RNA–Protein interactions for RNA: ENST00000560549.5

TMOD3-207, Transcript of tropomodulin 3, humanhuman

TSL 1 (best)

Gene TMOD3, Length 1,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMOD3-207ENST00000560549 HCFC2Q9Y5Z7 792 aa5.78□□□□□ -1.48
TMOD3-207ENST00000560549 TRPM2O94759 1503 aa5.78□□□□□ -1.48
TMOD3-207ENST00000560549 CLTCL1P53675 1640 aa5.78□□□□□ -1.48
TMOD3-207ENST00000560549 TRPM1Q7Z4N2 1603 aa5.78□□□□□ -1.48
TMOD3-207ENST00000560549 WTIPA6NIX2 430 aaPredicted RBP5.77□□□□□ -1.49
TMOD3-207ENST00000560549 TBX1O43435 398 aa5.77□□□□□ -1.49
TMOD3-207ENST00000560549 VIPR1P32241 457 aa5.77□□□□□ -1.49
TMOD3-207ENST00000560549 HSPA1LP34931 641 aa5.77□□□□□ -1.49
TMOD3-207ENST00000560549 EPHB3P54753 998 aa5.77□□□□□ -1.49
TMOD3-207ENST00000560549 POU4F1Q01851 419 aa5.77□□□□□ -1.49
TMOD3-207ENST00000560549 RASA3Q14644 834 aa5.77□□□□□ -1.49
TMOD3-207ENST00000560549 GGT6Q6P531 493 aa5.77□□□□□ -1.49
TMOD3-207ENST00000560549 ADAT2Q7Z6V5 191 aaKnown RBP5.77□□□□□ -1.49
TMOD3-207ENST00000560549 DHX37Q8IY37 1157 aaKnown RBP5.77□□□□□ -1.49
TMOD3-207ENST00000560549 CKAP2LQ8IYA6 745 aa5.77□□□□□ -1.49
TMOD3-207ENST00000560549 NAT16Q8N8M0 369 aa5.77□□□□□ -1.49
TMOD3-207ENST00000560549 KRTAP4-9Q9BYQ8 210 aa5.77□□□□□ -1.49
TMOD3-207ENST00000560549 RGS17Q9UGC6 210 aaPredicted RBP5.77□□□□□ -1.49
TMOD3-207ENST00000560549 DIS3Q9Y2L1 958 aaKnown RBP5.77□□□□□ -1.49
TMOD3-207ENST00000560549 MSRB2Q9Y3D2 182 aa5.77□□□□□ -1.49
TMOD3-207ENST00000560549 ADGRF5Q8IZF2 1346 aa5.77□□□□□ -1.49
TMOD3-207ENST00000560549 FAM221BA6H8Z2 402 aa5.77□□□□□ -1.49
TMOD3-207ENST00000560549 BMS1Q14692 1282 aaKnown RBP5.77□□□□□ -1.49
TMOD3-207ENST00000560549 CIAPIN1Q6FI81 312 aa5.77□□□□□ -1.49
TMOD3-207ENST00000560549 RCSD1Q6JBY9 416 aa5.77□□□□□ -1.49
TMOD3-207ENST00000560549 TTLL10Q6ZVT0 673 aa5.77□□□□□ -1.49
TMOD3-207ENST00000560549 NOP9Q86U38 636 aaKnown RBP5.77□□□□□ -1.49
TMOD3-207ENST00000560549 FAM9BQ8IZU0 186 aa5.77□□□□□ -1.49
TMOD3-207ENST00000560549 RCC1LQ96I51 464 aaKnown RBP5.77□□□□□ -1.49
TMOD3-207ENST00000560549 GBP3Q9H0R5 595 aa5.77□□□□□ -1.49
TMOD3-207ENST00000560549 CNTD2Q9H8S5 307 aa5.77□□□□□ -1.49
TMOD3-207ENST00000560549 TET3O43151 1660 aa5.76□□□□□ -1.49
TMOD3-207ENST00000560549 LMTK2Q8IWU2 1503 aa5.76□□□□□ -1.49
TMOD3-207ENST00000560549 SETD1BQ9UPS6 1966 aaKnown RBP5.76□□□□□ -1.49
TMOD3-207ENST00000560549 EIF2AK4Q9P2K8 1649 aaKnown RBP5.76□□□□□ -1.49
TMOD3-207ENST00000560549 ANKRD34BA5PLL1 514 aa5.76□□□□□ -1.49
TMOD3-207ENST00000560549 NUDT19A8MXV4 375 aa5.76□□□□□ -1.49
TMOD3-207ENST00000560549 PPP1R11O60927 126 aaPredicted RBP5.76□□□□□ -1.49
TMOD3-207ENST00000560549 PPM1BO75688 479 aa5.76□□□□□ -1.49
TMOD3-207ENST00000560549 TACR1P25103 407 aa5.76□□□□□ -1.49
TMOD3-207ENST00000560549 CYP4F8P98187 520 aa5.76□□□□□ -1.49
TMOD3-207ENST00000560549 SSPNQ14714 243 aa5.76□□□□□ -1.49
TMOD3-207ENST00000560549 TNNI3KQ59H18 835 aa5.76□□□□□ -1.49
TMOD3-207ENST00000560549 HLA-DQA1Q5Y7H0 255 aa5.76□□□□□ -1.49
TMOD3-207ENST00000560549 MBLAC2Q68D91 279 aa5.76□□□□□ -1.49
TMOD3-207ENST00000560549 CYP2R1Q6VVX0 501 aa5.76□□□□□ -1.49
TMOD3-207ENST00000560549 RPTNQ6XPR3 784 aa5.76□□□□□ -1.49
TMOD3-207ENST00000560549 ZSWIM4Q9H7M6 989 aa5.76□□□□□ -1.49
TMOD3-207ENST00000560549 ACTR10Q9NZ32 417 aa5.76□□□□□ -1.49
TMOD3-207ENST00000560549 SUGT1Q9Y2Z0 365 aa5.76□□□□□ -1.49
TMOD3-207ENST00000560549 EMC9Q9Y3B6 208 aa5.76□□□□□ -1.49
TMOD3-207ENST00000560549 NPATQ14207 1427 aa5.75□□□□□ -1.49
TMOD3-207ENST00000560549 MROH2AA6NES4 1674 aa5.75□□□□□ -1.49
TMOD3-207ENST00000560549 C3P01024 1663 aa5.75□□□□□ -1.49
TMOD3-207ENST00000560549 NOP2P46087 812 aaKnown RBP5.75□□□□□ -1.49
TMOD3-207ENST00000560549 SRSF3P84103 164 aaKnown RBP5.75□□□□□ -1.49
TMOD3-207ENST00000560549 GRB10Q13322 594 aa5.75□□□□□ -1.49
TMOD3-207ENST00000560549 DDR2Q16832 855 aa5.75□□□□□ -1.49
TMOD3-207ENST00000560549 LARP1BQ659C4 914 aaKnown RBP5.75□□□□□ -1.49
TMOD3-207ENST00000560549 ZNF662Q6ZS27 426 aa5.75□□□□□ -1.49
TMOD3-207ENST00000560549 NLGN1Q8N2Q7 840 aa5.75□□□□□ -1.49
TMOD3-207ENST00000560549 MRGPRX3Q96LB0 322 aa5.75□□□□□ -1.49
TMOD3-207ENST00000560549 PANK3Q9H999 370 aa5.75□□□□□ -1.49
TMOD3-207ENST00000560549 EPB41L4AQ9HCS5 686 aaPredicted RBP5.75□□□□□ -1.49
TMOD3-207ENST00000560549 SNTG2Q9NY99 539 aa5.75□□□□□ -1.49
TMOD3-207ENST00000560549 TBX22Q9Y458 520 aa5.75□□□□□ -1.49
TMOD3-207ENST00000560549 BACE2Q9Y5Z0 518 aa5.75□□□□□ -1.49
TMOD3-207ENST00000560549 EFCAB6Q5THR3 1501 aa5.75□□□□□ -1.49
TMOD3-207ENST00000560549 RNF17Q9BXT8 1623 aaKnown RBP5.74□□□□□ -1.49
TMOD3-207ENST00000560549 CLTCQ00610 1675 aaKnown RBP5.74□□□□□ -1.49
TMOD3-207ENST00000560549 C2orf71A6NGG8 1288 aa5.74□□□□□ -1.49
TMOD3-207ENST00000560549 NUAK1O60285 661 aa5.74□□□□□ -1.49
TMOD3-207ENST00000560549 KCNH1O95259 989 aa5.74□□□□□ -1.49
TMOD3-207ENST00000560549 DBHP09172 617 aa5.74□□□□□ -1.49
TMOD3-207ENST00000560549 CDR1P51861 262 aa5.74□□□□□ -1.49
TMOD3-207ENST00000560549 AMPD2Q01433 879 aa5.74□□□□□ -1.49
TMOD3-207ENST00000560549 LAPTM5Q13571 262 aa5.74□□□□□ -1.49
TMOD3-207ENST00000560549 CBX2Q14781 532 aaPredicted RBP5.74□□□□□ -1.49
TMOD3-207ENST00000560549 SOGA3Q5TF21 947 aa5.74□□□□□ -1.49
TMOD3-207ENST00000560549 JAZF1Q86VZ6 243 aa5.74□□□□□ -1.49
TMOD3-207ENST00000560549 CPNE8Q86YQ8 564 aa5.74□□□□□ -1.49
TMOD3-207ENST00000560549 PNISRQ8TF01 805 aaKnown RBP5.74□□□□□ -1.49
TMOD3-207ENST00000560549 ST7Q9NRC1 585 aa5.74□□□□□ -1.49
TMOD3-207ENST00000560549 AKT3Q9Y243 479 aa5.74□□□□□ -1.49
TMOD3-207ENST00000560549 WASHC2CQ9Y4E1 1318 aa5.74□□□□□ -1.49
TMOD3-207ENST00000560549 ABCC3O15438 1527 aa5.74□□□□□ -1.49
TMOD3-207ENST00000560549 LAMC1P11047 1609 aa5.74□□□□□ -1.49
TMOD3-207ENST00000560549 ARNTLO00327 626 aa5.73□□□□□ -1.49
TMOD3-207ENST00000560549 ABLIM1O14639 778 aa5.73□□□□□ -1.49
TMOD3-207ENST00000560549 IRS4O14654 1257 aaPredicted RBP5.73□□□□□ -1.49
TMOD3-207ENST00000560549 GJB6O95452 261 aa5.73□□□□□ -1.49
TMOD3-207ENST00000560549 POLR1AO95602 1720 aaPredicted RBP5.73□□□□□ -1.49
TMOD3-207ENST00000560549 NOS1P29475 1434 aa5.73□□□□□ -1.49
TMOD3-207ENST00000560549 SCRN1Q12765 414 aa5.73□□□□□ -1.49
TMOD3-207ENST00000560549 ZMYM3Q14202 1370 aa5.73□□□□□ -1.49
TMOD3-207ENST00000560549 RAB3GAP1Q15042 981 aa5.73□□□□□ -1.49
TMOD3-207ENST00000560549 SPHKAPQ2M3C7 1700 aa5.73□□□□□ -1.49
TMOD3-207ENST00000560549 PLEKHN1Q494U1 663 aaPredicted RBP5.73□□□□□ -1.49
TMOD3-207ENST00000560549 ZC3H13Q5T200 1668 aaKnown RBP5.73□□□□□ -1.49
TMOD3-207ENST00000560549 EEF1DP3Q658K8 133 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms