT1-204ENST00000563130 PDCD2LQ9BRP1 358 aa7.12□□□□□ -1.27
CNOT1-204ENST00000563130 PXMP2Q9NR77 195 aa7.12□□□□□ -1.27
CNOT1-204ENST00000563130 ZHX1Q9UKY1 873 aaPredicted RBP7.12□□□□□ -1.27
CNOT1-204ENST00000563130 FAM184BQ9ULE4 1060 aa7.12□□□□□ -1.27
CNOT1-204ENST00000563130 GNEQ9Y223 722 aaKnown RBP7.12□□□□□ -1.27
CNOT1-204ENST00000563130 B4DLN1 442 aa7.12□□□□□ -1.27
CNOT1-204ENST00000563130 ADAMTS4O75173 837 aa7.12□□□□□ -1.27
CNOT1-204ENST00000563130 DUSP11O75319 330 aaKnown RBP7.12□□□□□ -1.27
CNOT1-204ENST00000563130 ZMYND10O75800 440 aa7.12□□□□□ -1.27
CNOT1-204ENST00000563130 LARGE1O95461 756 aa7.12□□□□□ -1.27
CNOT1-204ENST00000563130 NR3C2P08235 984 aa7.12□□□□□ -1.27
CNOT1-204ENST00000563130 COL6A1P12109 1028 aa7.12□□□□□ -1.27
CNOT1-204ENST00000563130 MRPL12P52815 198 aaKnown RBP7.12□□□□□ -1.27
CNOT1-204ENST00000563130 STK3Q13188 491 aa7.12□□□□□ -1.27
CNOT1-204ENST00000563130 USP17L6PQ6QN14 398 aa7.12□□□□□ -1.27
CNOT1-204ENST00000563130 EEPD1Q7L9B9 569 aa7.12□□□□□ -1.27
CNOT1-204ENST00000563130 HEATR3Q7Z4Q2 680 aa7.12□□□□□ -1.27
CNOT1-204ENST00000563130 FBXO16Q8IX29 292 aaPredicted RBP7.12□□□□□ -1.27
CNOT1-204ENST00000563130 IL27Q8NEV9 243 aa7.12□□□□□ -1.27
CNOT1-204ENST00000563130 MPHOSPH6Q99547 160 aaKnown RBP7.12□□□□□ -1.27
CNOT1-204ENST00000563130 SLKQ9H2G2 1235 aaPredicted RBP7.12□□□□□ -1.27
CNOT1-204ENST00000563130 PSTPIP2Q9H939 334 aa7.12□□□□□ -1.27
CNOT1-204ENST00000563130 PDGFCQ9NRA1 345 aa7.12□□□□□ -1.27
CNOT1-204ENST00000563130 FRMPD3Q5JV73 1810 aa7.11□□□□□ -1.27
CNOT1-204ENST00000563130 C11orf97A0A1B0GVM6 126 aaPredicted RBP7.11□□□□□ -1.27
CNOT1-204ENST00000563130 ESYT2A0FGR8 921 aa7.11□□□□□ -1.27
CNOT1-204ENST00000563130 CTAGE5O15320 804 aa7.11□□□□□ -1.27
CNOT1-204ENST00000563130 RGS20O76081 388 aa7.11□□□□□ -1.27
CNOT1-204ENST00000563130 FARP2O94887 1054 aaPredicted RBP7.11□□□□□ -1.27
CNOT1-204ENST00000563130 CTDNEP1O95476 244 aa7.11□□□□□ -1.27
CNOT1-204ENST00000563130 RARBP10826 455 aa7.11□□□□□ -1.27
CNOT1-204ENST00000563130 EIF2AK2P19525 551 aaKnown RBP7.11□□□□□ -1.27
CNOT1-204ENST00000563130 ADCYAP1R1P41586 468 aa7.11□□□□□ -1.27
CNOT1-204ENST00000563130 CLK2P49760 499 aaKnown RBP7.11□□□□□ -1.27
CNOT1-204ENST00000563130 PDE4DQ08499 809 aa7.11□□□□□ -1.27
CNOT1-204ENST00000563130 ST3GAL1Q11201 340 aa7.11□□□□□ -1.27
CNOT1-204ENST00000563130 PGM5Q15124 567 aa7.11□□□□□ -1.27
CNOT1-204ENST00000563130 RABEP1Q15276 862 aa7.11□□□□□ -1.27
CNOT1-204ENST00000563130 ANO1Q5XXA6 986 aa7.11□□□□□ -1.27
CNOT1-204ENST00000563130 IQSEC1Q6DN90 963 aa7.11□□□□□ -1.27
CNOT1-204ENST00000563130 CCSAPQ6IQ19 270 aaPredicted RBP7.11□□□□□ -1.27
CNOT1-204ENST00000563130 VSIG10LQ86VR7 867 aa7.11□□□□□ -1.27
CNOT1-204ENST00000563130 FCHSD1Q86WN1 690 aa7.11□□□□□ -1.27
CNOT1-204ENST00000563130 DIS3LQ8TF46 1054 aaKnown RBP7.11□□□□□ -1.27
CNOT1-204ENST00000563130 GTF3C6Q969F1 213 aa7.11□□□□□ -1.27
CNOT1-204ENST00000563130 LENG1Q96BZ8 264 aaPredicted RBP7.11□□□□□ -1.27
CNOT1-204ENST00000563130 ZMYND12Q9H0C1 365 aa7.11□□□□□ -1.27
CNOT1-204ENST00000563130 UPF2Q9HAU5 1272 aaKnown RBP7.11□□□□□ -1.27
CNOT1-204ENST00000563130 RIC8AQ9NPQ8 531 aa7.11□□□□□ -1.27
CNOT1-204ENST00000563130 Q9Y3F1 56 aa7.11□□□□□ -1.27
CNOT1-204ENST00000563130 DNM1LO00429 736 aa7.11□□□□□ -1.27
CNOT1-204ENST00000563130 CPLX1O14810 134 aa7.11□□□□□ -1.27
CNOT1-204ENST00000563130 PPFIA3O75145 1194 aa7.11□□□□□ -1.27
CNOT1-204ENST00000563130 EIF3JO75822 258 aaKnown RBP7.11□□□□□ -1.27
CNOT1-204ENST00000563130 DEXIO95424 95 aa7.11□□□□□ -1.27
CNOT1-204ENST00000563130 SMPD1P17405 629 aa7.11□□□□□ -1.27
CNOT1-204ENST00000563130 CST5P28325 142 aaPredicted RBP7.11□□□□□ -1.27
CNOT1-204ENST00000563130 NAPAP54920 295 aa7.11□□□□□ -1.27
CNOT1-204ENST00000563130 GJA9P57773 515 aa7.11□□□□□ -1.27
CNOT1-204ENST00000563130 LRRC41Q15345 812 aa7.11□□□□□ -1.27
CNOT1-204ENST00000563130 STXBP2Q15833 593 aa7.11□□□□□ -1.27
CNOT1-204ENST00000563130 DUSP28Q4G0W2 176 aa7.11□□□□□ -1.27
CNOT1-204ENST00000563130 TMEM63BQ5T3F8 832 aa7.11□□□□□ -1.27
CNOT1-204ENST00000563130 ARHGEF16Q5VV41 709 aa7.11□□□□□ -1.27
CNOT1-204ENST00000563130 CCDC62Q6P9F0 684 aa7.11□□□□□ -1.27
CNOT1-204ENST00000563130 KRI1Q8N9T8 703 aaKnown RBP7.11□□□□□ -1.27
CNOT1-204ENST00000563130 ARRDC4Q8NCT1 418 aa7.11□□□□□ -1.27
CNOT1-204ENST00000563130 KLHDC9Q8NEP7 349 aa7.11□□□□□ -1.27
CNOT1-204ENST00000563130 IL31RAQ8NI17 732 aa7.11□□□□□ -1.27
CNOT1-204ENST00000563130 SMARCC2Q8TAQ2 1214 aa7.11□□□□□ -1.27
CNOT1-204ENST00000563130 CUL5Q93034 780 aa7.11□□□□□ -1.27
CNOT1-204ENST00000563130 PAWRQ96IZ0 340 aaKnown RBP7.11□□□□□ -1.27
CNOT1-204ENST00000563130 SLC26A6Q9BXS9 759 aa7.11□□□□□ -1.27
CNOT1-204ENST00000563130 UPF3AQ9H1J1 476 aaKnown RBP7.11□□□□□ -1.27
CNOT1-204ENST00000563130 XPNPEP3Q9NQH7 507 aa7.11□□□□□ -1.27
CNOT1-204ENST00000563130 LIMCH1Q9UPQ0 1083 aa7.11□□□□□ -1.27
CNOT1-204ENST00000563130 STK36Q9NRP7 1315 aa7.1□□□□□ -1.27
CNOT1-204ENST00000563130 SYNRGQ9UMZ2 1314 aa7.1□□□□□ -1.27
CNOT1-204ENST00000563130 SMCO2A6NFE2 343 aa7.1□□□□□ -1.27
CNOT1-204ENST00000563130 PGK1P00558 417 aa7.1□□□□□ -1.27
CNOT1-204ENST00000563130 DNAJB2P25686 324 aa7.1□□□□□ -1.27
CNOT1-204ENST00000563130 MRPS9P82933 396 aaKnown RBP7.1□□□□□ -1.27
CNOT1-204ENST00000563130 MLLT1Q03111 559 aaPredicted RBP7.1□□□□□ -1.27
CNOT1-204ENST00000563130 TNFAIP2Q03169 654 aa7.1□□□□□ -1.27
CNOT1-204ENST00000563130 SSRP1Q08945 709 aaKnown RBP7.1□□□□□ -1.27
CNOT1-204ENST00000563130 CPLX2Q6PUV4 134 aaKnown RBP7.1□□□□□ -1.27
CNOT1-204ENST00000563130 TRIM22Q8IYM9 498 aa7.1□□□□□ -1.27
CNOT1-204ENST00000563130 FAM177A1Q8N128 213 aaPredicted RBP7.1□□□□□ -1.27
CNOT1-204ENST00000563130 SCFD2Q8WU76 684 aa7.1□□□□□ -1.27
CNOT1-204ENST00000563130 LRCH3Q96II8 777 aa7.1□□□□□ -1.27
CNOT1-204ENST00000563130 GLT8D2Q9H1C3 349 aa7.1□□□□□ -1.27
CNOT1-204ENST00000563130 SH3GLB2Q9NR46 395 aa7.1□□□□□ -1.27
CNOT1-204ENST00000563130 ADAMTS3O15072 1205 aa7.1□□□□□ -1.27
CNOT1-204ENST00000563130 STAM2O75886 525 aa7.1□□□□□ -1.27
CNOT1-204ENST00000563130 CDKL5O76039 1030 aa7.1□□□□□ -1.27
CNOT1-204ENST00000563130 ARIH2O95376 493 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms