RNA–Protein interactions for RNA: ENST00000560447.1

RTF1-206, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-206ENST00000560447 ERMNQ8TAM6 284 aa10.82□□□□□ -0.68
RTF1-206ENST00000560447 LRRC15Q8TF66 581 aa10.82□□□□□ -0.68
RTF1-206ENST00000560447 NUP88Q99567 741 aaPredicted RBP10.82□□□□□ -0.68
RTF1-206ENST00000560447 TSG101Q99816 390 aa10.82□□□□□ -0.68
RTF1-206ENST00000560447 MXD3Q9BW11 206 aa10.82□□□□□ -0.68
RTF1-206ENST00000560447 SH2D4AQ9H788 454 aa10.82□□□□□ -0.68
RTF1-206ENST00000560447 ARHGEF10LQ9HCE6 1279 aa10.82□□□□□ -0.68
RTF1-206ENST00000560447 PCDHA12Q9UN75 941 aa10.82□□□□□ -0.68
RTF1-206ENST00000560447 PCDHA1Q9Y5I3 950 aa10.82□□□□□ -0.68
RTF1-206ENST00000560447 MYMKA6NI61 221 aa10.81□□□□□ -0.68
RTF1-206ENST00000560447 F5H6K3 240 aa10.81□□□□□ -0.68
RTF1-206ENST00000560447 MARCH6O60337 910 aa10.81□□□□□ -0.68
RTF1-206ENST00000560447 CYP3A4P08684 503 aa10.81□□□□□ -0.68
RTF1-206ENST00000560447 BMP3P12645 472 aa10.81□□□□□ -0.68
RTF1-206ENST00000560447 MUTP22033 750 aa10.81□□□□□ -0.68
RTF1-206ENST00000560447 CYLC1P35663 651 aaPredicted RBP10.81□□□□□ -0.68
RTF1-206ENST00000560447 SREBF1P36956 1147 aa10.81□□□□□ -0.68
RTF1-206ENST00000560447 EIF6P56537 245 aaKnown RBP10.81□□□□□ -0.68
RTF1-206ENST00000560447 KRT83P78385 493 aa10.81□□□□□ -0.68
RTF1-206ENST00000560447 ZBED6P86452 979 aa10.81□□□□□ -0.68
RTF1-206ENST00000560447 ATP2B2Q01814 1243 aa10.81□□□□□ -0.68
RTF1-206ENST00000560447 KLRC3Q07444 240 aa10.81□□□□□ -0.68
RTF1-206ENST00000560447 STK4Q13043 487 aa10.81□□□□□ -0.68
RTF1-206ENST00000560447 MAN2A1Q16706 1144 aa10.81□□□□□ -0.68
RTF1-206ENST00000560447 SYDE2Q5VT97 1194 aa10.81□□□□□ -0.68
RTF1-206ENST00000560447 RAD9BQ6WBX8 426 aa10.81□□□□□ -0.68
RTF1-206ENST00000560447 KCTD1Q719H9 257 aa10.81□□□□□ -0.68
RTF1-206ENST00000560447 FBXO11Q86XK2 927 aa10.81□□□□□ -0.68
RTF1-206ENST00000560447 CCDC65Q8IXS2 484 aa10.81□□□□□ -0.68
RTF1-206ENST00000560447 EHBP1Q8NDI1 1231 aa10.81□□□□□ -0.68
RTF1-206ENST00000560447 SLC16A10Q8TF71 515 aa10.81□□□□□ -0.68
RTF1-206ENST00000560447 FAM151AQ8WW52 585 aa10.81□□□□□ -0.68
RTF1-206ENST00000560447 HAS1Q92839 578 aa10.81□□□□□ -0.68
RTF1-206ENST00000560447 KIFC2Q96AC6 838 aa10.81□□□□□ -0.68
RTF1-206ENST00000560447 CNOT6LQ96LI5 555 aaKnown RBP10.81□□□□□ -0.68
RTF1-206ENST00000560447 CEP63Q96MT8 703 aa10.81□□□□□ -0.68
RTF1-206ENST00000560447 HAUS4Q9H6D7 363 aa10.81□□□□□ -0.68
RTF1-206ENST00000560447 EHMT1Q9H9B1 1298 aa10.81□□□□□ -0.68
RTF1-206ENST00000560447 GINM1Q9NU53 330 aa10.81□□□□□ -0.68
RTF1-206ENST00000560447 ARGLU1Q9NWB6 273 aaPredicted RBP10.81□□□□□ -0.68
RTF1-206ENST00000560447 MRFAP1Q9Y605 127 aa10.81□□□□□ -0.68
RTF1-206ENST00000560447 TRIM49BA6NDI0 452 aa10.8□□□□□ -0.68
RTF1-206ENST00000560447 SOWAHDA6NJG2 315 aa10.8□□□□□ -0.68
RTF1-206ENST00000560447 PPIP5K2O43314 1243 aa10.8□□□□□ -0.68
RTF1-206ENST00000560447 ATP8B1O43520 1251 aa10.8□□□□□ -0.68
RTF1-206ENST00000560447 TADA3O75528 432 aa10.8□□□□□ -0.68
RTF1-206ENST00000560447 URI1O94763 535 aaPredicted RBP10.8□□□□□ -0.68
RTF1-206ENST00000560447 TUBBP07437 444 aa10.8□□□□□ -0.68
RTF1-206ENST00000560447 VIL1P09327 827 aaKnown RBP10.8□□□□□ -0.68
RTF1-206ENST00000560447 H2AFXP16104 143 aaPredicted RBP10.8□□□□□ -0.68
RTF1-206ENST00000560447 HNRNPH3P31942 346 aaKnown RBP10.8□□□□□ -0.68
RTF1-206ENST00000560447 MTIF2P46199 727 aaKnown RBP10.8□□□□□ -0.68
RTF1-206ENST00000560447 PMS1P54277 932 aaKnown RBP10.8□□□□□ -0.68
RTF1-206ENST00000560447 GOLGA8FQ08AF8 430 aa10.8□□□□□ -0.68
RTF1-206ENST00000560447 GOLGA8DPQ0D2H9 430 aa10.8□□□□□ -0.68
RTF1-206ENST00000560447 MCM6Q14566 821 aa10.8□□□□□ -0.68
RTF1-206ENST00000560447 UBE2SQ16763 222 aa10.8□□□□□ -0.68
RTF1-206ENST00000560447 ARHGAP29Q52LW3 1261 aa10.8□□□□□ -0.68
RTF1-206ENST00000560447 ANKRD40Q6AI12 368 aa10.8□□□□□ -0.68
RTF1-206ENST00000560447 RSBN1LQ6PCB5 846 aaPredicted RBP10.8□□□□□ -0.68
RTF1-206ENST00000560447 POTEEQ6S8J3 1075 aa10.8□□□□□ -0.68
RTF1-206ENST00000560447 FAM83AQ86UY5 434 aa10.8□□□□□ -0.68
RTF1-206ENST00000560447 SIAH1Q8IUQ4 282 aa10.8□□□□□ -0.68
RTF1-206ENST00000560447 ZFPM1Q8IX07 1006 aa10.8□□□□□ -0.68
RTF1-206ENST00000560447 TXLNBQ8N3L3 684 aa10.8□□□□□ -0.68
RTF1-206ENST00000560447 CEP112Q8N8E3 955 aa10.8□□□□□ -0.68
RTF1-206ENST00000560447 KIAA0895Q8NCT3 520 aa10.8□□□□□ -0.68
RTF1-206ENST00000560447 AGBL3Q8NEM8 1001 aa10.8□□□□□ -0.68
RTF1-206ENST00000560447 TSC1Q92574 1164 aa10.8□□□□□ -0.68
RTF1-206ENST00000560447 UBXN4Q92575 508 aa10.8□□□□□ -0.68
RTF1-206ENST00000560447 TTYH3Q9C0H2 523 aa10.8□□□□□ -0.68
RTF1-206ENST00000560447 NUCKS1Q9H1E3 243 aaKnown RBP10.8□□□□□ -0.68
RTF1-206ENST00000560447 OGFRQ9NZT2 677 aa10.8□□□□□ -0.68
RTF1-206ENST00000560447 RABGAP1Q9Y3P9 1069 aa10.8□□□□□ -0.68
RTF1-206ENST00000560447 TTC26A0AVF1 554 aa10.79□□□□□ -0.68
RTF1-206ENST00000560447 FRMD3A2A2Y4 597 aa10.79□□□□□ -0.68
RTF1-206ENST00000560447 SPDYE3A6NKU9 549 aa10.79□□□□□ -0.68
RTF1-206ENST00000560447 MEIS2O14770 477 aa10.79□□□□□ -0.68
RTF1-206ENST00000560447 NDUFA10O95299 355 aa10.79□□□□□ -0.68
RTF1-206ENST00000560447 NDUFB10O96000 172 aa10.79□□□□□ -0.68
RTF1-206ENST00000560447 SLC16A2P36021 539 aa10.79□□□□□ -0.68
RTF1-206ENST00000560447 MARSP56192 900 aaKnown RBP10.79□□□□□ -0.68
RTF1-206ENST00000560447 ERVK-24P63145 666 aa10.79□□□□□ -0.68
RTF1-206ENST00000560447 ARHGAP4P98171 946 aa10.79□□□□□ -0.68
RTF1-206ENST00000560447 PPP2R3AQ06190 1150 aa10.79□□□□□ -0.68
RTF1-206ENST00000560447 TBC1D8BQ0IIM8 1120 aa10.79□□□□□ -0.68
RTF1-206ENST00000560447 AOC3Q16853 763 aa10.79□□□□□ -0.68
RTF1-206ENST00000560447 FAM160B2Q86V87 743 aa10.79□□□□□ -0.68
RTF1-206ENST00000560447 CLEC10AQ8IUN9 316 aa10.79□□□□□ -0.68
RTF1-206ENST00000560447 ZC3H3Q8IXZ2 948 aaKnown RBP10.79□□□□□ -0.68
RTF1-206ENST00000560447 MYOCDQ8IZQ8 938 aa10.79□□□□□ -0.68
RTF1-206ENST00000560447 GPR161Q8N6U8 529 aaKnown RBP10.79□□□□□ -0.68
RTF1-206ENST00000560447 TTLL6Q8N841 843 aa10.79□□□□□ -0.68
RTF1-206ENST00000560447 CHURC1Q8WUH1 139 aa10.79□□□□□ -0.68
RTF1-206ENST00000560447 DDX12PQ92771 950 aa10.79□□□□□ -0.68
RTF1-206ENST00000560447 DNAJC19Q96DA6 116 aa10.79□□□□□ -0.68
RTF1-206ENST00000560447 CAMKK2Q96RR4 588 aa10.79□□□□□ -0.68
RTF1-206ENST00000560447 GMLQ99445 158 aa10.79□□□□□ -0.68
RTF1-206ENST00000560447 PLIN2Q99541 437 aa10.79□□□□□ -0.68
RTF1-206ENST00000560447 NOC4LQ9BVI4 516 aaKnown RBP10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms