RNA–Protein interactions for RNA: ENST00000561976.5

VPS9D1-202, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-202ENST00000561976 HGSNATQ68CP4 663 aa15.41■□□□□ 0.06
VPS9D1-202ENST00000561976 LRRC55Q6ZSA7 311 aa15.41■□□□□ 0.06
VPS9D1-202ENST00000561976 GLIS3Q8NEA6 775 aa15.41■□□□□ 0.06
VPS9D1-202ENST00000561976 PNMA5Q96PV4 448 aa15.41■□□□□ 0.06
VPS9D1-202ENST00000561976 SPZ1Q9BXG8 430 aa15.41■□□□□ 0.06
VPS9D1-202ENST00000561976 PACSIN2Q9UNF0 486 aaPredicted RBP15.41■□□□□ 0.06
VPS9D1-202ENST00000561976 CAPN7Q9Y6W3 813 aa15.41■□□□□ 0.06
VPS9D1-202ENST00000561976 SCN7AQ01118 1682 aa15.41■□□□□ 0.06
VPS9D1-202ENST00000561976 TRAF5O00463 557 aa15.41■□□□□ 0.06
VPS9D1-202ENST00000561976 EHHADHQ08426 723 aa15.41■□□□□ 0.06
VPS9D1-202ENST00000561976 KCNMA1Q12791 1236 aa15.41■□□□□ 0.06
VPS9D1-202ENST00000561976 MCTP2Q6DN12 878 aa15.41■□□□□ 0.06
VPS9D1-202ENST00000561976 IQCKQ8N0W5 287 aa15.41■□□□□ 0.06
VPS9D1-202ENST00000561976 SNX29Q8TEQ0 813 aa15.41■□□□□ 0.06
VPS9D1-202ENST00000561976 DDX12PQ92771 950 aa15.41■□□□□ 0.06
VPS9D1-202ENST00000561976 EDEM3Q9BZQ6 932 aa15.41■□□□□ 0.06
VPS9D1-202ENST00000561976 POTEMA6NI47 508 aa15.4■□□□□ 0.06
VPS9D1-202ENST00000561976 SERPING1P05155 500 aa15.4■□□□□ 0.06
VPS9D1-202ENST00000561976 LDHBP07195 334 aaKnown RBP15.4■□□□□ 0.06
VPS9D1-202ENST00000561976 MNAT1P51948 309 aa15.4■□□□□ 0.06
VPS9D1-202ENST00000561976 POLR2FP61218 127 aaKnown RBP15.4■□□□□ 0.06
VPS9D1-202ENST00000561976 FAM83BQ5T0W9 1011 aa15.4■□□□□ 0.06
VPS9D1-202ENST00000561976 KDM7AQ6ZMT4 941 aa15.4■□□□□ 0.06
VPS9D1-202ENST00000561976 MAATS1Q7Z4T9 603 aa15.4■□□□□ 0.06
VPS9D1-202ENST00000561976 TXNRD3Q86VQ6 643 aa15.4■□□□□ 0.06
VPS9D1-202ENST00000561976 PIGSQ96S52 555 aa15.4■□□□□ 0.06
VPS9D1-202ENST00000561976 LSM14BQ9BX40 385 aaKnown RBP15.4■□□□□ 0.06
VPS9D1-202ENST00000561976 KIAA1551Q9HCM1 1747 aa15.4■□□□□ 0.06
VPS9D1-202ENST00000561976 NR1D1P20393 614 aa15.4■□□□□ 0.06
VPS9D1-202ENST00000561976 HNRNPH1P31943 449 aaKnown RBP15.4■□□□□ 0.06
VPS9D1-202ENST00000561976 LSP1P33241 339 aa15.4■□□□□ 0.06
VPS9D1-202ENST00000561976 MAPKAPK5Q8IW41 473 aa15.4■□□□□ 0.06
VPS9D1-202ENST00000561976 CASKIN2Q8WXE0 1202 aa15.4■□□□□ 0.06
VPS9D1-202ENST00000561976 TBC1D5Q92609 795 aa15.4■□□□□ 0.06
VPS9D1-202ENST00000561976 RAB34Q9BZG1 259 aa15.4■□□□□ 0.06
VPS9D1-202ENST00000561976 ANKRD2Q9GZV1 360 aa15.4■□□□□ 0.06
VPS9D1-202ENST00000561976 CENPHQ9H3R5 247 aa15.4■□□□□ 0.06
VPS9D1-202ENST00000561976 RIC8AQ9NPQ8 531 aa15.4■□□□□ 0.06
VPS9D1-202ENST00000561976 CEP72Q9P209 647 aa15.4■□□□□ 0.06
VPS9D1-202ENST00000561976 COL4A3BPQ9Y5P4 624 aa15.4■□□□□ 0.06
VPS9D1-202ENST00000561976 KLRC1P26715 233 aa15.39■□□□□ 0.05
VPS9D1-202ENST00000561976 RAPGEF1Q13905 1077 aa15.39■□□□□ 0.05
VPS9D1-202ENST00000561976 DIXDC1Q155Q3 683 aa15.39■□□□□ 0.05
VPS9D1-202ENST00000561976 KRT79Q5XKE5 535 aa15.39■□□□□ 0.05
VPS9D1-202ENST00000561976 KLHL7Q8IXQ5 586 aa15.39■□□□□ 0.05
VPS9D1-202ENST00000561976 MYOCDQ8IZQ8 938 aa15.39■□□□□ 0.05
VPS9D1-202ENST00000561976 RAD54LQ92698 747 aa15.39■□□□□ 0.05
VPS9D1-202ENST00000561976 NUCKS1Q9H1E3 243 aaKnown RBP15.39■□□□□ 0.05
VPS9D1-202ENST00000561976 BAG3O95817 575 aa15.39■□□□□ 0.05
VPS9D1-202ENST00000561976 RASA1P20936 1047 aa15.39■□□□□ 0.05
VPS9D1-202ENST00000561976 USP8P40818 1118 aa15.39■□□□□ 0.05
VPS9D1-202ENST00000561976 NT5C2P49902 561 aa15.39■□□□□ 0.05
VPS9D1-202ENST00000561976 HLTFQ14527 1009 aaKnown RBP eCLIP15.39■□□□□ 0.05
VPS9D1-202ENST00000561976 NAB2Q15742 525 aa15.39■□□□□ 0.05
VPS9D1-202ENST00000561976 KIAA0753Q2KHM9 967 aa15.39■□□□□ 0.05
VPS9D1-202ENST00000561976 CLEC4GQ6UXB4 293 aa15.39■□□□□ 0.05
VPS9D1-202ENST00000561976 MICALCLQ6ZW33 695 aa15.39■□□□□ 0.05
VPS9D1-202ENST00000561976 UBA5Q9GZZ9 404 aa15.39■□□□□ 0.05
VPS9D1-202ENST00000561976 LAMB2P55268 1798 aa15.39■□□□□ 0.05
VPS9D1-202ENST00000561976 RBAK-RBAKDNI3L0D1 243 aa15.38■□□□□ 0.05
VPS9D1-202ENST00000561976 TLR2O60603 784 aa15.38■□□□□ 0.05
VPS9D1-202ENST00000561976 TDP2O95551 362 aa15.38■□□□□ 0.05
VPS9D1-202ENST00000561976 SSBP05455 408 aaKnown RBP eCLIP15.38■□□□□ 0.05
VPS9D1-202ENST00000561976 FKBP3Q00688 224 aaKnown RBP15.38■□□□□ 0.05
VPS9D1-202ENST00000561976 CCDC24Q8N4L8 307 aa15.38■□□□□ 0.05
VPS9D1-202ENST00000561976 TAF4BQ92750 862 aa15.38■□□□□ 0.05
VPS9D1-202ENST00000561976 LRRC27Q9C0I9 530 aa15.38■□□□□ 0.05
VPS9D1-202ENST00000561976 EPN3Q9H201 632 aa15.38■□□□□ 0.05
VPS9D1-202ENST00000561976 YY1AP1Q9H869 796 aa15.38■□□□□ 0.05
VPS9D1-202ENST00000561976 ATP6V0A2Q9Y487 856 aa15.38■□□□□ 0.05
VPS9D1-202ENST00000561976 KDM4FA0A1W2PPD8 638 aa15.38■□□□□ 0.05
VPS9D1-202ENST00000561976 GRID2IPA4D2P6 1211 aa15.38■□□□□ 0.05
VPS9D1-202ENST00000561976 GOLGA6L10A6NI86 522 aa15.38■□□□□ 0.05
VPS9D1-202ENST00000561976 MEFVO15553 781 aaPredicted RBP15.38■□□□□ 0.05
VPS9D1-202ENST00000561976 SLC37A4O43826 429 aa15.38■□□□□ 0.05
VPS9D1-202ENST00000561976 TNNC1P63316 161 aa15.38■□□□□ 0.05
VPS9D1-202ENST00000561976 PSMD2Q13200 908 aa15.38■□□□□ 0.05
VPS9D1-202ENST00000561976 TRADDQ15628 312 aa15.38■□□□□ 0.05
VPS9D1-202ENST00000561976 CEP85LQ5SZL2 805 aa15.38■□□□□ 0.05
VPS9D1-202ENST00000561976 RNF187Q5TA31 235 aaPredicted RBP15.38■□□□□ 0.05
VPS9D1-202ENST00000561976 SPATS2Q86XZ4 545 aaKnown RBP15.38■□□□□ 0.05
VPS9D1-202ENST00000561976 WHAMMQ8TF30 809 aa15.38■□□□□ 0.05
VPS9D1-202ENST00000561976 ATP6V1G3Q96LB4 118 aa15.38■□□□□ 0.05
VPS9D1-202ENST00000561976 NLRP3Q96P20 1036 aa15.38■□□□□ 0.05
VPS9D1-202ENST00000561976 MTMR9Q96QG7 549 aa15.38■□□□□ 0.05
VPS9D1-202ENST00000561976 EYA3Q99504 573 aa15.38■□□□□ 0.05
VPS9D1-202ENST00000561976 NUDT12Q9BQG2 462 aa15.38■□□□□ 0.05
VPS9D1-202ENST00000561976 KANSL2Q9H9L4 492 aa15.38■□□□□ 0.05
VPS9D1-202ENST00000561976 ZNF287Q9HBT7 754 aa15.38■□□□□ 0.05
VPS9D1-202ENST00000561976 TBC1D7Q9P0N9 293 aa15.38■□□□□ 0.05
VPS9D1-202ENST00000561976 HPDP32754 393 aaPredicted RBP15.37■□□□□ 0.05
VPS9D1-202ENST00000561976 FXR2P51116 673 aaKnown RBP eCLIP15.37■□□□□ 0.05
VPS9D1-202ENST00000561976 KLHL30Q0D2K2 578 aa15.37■□□□□ 0.05
VPS9D1-202ENST00000561976 MEI1Q5TIA1 1274 aa15.37■□□□□ 0.05
VPS9D1-202ENST00000561976 NAA35Q5VZE5 725 aa15.37■□□□□ 0.05
VPS9D1-202ENST00000561976 KCNK18Q7Z418 384 aa15.37■□□□□ 0.05
VPS9D1-202ENST00000561976 PROM2Q8N271 834 aa15.37■□□□□ 0.05
VPS9D1-202ENST00000561976 PIK3R5Q8WYR1 880 aa15.37■□□□□ 0.05
VPS9D1-202ENST00000561976 ADAMTS1Q9UHI8 967 aa15.37■□□□□ 0.05
VPS9D1-202ENST00000561976 PLAAQ9Y263 795 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms