RNA–Protein interactions for RNA: ENST00000562357.5

CMTM3-204, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 4

Gene CMTM3, Length 792 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-204ENST00000562357 CCL23P55773 120 aa20.47■□□□□ 0.87
CMTM3-204ENST00000562357 BFSP2Q13515 415 aa20.47■□□□□ 0.87
CMTM3-204ENST00000562357 MYSM1Q5VVJ2 828 aa20.47■□□□□ 0.87
CMTM3-204ENST00000562357 FAM109BQ6ICB4 259 aaPredicted RBP20.47■□□□□ 0.87
CMTM3-204ENST00000562357 PPP1R18Q6NYC8 613 aa20.47■□□□□ 0.87
CMTM3-204ENST00000562357 TEX2Q8IWB9 1127 aa20.47■□□□□ 0.87
CMTM3-204ENST00000562357 RPUSD2Q8IZ73 545 aaKnown RBP20.47■□□□□ 0.87
CMTM3-204ENST00000562357 CCDC155Q8N6L0 562 aa20.47■□□□□ 0.87
CMTM3-204ENST00000562357 C7orf31Q8N865 590 aa20.47■□□□□ 0.87
CMTM3-204ENST00000562357 RETREG2Q8NC44 543 aa20.47■□□□□ 0.87
CMTM3-204ENST00000562357 BRF1Q92994 677 aa20.47■□□□□ 0.87
CMTM3-204ENST00000562357 INPP4AQ96PE3 977 aaPredicted RBP20.47■□□□□ 0.87
CMTM3-204ENST00000562357 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.47■□□□□ 0.873e-6■■■□□ 17
CMTM3-204ENST00000562357 RTEL1Q9NZ71 1219 aa20.47■□□□□ 0.87
CMTM3-204ENST00000562357 SORBS3O60504 671 aa20.46■□□□□ 0.87
CMTM3-204ENST00000562357 CPA1P15085 419 aa20.46■□□□□ 0.87
CMTM3-204ENST00000562357 RPS6KB1P23443 525 aa20.46■□□□□ 0.87
CMTM3-204ENST00000562357 ICAM3P32942 547 aa20.46■□□□□ 0.87
CMTM3-204ENST00000562357 MRPS9P82933 396 aaKnown RBP20.46■□□□□ 0.87
CMTM3-204ENST00000562357 PTGISQ16647 500 aa20.46■□□□□ 0.87
CMTM3-204ENST00000562357 Q7L0L9 218 aa20.46■□□□□ 0.87
CMTM3-204ENST00000562357 SESTD1Q86VW0 696 aa20.46■□□□□ 0.87
CMTM3-204ENST00000562357 CDHR1Q96JP9 859 aa20.46■□□□□ 0.87
CMTM3-204ENST00000562357 GLT8D2Q9H1C3 349 aa20.46■□□□□ 0.87
CMTM3-204ENST00000562357 V9GY48 417 aaPredicted RBP20.46■□□□□ 0.87
CMTM3-204ENST00000562357 SCN10AQ9Y5Y9 1956 aa20.45■□□□□ 0.86
CMTM3-204ENST00000562357 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.45■□□□□ 0.86
CMTM3-204ENST00000562357 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.45■□□□□ 0.86
CMTM3-204ENST00000562357 F2P00734 622 aa20.45■□□□□ 0.86
CMTM3-204ENST00000562357 PFKMP08237 780 aa20.45■□□□□ 0.86
CMTM3-204ENST00000562357 ZNF286BP0CG31 522 aa20.45■□□□□ 0.86
CMTM3-204ENST00000562357 ACRP10323 421 aa20.45■□□□□ 0.86
CMTM3-204ENST00000562357 PSEN2P49810 448 aa20.45■□□□□ 0.86
CMTM3-204ENST00000562357 APOBRQ0VD83 1088 aa20.45■□□□□ 0.86
CMTM3-204ENST00000562357 MFSD10Q14728 455 aa20.45■□□□□ 0.86
CMTM3-204ENST00000562357 UBE2SQ16763 222 aa20.45■□□□□ 0.86
CMTM3-204ENST00000562357 TMEM240Q5SV17 173 aa20.45■□□□□ 0.86
CMTM3-204ENST00000562357 WWC2Q6AWC2 1192 aa20.45■□□□□ 0.86
CMTM3-204ENST00000562357 METTL7BQ6UX53 244 aa20.45■□□□□ 0.86
CMTM3-204ENST00000562357 ZNF365Q70YC5 407 aa20.45■□□□□ 0.86
CMTM3-204ENST00000562357 GIMAP8Q8ND71 665 aaPredicted RBP20.45■□□□□ 0.86
CMTM3-204ENST00000562357 ALG1Q9BT22 464 aa20.45■□□□□ 0.86
CMTM3-204ENST00000562357 UMODL1Q5DID0 1318 aa20.45■□□□□ 0.86
CMTM3-204ENST00000562357 SPATA31C2B4DYI2 1134 aa20.44■□□□□ 0.86
CMTM3-204ENST00000562357 PITPNM1O00562 1244 aa20.44■□□□□ 0.86
CMTM3-204ENST00000562357 FGBP02675 491 aa20.44■□□□□ 0.86
CMTM3-204ENST00000562357 ADCY7P51828 1080 aa20.44■□□□□ 0.86
CMTM3-204ENST00000562357 AKAP17AQ02040 695 aaKnown RBP20.44■□□□□ 0.86
CMTM3-204ENST00000562357 KIAA0753Q2KHM9 967 aa20.44■□□□□ 0.86
CMTM3-204ENST00000562357 HSDL1Q3SXM5 330 aa20.44■□□□□ 0.86
CMTM3-204ENST00000562357 PPP1R13LQ8WUF5 828 aa20.44■□□□□ 0.86
CMTM3-204ENST00000562357 KAT2BQ92831 832 aa20.44■□□□□ 0.86
CMTM3-204ENST00000562357 WNT8AQ9H1J5 351 aa20.44■□□□□ 0.86
CMTM3-204ENST00000562357 PCDHA6Q9UN73 950 aa20.44■□□□□ 0.86
CMTM3-204ENST00000562357 PCDHA8Q9Y5H6 950 aa20.44■□□□□ 0.86
CMTM3-204ENST00000562357 HOXD8P13378 290 aaPredicted RBP20.43■□□□□ 0.86
CMTM3-204ENST00000562357 RFC2P35250 354 aa20.43■□□□□ 0.86
CMTM3-204ENST00000562357 SP2Q02086 613 aa20.43■□□□□ 0.86
CMTM3-204ENST00000562357 FBXL16Q8N461 479 aa20.43■□□□□ 0.86
CMTM3-204ENST00000562357 CAGE1Q8TC20 777 aa20.43■□□□□ 0.86
CMTM3-204ENST00000562357 GPRASP2Q96D09 838 aa20.43■□□□□ 0.86
CMTM3-204ENST00000562357 SENP7Q9BQF6 1050 aa20.43■□□□□ 0.86
CMTM3-204ENST00000562357 RIC8AQ9NPQ8 531 aa20.43■□□□□ 0.86
CMTM3-204ENST00000562357 MTMR10Q9NXD2 777 aa20.43■□□□□ 0.86
CMTM3-204ENST00000562357 GTF2IRD1Q9UHL9 959 aa20.43■□□□□ 0.86
CMTM3-204ENST00000562357 SZT2Q5T011 3432 aa20.43■□□□□ 0.86
CMTM3-204ENST00000562357 FOSP01100 380 aaPredicted RBP20.42■□□□□ 0.86
CMTM3-204ENST00000562357 CDC27P30260 824 aa20.42■□□□□ 0.86
CMTM3-204ENST00000562357 FUT2Q10981 343 aa20.42■□□□□ 0.86
CMTM3-204ENST00000562357 GDF6Q6KF10 455 aaPredicted RBP20.42■□□□□ 0.86
CMTM3-204ENST00000562357 C16orf59Q7L2K0 433 aa20.42■□□□□ 0.86
CMTM3-204ENST00000562357 CYFIP1Q7L576 1253 aa20.42■□□□□ 0.86
CMTM3-204ENST00000562357 CCDC12Q8WUD4 166 aaPredicted RBP20.42■□□□□ 0.86
CMTM3-204ENST00000562357 HERVK_113Q902F9 699 aa20.42■□□□□ 0.86
CMTM3-204ENST00000562357 SCLYQ96I15 445 aa20.42■□□□□ 0.86
CMTM3-204ENST00000562357 BARHL2Q9NY43 387 aa20.42■□□□□ 0.86
CMTM3-204ENST00000562357 HDAC6Q9UBN7 1215 aa20.42■□□□□ 0.86
CMTM3-204ENST00000562357 CYP46A1Q9Y6A2 500 aa20.42■□□□□ 0.86
CMTM3-204ENST00000562357 TMEM265A0A087WTH1 108 aa20.41■□□□□ 0.86
CMTM3-204ENST00000562357 SMCO2A6NFE2 343 aa20.41■□□□□ 0.86
CMTM3-204ENST00000562357 EIF5BO60841 1220 aaKnown RBP20.41■□□□□ 0.86
CMTM3-204ENST00000562357 ACTN1P12814 892 aa20.41■□□□□ 0.86
CMTM3-204ENST00000562357 ADD1P35611 737 aaKnown RBP20.41■□□□□ 0.86
CMTM3-204ENST00000562357 MTMR1Q13613 665 aa20.41■□□□□ 0.86
CMTM3-204ENST00000562357 RUFY3Q7L099 469 aa20.41■□□□□ 0.86
CMTM3-204ENST00000562357 FAM161BQ96MY7 647 aa20.41■□□□□ 0.86
CMTM3-204ENST00000562357 USP26Q9BXU7 913 aa20.41■□□□□ 0.86
CMTM3-204ENST00000562357 FAM217BQ9NTX9 383 aaPredicted RBP20.41■□□□□ 0.86
CMTM3-204ENST00000562357 ZNF215Q9UL58 517 aaPredicted RBP20.41■□□□□ 0.86
CMTM3-204ENST00000562357 STXBP3O00186 592 aa20.4■□□□□ 0.86
CMTM3-204ENST00000562357 HAS3O00219 553 aa20.4■□□□□ 0.86
CMTM3-204ENST00000562357 LGALS2P05162 132 aa20.4■□□□□ 0.86
CMTM3-204ENST00000562357 SCG2P13521 617 aa20.4■□□□□ 0.86
CMTM3-204ENST00000562357 SP4Q02446 784 aa20.4■□□□□ 0.86
CMTM3-204ENST00000562357 AP3B2Q13367 1082 aa20.4■□□□□ 0.86
CMTM3-204ENST00000562357 PFKFB3Q16875 520 aaPredicted RBP20.4■□□□□ 0.86
CMTM3-204ENST00000562357 OTOP2Q7RTS6 562 aa20.4■□□□□ 0.86
CMTM3-204ENST00000562357 AFAP1L1Q8TED9 768 aa20.4■□□□□ 0.86
CMTM3-204ENST00000562357 AGXT2Q9BYV1 514 aa20.4■□□□□ 0.86
CMTM3-204ENST00000562357 STXBP5LQ9Y2K9 1186 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms