RNA–Protein interactions for RNA: ENST00000561947.5

SMG1-205, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 2,664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-205ENST00000561947 SH2D4AQ9H788 454 aa10.93□□□□□ -0.66
SMG1-205ENST00000561947 BMP2KQ9NSY1 1161 aaPredicted RBP10.93□□□□□ -0.66
SMG1-205ENST00000561947 TTC26A0AVF1 554 aa10.92□□□□□ -0.66
SMG1-205ENST00000561947 PLA2G6O60733 806 aa10.92□□□□□ -0.66
SMG1-205ENST00000561947 MED24O75448 989 aa10.92□□□□□ -0.66
SMG1-205ENST00000561947 SSBP05455 408 aaKnown RBP eCLIP10.92□□□□□ -0.66
SMG1-205ENST00000561947 CAP2P40123 477 aa10.92□□□□□ -0.66
SMG1-205ENST00000561947 GNG11P61952 73 aa10.92□□□□□ -0.66
SMG1-205ENST00000561947 LRRC63Q05C16 580 aa10.92□□□□□ -0.66
SMG1-205ENST00000561947 NAA30Q147X3 362 aaPredicted RBP10.92□□□□□ -0.66
SMG1-205ENST00000561947 CIAPIN1Q6FI81 312 aa10.92□□□□□ -0.66
SMG1-205ENST00000561947 HOMEZQ8IX15 550 aa10.92□□□□□ -0.66
SMG1-205ENST00000561947 ERMNQ8TAM6 284 aa10.92□□□□□ -0.66
SMG1-205ENST00000561947 NOC4LQ9BVI4 516 aaKnown RBP10.92□□□□□ -0.66
SMG1-205ENST00000561947 PANK4Q9NVE7 773 aa10.92□□□□□ -0.66
SMG1-205ENST00000561947 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.92□□□□□ -0.66
SMG1-205ENST00000561947 CAPN11Q9UMQ6 739 aa10.92□□□□□ -0.66
SMG1-205ENST00000561947 STK24Q9Y6E0 443 aa10.92□□□□□ -0.66
SMG1-205ENST00000561947 WNT10BO00744 389 aa10.92□□□□□ -0.66
SMG1-205ENST00000561947 FGFR1OPO95684 399 aaKnown RBP10.92□□□□□ -0.66
SMG1-205ENST00000561947 MAP3K10Q02779 954 aa10.92□□□□□ -0.66
SMG1-205ENST00000561947 NBPF9Q3BBW0 867 aa10.92□□□□□ -0.66
SMG1-205ENST00000561947 MIIPQ5JXC2 388 aa10.92□□□□□ -0.66
SMG1-205ENST00000561947 FAM160B2Q86V87 743 aa10.92□□□□□ -0.66
SMG1-205ENST00000561947 GPBP1Q86WP2 473 aa10.92□□□□□ -0.66
SMG1-205ENST00000561947 CCDC65Q8IXS2 484 aa10.92□□□□□ -0.66
SMG1-205ENST00000561947 MYOCDQ8IZQ8 938 aa10.92□□□□□ -0.66
SMG1-205ENST00000561947 EEF2KMTQ96G04 330 aa10.92□□□□□ -0.66
SMG1-205ENST00000561947 NUP58Q9BVL2 599 aa10.92□□□□□ -0.66
SMG1-205ENST00000561947 LUC7L2Q9Y383 392 aaKnown RBP10.92□□□□□ -0.66
SMG1-205ENST00000561947 ABCB11O95342 1321 aa10.92□□□□□ -0.66
SMG1-205ENST00000561947 MSH4O15457 936 aa10.92□□□□□ -0.66
SMG1-205ENST00000561947 CASQ1P31415 396 aa10.92□□□□□ -0.66
SMG1-205ENST00000561947 TBC1D8BQ0IIM8 1120 aa10.92□□□□□ -0.66
SMG1-205ENST00000561947 DALRD3Q5D0E6 543 aaKnown RBP10.92□□□□□ -0.66
SMG1-205ENST00000561947 FAM26FQ5R3K3 315 aa10.92□□□□□ -0.66
SMG1-205ENST00000561947 NCAPH2Q6IBW4 605 aa10.92□□□□□ -0.66
SMG1-205ENST00000561947 CCDC174Q6PII3 467 aa10.92□□□□□ -0.66
SMG1-205ENST00000561947 OR8K1Q8NGG5 319 aa10.92□□□□□ -0.66
SMG1-205ENST00000561947 KIFC2Q96AC6 838 aa10.92□□□□□ -0.66
SMG1-205ENST00000561947 WDR24Q96S15 920 aa10.92□□□□□ -0.66
SMG1-205ENST00000561947 DNAJC7Q99615 494 aa10.92□□□□□ -0.66
SMG1-205ENST00000561947 TSG101Q99816 390 aa10.92□□□□□ -0.66
SMG1-205ENST00000561947 TAOK3Q9H2K8 898 aa10.92□□□□□ -0.66
SMG1-205ENST00000561947 MYOZ2Q9NPC6 264 aa10.92□□□□□ -0.66
SMG1-205ENST00000561947 POTEFA5A3E0 1075 aa10.91□□□□□ -0.66
SMG1-205ENST00000561947 POTEIP0CG38 1075 aa10.91□□□□□ -0.66
SMG1-205ENST00000561947 CYP11B2P19099 503 aa10.91□□□□□ -0.66
SMG1-205ENST00000561947 ZNF76P36508 570 aa10.91□□□□□ -0.66
SMG1-205ENST00000561947 SLC12A3P55017 1021 aa10.91□□□□□ -0.66
SMG1-205ENST00000561947 LRRC41Q15345 812 aa10.91□□□□□ -0.66
SMG1-205ENST00000561947 ZYXQ15942 572 aaKnown RBP10.91□□□□□ -0.66
SMG1-205ENST00000561947 POTEGQ6S5H5 508 aa10.91□□□□□ -0.66
SMG1-205ENST00000561947 POTEEQ6S8J3 1075 aa10.91□□□□□ -0.66
SMG1-205ENST00000561947 CATSPER3Q86XQ3 398 aa10.91□□□□□ -0.66
SMG1-205ENST00000561947 PDCL2Q8N4E4 241 aa10.91□□□□□ -0.66
SMG1-205ENST00000561947 RETREG2Q8NC44 543 aa10.91□□□□□ -0.66
SMG1-205ENST00000561947 GLIS3Q8NEA6 775 aa10.91□□□□□ -0.66
SMG1-205ENST00000561947 ERGIC2Q96RQ1 377 aa10.91□□□□□ -0.66
SMG1-205ENST00000561947 TTYH3Q9C0H2 523 aa10.91□□□□□ -0.66
SMG1-205ENST00000561947 FEM1BQ9UK73 627 aa10.91□□□□□ -0.66
SMG1-205ENST00000561947 VAV3Q9UKW4 847 aa10.91□□□□□ -0.66
SMG1-205ENST00000561947 GCOM1H8Y6P7 765 aaPredicted RBP10.91□□□□□ -0.66
SMG1-205ENST00000561947 URI1O94763 535 aaPredicted RBP10.91□□□□□ -0.66
SMG1-205ENST00000561947 ASNSP08243 561 aa10.91□□□□□ -0.66
SMG1-205ENST00000561947 POLR2MP0CAP2 368 aa10.91□□□□□ -0.66
SMG1-205ENST00000561947 RPA1P27694 616 aa10.91□□□□□ -0.66
SMG1-205ENST00000561947 FKBP15Q5T1M5 1219 aa10.91□□□□□ -0.66
SMG1-205ENST00000561947 LRRC55Q6ZSA7 311 aa10.91□□□□□ -0.66
SMG1-205ENST00000561947 JDP2Q8WYK2 163 aa10.91□□□□□ -0.66
SMG1-205ENST00000561947 GLIS2Q9BZE0 524 aaPredicted RBP10.91□□□□□ -0.66
SMG1-205ENST00000561947 MRPL11Q9Y3B7 192 aaKnown RBP10.91□□□□□ -0.66
SMG1-205ENST00000561947 PCDHA2Q9Y5H9 948 aa10.91□□□□□ -0.66
SMG1-205ENST00000561947 GOLGB1Q14789 3259 aaKnown RBP10.9□□□□□ -0.66
SMG1-205ENST00000561947 PITPNM2Q9BZ72 1349 aa10.9□□□□□ -0.66
SMG1-205ENST00000561947 IGLV3-22A0A075B6J6 115 aa10.9□□□□□ -0.66
SMG1-205ENST00000561947 SHTN1A0MZ66 631 aa10.9□□□□□ -0.66
SMG1-205ENST00000561947 CFBP00751 764 aa10.9□□□□□ -0.66
SMG1-205ENST00000561947 SPATA31C1P0DKV0 1188 aa10.9□□□□□ -0.66
SMG1-205ENST00000561947 MAN2A1Q16706 1144 aa10.9□□□□□ -0.66
SMG1-205ENST00000561947 VWA3BQ502W6 1294 aa10.9□□□□□ -0.66
SMG1-205ENST00000561947 ZCWPW2Q504Y3 356 aa10.9□□□□□ -0.66
SMG1-205ENST00000561947 ACRBPQ8NEB7 543 aa10.9□□□□□ -0.66
SMG1-205ENST00000561947 LZTFL1Q9NQ48 299 aa10.9□□□□□ -0.66
SMG1-205ENST00000561947 RBBP6Q7Z6E9 1792 aaKnown RBP10.9□□□□□ -0.66
SMG1-205ENST00000561947 NPHP3-ACAD11A0A0J9YXS1 232 aa10.9□□□□□ -0.67
SMG1-205ENST00000561947 A0A0U1RQJ8 604 aa10.9□□□□□ -0.67
SMG1-205ENST00000561947 FRMD3A2A2Y4 597 aa10.9□□□□□ -0.67
SMG1-205ENST00000561947 RASSF10A6NK89 507 aa10.9□□□□□ -0.67
SMG1-205ENST00000561947 NKRFO15226 690 aaKnown RBP eCLIP10.9□□□□□ -0.67
SMG1-205ENST00000561947 ZBTB7AO95365 584 aa10.9□□□□□ -0.67
SMG1-205ENST00000561947 TRIM21P19474 475 aaKnown RBP10.9□□□□□ -0.67
SMG1-205ENST00000561947 KLK7P49862 253 aa10.9□□□□□ -0.67
SMG1-205ENST00000561947 TNIP1Q15025 636 aa10.9□□□□□ -0.67
SMG1-205ENST00000561947 KIF4BQ2VIQ3 1234 aa10.9□□□□□ -0.67
SMG1-205ENST00000561947 ARSHQ5FYA8 562 aa10.9□□□□□ -0.67
SMG1-205ENST00000561947 FIGNQ5HY92 759 aa10.9□□□□□ -0.67
SMG1-205ENST00000561947 CYP2W1Q8TAV3 490 aa10.9□□□□□ -0.67
SMG1-205ENST00000561947 ATRIPQ8WXE1 791 aa10.9□□□□□ -0.67
SMG1-205ENST00000561947 TBC1D5Q92609 795 aa10.9□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms